BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001384
         (1634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   585   e-165
ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   584   e-164
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   575   e-162
ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   572   e-160
ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like i...   565   e-159

>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  585 bits (1509), Expect = e-165
 Identities = 298/406 (73%), Positives = 321/406 (79%)
 Frame = -2

Query: 1618 MATAAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVS 1439
            MA AAARPLVTVQ L+ +M TDG N++PLPDVMKASIRPDIV +VHSNISKNSRQPYAVS
Sbjct: 1    MAAAAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVS 60

Query: 1438 RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKI 1259
            RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKI
Sbjct: 61   RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 1258 NINQKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIG 1079
            N+NQKRY                ARGH+IE+VPE+PLV+GDSAE VEKTSAAI +LKQ+G
Sbjct: 121  NVNQKRYAVVSAIAASAIPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVG 180

Query: 1078 AYADAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVER 899
            AY DAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANV+R
Sbjct: 181  AYPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDR 240

Query: 898  LNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGLFDKPSEKKKGYVLPRSKMVNADLSRIIN 719
            LNLLKLAPGGHLGRF+IWTKSAFEKLDSIYG F+K SEKK GY+LPRSKMVNADL+RIIN
Sbjct: 241  LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNADLARIIN 300

Query: 718  SDEVQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXX 539
            SDEVQSVVRPI  EVKRAPM               PYAKT                    
Sbjct: 301  SDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKQEKL 360

Query: 538  XXXXXXVPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 401
                  +P            AWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361  DKKRKQIPKEEVAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406


>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  584 bits (1506), Expect = e-164
 Identities = 298/403 (73%), Positives = 320/403 (79%)
 Frame = -2

Query: 1609 AAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRA 1430
            AAARPLVTVQ L+ +M TDG N++PLPDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRA
Sbjct: 3    AAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRA 62

Query: 1429 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININ 1250
            GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+N
Sbjct: 63   GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 1249 QKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYA 1070
            QKRY                ARGH+IE+VPE+PLV+GDSAE VEKTSAAI +LKQ+GAY 
Sbjct: 123  QKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYP 182

Query: 1069 DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 890
            DAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANVERLNL
Sbjct: 183  DAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNL 242

Query: 889  LKLAPGGHLGRFIIWTKSAFEKLDSIYGLFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 710
            LKLAPGGHLGRFIIWTKSA EK+DSIYG FDK SEKKKGY+LPR+KMVNADL+RIINSDE
Sbjct: 243  LKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINSDE 302

Query: 709  VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 530
            VQSVVRPI  EVKRAPM               PYAKT                       
Sbjct: 303  VQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKK 362

Query: 529  XXXVPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 401
               +P            AWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 363  RAQIPKEEAAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  575 bits (1483), Expect = e-162
 Identities = 293/403 (72%), Positives = 317/403 (78%)
 Frame = -2

Query: 1609 AAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRA 1430
            AAARPLVTVQ L+G+M TD S ++P+PDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRA
Sbjct: 3    AAARPLVTVQALDGDMATDASATVPIPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRA 62

Query: 1429 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININ 1250
            GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+N
Sbjct: 63   GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 1249 QKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYA 1070
            QKRY                ARGH+IE+VPE+PLVV DSAEGVEKT  AIKVLKQIGA+ 
Sbjct: 123  QKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAEGVEKTKEAIKVLKQIGAFP 182

Query: 1069 DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 890
            DAEKAKDS  IRPGKGKMRNRRY+S++GPL+VYGTEG+K VKAFRN+PGVEVANVERLNL
Sbjct: 183  DAEKAKDSRSIRPGKGKMRNRRYISRRGPLVVYGTEGAKAVKAFRNVPGVEVANVERLNL 242

Query: 889  LKLAPGGHLGRFIIWTKSAFEKLDSIYGLFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 710
            LKLAPGGHLGRF+IWTKSAFEKLDSIYG FDKPSEKKKGY+LPRSKMVN+DLSRIINSDE
Sbjct: 243  LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNSDLSRIINSDE 302

Query: 709  VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 530
            VQSVVRPI  +VKRA +               PYAKT                       
Sbjct: 303  VQSVVRPIKKDVKRATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKVKKEKLDKK 362

Query: 529  XXXVPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 401
               V             AWY TM+SDSDYTEFDNFSKWLGVSQ
Sbjct: 363  RKTVSKEEASAIKAAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405


>ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
            gi|449520008|ref|XP_004167026.1| PREDICTED: 60S ribosomal
            protein L4-like [Cucumis sativus]
          Length = 405

 Score =  572 bits (1473), Expect = e-160
 Identities = 292/403 (72%), Positives = 316/403 (78%)
 Frame = -2

Query: 1609 AAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRA 1430
            AAARPLV+VQ LEG+M TD + ++PLPDVMKASIRPDIV++VHSNISKNSRQPYAVS+RA
Sbjct: 3    AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 1429 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININ 1250
            GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+N
Sbjct: 63   GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 1249 QKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYA 1070
            QKRY                ARGH+IE VPE+PLVV DSAEGVEKTSAAIKVLKQ+GA+ 
Sbjct: 123  QKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 1069 DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 890
            DAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVE+ANVERLNL
Sbjct: 183  DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 889  LKLAPGGHLGRFIIWTKSAFEKLDSIYGLFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 710
            LKLAPGGHLGRF+IWTKSAFEKLDSIYG F+K SEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243  LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 709  VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 530
            VQSVV+PI   VKR  +               PYAKT                       
Sbjct: 303  VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 529  XXXVPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 401
                             AWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363  RNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405


>ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Glycine max]
          Length = 405

 Score =  565 bits (1457), Expect = e-159
 Identities = 287/403 (71%), Positives = 314/403 (77%)
 Frame = -2

Query: 1609 AAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRA 1430
            AAARPLVTVQ L+ +M TD S ++P+PDVMK+SIRPDIVN+VHSNISKNSRQPYAVSRRA
Sbjct: 3    AAARPLVTVQALDSDMATDASATVPIPDVMKSSIRPDIVNFVHSNISKNSRQPYAVSRRA 62

Query: 1429 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININ 1250
            GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+N
Sbjct: 63   GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 1249 QKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYA 1070
            QKRY                ARGH+IE+VPE+PLVV DSAE VEKT  AIKVLKQIGA+ 
Sbjct: 123  QKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAESVEKTKEAIKVLKQIGAFP 182

Query: 1069 DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 890
            DAEKAKDS  IRPGKGKMRNRRY+S++GPLIVYGTEG+K VKAFRN+PGVEVANVERLNL
Sbjct: 183  DAEKAKDSRSIRPGKGKMRNRRYISRRGPLIVYGTEGAKAVKAFRNVPGVEVANVERLNL 242

Query: 889  LKLAPGGHLGRFIIWTKSAFEKLDSIYGLFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 710
            LKLAPGGHLGRF++WTKSAFEKLDSIYG FDKPSEKKKGY+LPR KMVN+DL+RIINSDE
Sbjct: 243  LKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRPKMVNSDLARIINSDE 302

Query: 709  VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 530
            VQSVVRPI  +VK+A +               PYAKT                       
Sbjct: 303  VQSVVRPIKKDVKKATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKAKKEKLDKK 362

Query: 529  XXXVPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 401
               V             AWY TM+SDSDYTEFDNFSKWLGVSQ
Sbjct: 363  RKTVSKEEASAIKSAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405