BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001383
         (1614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   583   e-164
ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   581   e-163
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   573   e-161
ref|XP_004137800.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   567   e-159
sp|Q9XF97.1|RL4_PRUAR RecName: Full=60S ribosomal protein L4; Al...   564   e-158

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  583 bits (1504), Expect = e-164
 Identities = 297/400 (74%), Positives = 317/400 (79%)
 Frame = -2

Query: 1568 RPLVTVQKLEGEMETDGSNTLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1389
            RPLVTVQ L+ +M TDG N +PLPDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRAGHQ
Sbjct: 6    RPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRAGHQ 65

Query: 1388 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1209
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 66   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 125

Query: 1208 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYADAE 1029
            Y                ARGH+IE+VPE+PLV+GDSAE VEKTSAAI +LKQ+GAY DAE
Sbjct: 126  YAVVSAIAASAVPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYPDAE 185

Query: 1028 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 849
            KAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANVERLNLLKL
Sbjct: 186  KAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNLLKL 245

Query: 848  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 669
            APGGHLGRFIIWTKSA EK+DSIYGSFDK SEKKKGY+LPR+KMVNADL+RIINSDEVQS
Sbjct: 246  APGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINSDEVQS 305

Query: 668  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 489
            VVRPI  EVKRAPM               PYAKT                          
Sbjct: 306  VVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKRAQ 365

Query: 488  IPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 369
            IP            AWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 366  IPKEEAAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405


>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  581 bits (1498), Expect = e-163
 Identities = 296/400 (74%), Positives = 317/400 (79%)
 Frame = -2

Query: 1568 RPLVTVQKLEGEMETDGSNTLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1389
            RPLVTVQ L+ +M TDG N +PLPDVMKASIRPDIV +VHSNISKNSRQPYAVSRRAGHQ
Sbjct: 7    RPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVSRRAGHQ 66

Query: 1388 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1209
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 67   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 126

Query: 1208 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYADAE 1029
            Y                ARGH+IE+VPE+PLV+GDSAE VEKTSAAI +LKQ+GAY DAE
Sbjct: 127  YAVVSAIAASAIPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYPDAE 186

Query: 1028 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 849
            KAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANV+RLNLLKL
Sbjct: 187  KAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDRLNLLKL 246

Query: 848  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 669
            APGGHLGRF+IWTKSAFEKLDSIYGSF+K SEKK GY+LPRSKMVNADL+RIINSDEVQS
Sbjct: 247  APGGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNADLARIINSDEVQS 306

Query: 668  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 489
            VVRPI  EVKRAPM               PYAKT                        K 
Sbjct: 307  VVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKQEKLDKKRKQ 366

Query: 488  IPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 369
            IP            AWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 367  IPKEEVAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  573 bits (1478), Expect = e-161
 Identities = 291/400 (72%), Positives = 315/400 (78%)
 Frame = -2

Query: 1568 RPLVTVQKLEGEMETDGSNTLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1389
            RPLVTVQ L+G+M TD S T+P+PDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRAGHQ
Sbjct: 6    RPLVTVQALDGDMATDASATVPIPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRAGHQ 65

Query: 1388 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1209
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 66   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 125

Query: 1208 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYADAE 1029
            Y                ARGH+IE+VPE+PLVV DSAEGVEKT  AIKVLKQIGA+ DAE
Sbjct: 126  YAVVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAEGVEKTKEAIKVLKQIGAFPDAE 185

Query: 1028 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 849
            KAKDS  IRPGKGKMRNRRY+S++GPL+VYGTEG+K VKAFRN+PGVEVANVERLNLLKL
Sbjct: 186  KAKDSRSIRPGKGKMRNRRYISRRGPLVVYGTEGAKAVKAFRNVPGVEVANVERLNLLKL 245

Query: 848  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 669
            APGGHLGRF+IWTKSAFEKLDSIYGSFDK SEKKKGY+LPRSKMVN+DLSRIINSDEVQS
Sbjct: 246  APGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNSDLSRIINSDEVQS 305

Query: 668  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 489
            VVRPI  +VKRA +               PYAKT                        K 
Sbjct: 306  VVRPIKKDVKRATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKVKKEKLDKKRKT 365

Query: 488  IPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 369
            +             AWY TM+SDSDYTEFDNFSKWLGVSQ
Sbjct: 366  VSKEEASAIKAAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405


>ref|XP_004137800.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
            gi|449519122|ref|XP_004166584.1| PREDICTED: 60S ribosomal
            protein L4-like [Cucumis sativus]
          Length = 405

 Score =  567 bits (1462), Expect = e-159
 Identities = 286/400 (71%), Positives = 315/400 (78%)
 Frame = -2

Query: 1568 RPLVTVQKLEGEMETDGSNTLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1389
            RPLV VQ LEG+M TD S T+PLPDVMKASIRPDIV++VHSNISKNSRQPYAVS+RAGHQ
Sbjct: 6    RPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQ 65

Query: 1388 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1209
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 66   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 125

Query: 1208 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYADAE 1029
            Y                ARGH+IE+VPE+PLV+ DSAEG+EKTS+AIKVLKQ+GA  DAE
Sbjct: 126  YAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGALPDAE 185

Query: 1028 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 849
            KAKDS  IR GKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPG+++ NVERLNLLKL
Sbjct: 186  KAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLNLLKL 245

Query: 848  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 669
            APGGHLGRF+IWTK+AFEKLDSIYGSF+K+SEKKKGYVLPRSKMVNADL+RIINSDEVQS
Sbjct: 246  APGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSDEVQS 305

Query: 668  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 489
            VV+PI   VKR  +               PYAKT                         +
Sbjct: 306  VVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRGI 365

Query: 488  IPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 369
            IP            AWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 366  IPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405


>sp|Q9XF97.1|RL4_PRUAR RecName: Full=60S ribosomal protein L4; AltName: Full=L1
            gi|4887131|gb|AAD32206.1|AF134732_1 60S ribosomal protein
            L1 [Prunus armeniaca]
          Length = 408

 Score =  564 bits (1454), Expect = e-158
 Identities = 287/400 (71%), Positives = 312/400 (78%)
 Frame = -2

Query: 1568 RPLVTVQKLEGEMETDGSNTLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1389
            RPLVTVQ LEG+M TD + T+ LPDVMKASIRPDIV +VHSNISKNSRQPYAVS++AGHQ
Sbjct: 9    RPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKKAGHQ 68

Query: 1388 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1209
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 69   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 128

Query: 1208 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYADAE 1029
            Y                ARGHKIE VPE+PLVV DS EGVE+TSAA+KVLKQIGAY+DAE
Sbjct: 129  YAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGAYSDAE 188

Query: 1028 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 849
            KAKDS  IRPGKGKMRNRRY+++KGPLIVYGTEG+K+VKAFRNIPG+++ NVERLNLLKL
Sbjct: 189  KAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLNLLKL 248

Query: 848  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 669
            APGGHLGRF++WTKSAFEKLDSIYGSFDK SEKK GYVLPRSKMVNADL+RIINSDEVQS
Sbjct: 249  APGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINSDEVQS 308

Query: 668  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 489
            VV PI    KRAP+               PYAKT                        K 
Sbjct: 309  VVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLDKKRKP 368

Query: 488  IPXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 369
            I             AWYQTMISDSDYTEFDNF+KWLGVSQ
Sbjct: 369  ISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408