BLASTX nr result

ID: Coptis21_contig00001399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001399
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana] gi|33...   133   2e-57
gb|AFS50006.1| SNARE-like protein [Dendrobium officinale]             139   3e-57
ref|XP_002332053.1| predicted protein [Populus trichocarpa] gi|2...   134   3e-57
ref|XP_002304731.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-57
gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]                 132   7e-57

>ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana]
           gi|332198292|gb|AEE36413.1| SNARE-like protein
           [Arabidopsis thaliana]
          Length = 135

 Score =  133 bits (335), Expect(2) = 2e-57
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = +2

Query: 17  MASTACFIIVSRNDIPIYEAELGSAPKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 196
           MA+TACFIIV RNDIPIYEAE+GSA K+E+AA  HQFILHAALD+VQDLAWTTSAMFLK+
Sbjct: 1   MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 197 VDRFNDLVVSVYVTA 241
           VDRFNDLVVSVYVTA
Sbjct: 61  VDRFNDLVVSVYVTA 75



 Score =  114 bits (285), Expect(2) = 2e-57
 Identities = 56/57 (98%), Positives = 56/57 (98%)
 Frame = +1

Query: 295 RLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRIPSSHFDTKVRALARKYL 465
           RLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRI SSHFDTKVRALARKYL
Sbjct: 79  RLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 135


>gb|AFS50006.1| SNARE-like protein [Dendrobium officinale]
          Length = 135

 Score =  139 bits (349), Expect(2) = 3e-57
 Identities = 69/75 (92%), Positives = 72/75 (96%)
 Frame = +2

Query: 17  MASTACFIIVSRNDIPIYEAELGSAPKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 196
           MASTACFIIV +NDIPIYEAELGSA KKEE AHQHQFILHAALDIVQDLAWTTSAMFLKA
Sbjct: 1   MASTACFIIVIKNDIPIYEAELGSAVKKEETAHQHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 197 VDRFNDLVVSVYVTA 241
           +DRFN+LVVSVYVTA
Sbjct: 61  MDRFNELVVSVYVTA 75



 Score =  108 bits (269), Expect(2) = 3e-57
 Identities = 53/57 (92%), Positives = 54/57 (94%)
 Frame = +1

Query: 295 RLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRIPSSHFDTKVRALARKYL 465
           RLMLLHDSRNED IKSFFQEVHELY+KILLNPLYLPGSRI SSH DTKVRALARKYL
Sbjct: 79  RLMLLHDSRNEDAIKSFFQEVHELYLKILLNPLYLPGSRITSSHSDTKVRALARKYL 135


>ref|XP_002332053.1| predicted protein [Populus trichocarpa] gi|222831939|gb|EEE70416.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  134 bits (336), Expect(2) = 3e-57
 Identities = 65/75 (86%), Positives = 72/75 (96%)
 Frame = +2

Query: 17  MASTACFIIVSRNDIPIYEAELGSAPKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 196
           MA+TACFIIVSR+DIPIYEAE+GSA K+E+AA  HQFILHAALDIVQDLAWTTSAM+LKA
Sbjct: 1   MATTACFIIVSRDDIPIYEAEVGSATKREDAAQMHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 197 VDRFNDLVVSVYVTA 241
           +DRFNDLVVSVYVTA
Sbjct: 61  IDRFNDLVVSVYVTA 75



 Score =  113 bits (282), Expect(2) = 3e-57
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = +1

Query: 295 RLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRIPSSHFDTKVRALARKYL 465
           RLMLLHDSRN+DGIKSFFQEVHELYIKILLNPLYLPGSRI SSHFDTKVRALARKYL
Sbjct: 79  RLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRIASSHFDTKVRALARKYL 135


>ref|XP_002304731.1| predicted protein [Populus trichocarpa] gi|222842163|gb|EEE79710.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  135 bits (339), Expect(2) = 4e-57
 Identities = 65/75 (86%), Positives = 72/75 (96%)
 Frame = +2

Query: 17  MASTACFIIVSRNDIPIYEAELGSAPKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 196
           MA+TACFIIVSRNDIPIYEAE+GSA K+E+AA  HQFILHAALDIVQDLAWTTSAM+LKA
Sbjct: 1   MATTACFIIVSRNDIPIYEAEVGSATKREDAAQMHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 197 VDRFNDLVVSVYVTA 241
           +DRFND+VVSVYVTA
Sbjct: 61  IDRFNDMVVSVYVTA 75



 Score =  111 bits (278), Expect(2) = 4e-57
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = +1

Query: 295 RLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRIPSSHFDTKVRALARKYL 465
           R MLLHDSRN+DGIKSFFQEVHELYIKILLNPLYLPGSRI SSHFDTKVRALARKYL
Sbjct: 79  RFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 135


>gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]
          Length = 135

 Score =  132 bits (333), Expect(2) = 7e-57
 Identities = 64/75 (85%), Positives = 72/75 (96%)
 Frame = +2

Query: 17  MASTACFIIVSRNDIPIYEAELGSAPKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKA 196
           MA+TACF+IV+RNDIPIYEAE+GSA K+E+AA  HQFILHAALD+VQDLAWTTSAMFLK+
Sbjct: 1   MANTACFMIVARNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 197 VDRFNDLVVSVYVTA 241
           VDRFNDLVVSVYVTA
Sbjct: 61  VDRFNDLVVSVYVTA 75



 Score =  113 bits (282), Expect(2) = 7e-57
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = +1

Query: 295 RLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRIPSSHFDTKVRALARKYL 465
           RLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRI S+HFDTKVRALARKYL
Sbjct: 79  RLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITSTHFDTKVRALARKYL 135


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