BLASTX nr result

ID: Coptis21_contig00001391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001391
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314144.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-19
ref|XP_002520485.1| conserved hypothetical protein [Ricinus comm...    87   2e-19
ref|XP_002281905.1| PREDICTED: uncharacterized protein LOC100263...    92   3e-18
ref|XP_003623159.1| hypothetical protein MTR_7g065150 [Medicago ...    98   4e-18
emb|CBI31586.3| unnamed protein product [Vitis vinifera]               88   1e-17

>ref|XP_002314144.1| predicted protein [Populus trichocarpa] gi|222850552|gb|EEE88099.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 85.9 bits (211), Expect(2) = 1e-19
 Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
 Frame = -3

Query: 602 NKGQSSIFQDERVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGENDDPDG---- 435
           +K ++S+ Q+ERVEP +LSSS++YG Q+ YS   +T+ +     +KKDG  DDP+G    
Sbjct: 89  DKDRNSVIQEERVEPCHLSSSLYYGGQENYSQSPSTQMAGSYPIFKKDGGEDDPNGSNPH 148

Query: 434 SASRGNWWQGSLYY 393
           SASRGNWWQGSLYY
Sbjct: 149 SASRGNWWQGSLYY 162



 Score = 38.1 bits (87), Expect(2) = 1e-19
 Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
 Frame = -2

Query: 756 FDSVFAHPSTY-----SRSEVIGSWRKQDSGNQEW-NKQDSTGNA 640
           F S+F  PST      S SEV GSW+KQ  GNQ W  KQ S  N+
Sbjct: 36  FASMFPPPSTVVGRKSSGSEVTGSWQKQSYGNQAWYPKQGSPANS 80


>ref|XP_002520485.1| conserved hypothetical protein [Ricinus communis]
           gi|223540327|gb|EEF41898.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 160

 Score = 86.7 bits (213), Expect(2) = 2e-19
 Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
 Frame = -3

Query: 626 ECQGQNASNKGQSSIFQDERVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGEND 447
           E    N  NK ++S   +ER EP +LSSS++YG QD YS   ++R+S     +KKDG +D
Sbjct: 79  EAASYNMPNKDRNSTLMEERGEPCHLSSSLYYGGQDNYSQPPSSRNSGSYPIFKKDGVDD 138

Query: 446 DPDGS----ASRGNWWQGSLYY 393
           DP+G+    ASRGNWWQGSLYY
Sbjct: 139 DPNGNNSNGASRGNWWQGSLYY 160



 Score = 36.6 bits (83), Expect(2) = 2e-19
 Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
 Frame = -2

Query: 756 FDSVFAHPSTY-----SRSEVIGSWRKQDSGNQEWN 664
           F S+F  PS       S SEVIGSW++Q S NQ WN
Sbjct: 33  FASIFPPPSKVLGRKSSGSEVIGSWQRQSSENQGWN 68


>ref|XP_002281905.1| PREDICTED: uncharacterized protein LOC100263768 [Vitis vinifera]
           gi|297745986|emb|CBI16042.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score = 91.7 bits (226), Expect(2) = 3e-18
 Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 4/74 (5%)
 Frame = -3

Query: 602 NKGQSSIFQDERVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGENDDPDGS--- 432
           NK ++ IFQ+ERVEP +LSSS++YG QD+YSN S+T++S     +KKD   DDP+G+   
Sbjct: 83  NKDKNQIFQEERVEPCHLSSSLYYGGQDIYSNSSSTQTSGSYPVFKKD--EDDPNGNNSQ 140

Query: 431 -ASRGNWWQGSLYY 393
            ASRGNWWQGSLYY
Sbjct: 141 GASRGNWWQGSLYY 154



 Score = 27.7 bits (60), Expect(2) = 3e-18
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -2

Query: 756 FDSVFAHPSTYSRSEVIGSWRKQDSGNQEWNKQDSTGNASQTTGVSGAKCIKQRPK 589
           F S+F  PST        S  +  SGNQ W+ +  T +  + +GV  +  I  + K
Sbjct: 32  FASIFPPPSTAVGRNPANSEMRGLSGNQTWDTKQGTPDMGK-SGVGASSIIPNKDK 86


>ref|XP_003623159.1| hypothetical protein MTR_7g065150 [Medicago truncatula]
           gi|355498174|gb|AES79377.1| hypothetical protein
           MTR_7g065150 [Medicago truncatula]
           gi|388492720|gb|AFK34426.1| unknown [Medicago
           truncatula]
          Length = 156

 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 53/109 (48%), Positives = 71/109 (65%)
 Frame = -3

Query: 719 ALR*LGHGESRIQGIRSGTNKILQEMLHRPLECQGQNASNKGQSSIFQDERVEPHYLSSS 540
           +LR   +G++  +G  S  +   QE + +  + + QN +NK  S I+Q++RV+P +LSSS
Sbjct: 51  SLRSAMNGKTATEGSNSKIDT--QEYISKGNDGETQNKTNKDMSYIYQEQRVQPCHLSSS 108

Query: 539 IFYGAQDVYSNQSTTRSSVPAQTYKKDGENDDPDGSASRGNWWQGSLYY 393
           I+YG QDVYS   + R S     YKKDG  DD  GSASRGNWWQGSLYY
Sbjct: 109 IYYGGQDVYSRPQSARDSGLNTMYKKDGGEDD-SGSASRGNWWQGSLYY 156


>emb|CBI31586.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score = 87.8 bits (216), Expect(2) = 1e-17
 Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
 Frame = -3

Query: 623 CQGQNASNKGQSSIFQDERVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGENDD 444
           C G+++ ++G  SI+ +E VEP Y SSSI+YG Q+VYS  +    S P  T KKDG  DD
Sbjct: 82  CSGESSKDRG--SIYHNETVEPCYFSSSIYYGGQEVYSPNARNTESHPIVTMKKDGGEDD 139

Query: 443 PDG----SASRGNWWQGSLYY 393
            +G    SASRGNWWQGSLYY
Sbjct: 140 LNGSNSNSASRGNWWQGSLYY 160



 Score = 29.6 bits (65), Expect(2) = 1e-17
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = -2

Query: 756 FDSVFAHPSTY-----SRSEVIGSWRKQDSGNQEWNKQDST 649
           F S+F  PS+      S +  IGS+RKQ SGNQ  N +  T
Sbjct: 34  FGSIFQPPSSVPGRNSSHTGNIGSFRKQGSGNQVGNGKHGT 74


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