BLASTX nr result

ID: Coptis21_contig00001378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001378
         (2593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59808.1| hypothetical protein VITISV_006626 [Vitis vinifera]   454   e-125
ref|XP_003632837.1| PREDICTED: LOW QUALITY PROTEIN: arogenate de...   452   e-124
gb|ABK24346.1| unknown [Picea sitchensis]                             446   e-122
ref|XP_003525645.1| PREDICTED: arogenate dehydrogenase 1, chloro...   442   e-121
ref|XP_002530754.1| prephenate dehydrogenase, putative [Ricinus ...   440   e-121

>emb|CAN59808.1| hypothetical protein VITISV_006626 [Vitis vinifera]
          Length = 379

 Score =  454 bits (1167), Expect = e-125
 Identities = 214/294 (72%), Positives = 257/294 (87%)
 Frame = +2

Query: 1370 NLRVRAIDAAQPFDLEAKRYEHFEKSTRLKIGIVGFGNFGQFLAKTLVKQGHTVLAHSRS 1549
            +L++ AIDAAQP+D E +    F KS  LKI I+GFGNFGQFLAKT VKQGHTVLAHSRS
Sbjct: 46   SLQITAIDAAQPYDYETQLRTQFNKSNNLKIAIIGFGNFGQFLAKTFVKQGHTVLAHSRS 105

Query: 1550 DYSDIARELGVSFFSDPNDLCEEHPEVILLCSSIVSTKAVLQSIPFQRLKRSTLFVDVLS 1729
            +Y D+AR+LGVSFF DP+DLCEEHPEV+LLCSSI+STK+VL+S+PFQRL+R+TLFVDVLS
Sbjct: 106  NYVDVARKLGVSFFQDPHDLCEEHPEVVLLCSSILSTKSVLKSLPFQRLRRNTLFVDVLS 165

Query: 1730 VKEFPRDLFLKVLPPEFDILCTHPMFGPESGRDGWQGLNFVYEKVRIGIEESRINRCDRF 1909
            VKEFPR+LFL+ LP EFDILCTHPMFGPESG++GW GL FVY+KVRIG +E R+ RC +F
Sbjct: 166  VKEFPRNLFLETLPAEFDILCTHPMFGPESGKNGWAGLPFVYDKVRIGNDEFRMARCSKF 225

Query: 1910 LNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRVLEKFGVESTPINTKGYESLLNLVS 2089
            L+IFA+EGC M EM+C EHD++AA SQFITH MGRVLE+FG+EST INTKGYE+LLNLV 
Sbjct: 226  LDIFAREGCRMVEMTCAEHDKYAAGSQFITHTMGRVLERFGLESTEINTKGYETLLNLVE 285

Query: 2090 NTSGDSFELFYGLFIYNKNSLEQLERLDMAFESVKKLLFGKTHNVVREQLFPKE 2251
            NT+GDSF+L+YGLF+YN N++EQLERLDMAFES+KK +FG  H + R+QLF  E
Sbjct: 286  NTAGDSFDLYYGLFVYNNNAMEQLERLDMAFESIKKEIFGYMHRLYRKQLFEDE 339


>ref|XP_003632837.1| PREDICTED: LOW QUALITY PROTEIN: arogenate dehydrogenase 1,
            chloroplastic-like [Vitis vinifera]
          Length = 686

 Score =  452 bits (1164), Expect = e-124
 Identities = 214/290 (73%), Positives = 254/290 (87%)
 Frame = +2

Query: 1382 RAIDAAQPFDLEAKRYEHFEKSTRLKIGIVGFGNFGQFLAKTLVKQGHTVLAHSRSDYSD 1561
            RAIDAAQP+D E +    F KS  LKI I+GFGNFGQFLAKT VKQGHTVLAHSRS+Y D
Sbjct: 350  RAIDAAQPYDYETQLRTQFNKSNNLKIAIIGFGNFGQFLAKTFVKQGHTVLAHSRSNYVD 409

Query: 1562 IARELGVSFFSDPNDLCEEHPEVILLCSSIVSTKAVLQSIPFQRLKRSTLFVDVLSVKEF 1741
            +AR+LGVSFF DP+DLCEEHPEV+LLCSSI+STK+VL+S+PFQRL+R+TLFVDVLSVKEF
Sbjct: 410  VARKLGVSFFQDPHDLCEEHPEVVLLCSSILSTKSVLKSLPFQRLRRNTLFVDVLSVKEF 469

Query: 1742 PRDLFLKVLPPEFDILCTHPMFGPESGRDGWQGLNFVYEKVRIGIEESRINRCDRFLNIF 1921
            PR+LFL+ LP EFDILCTHPMFGPESG++GW GL FVY+KVRIG +E R+ RC +FL+IF
Sbjct: 470  PRNLFLETLPAEFDILCTHPMFGPESGKNGWAGLPFVYDKVRIGNDEFRMARCSKFLDIF 529

Query: 1922 AQEGCNMKEMSCGEHDRHAAESQFITHVMGRVLEKFGVESTPINTKGYESLLNLVSNTSG 2101
            A+EGC M EM+C EHD++AA SQFITH MGRVLE+FG+EST INTKGYE+LLNLV NT+G
Sbjct: 530  AREGCRMVEMTCAEHDKYAAGSQFITHTMGRVLERFGLESTEINTKGYETLLNLVENTAG 589

Query: 2102 DSFELFYGLFIYNKNSLEQLERLDMAFESVKKLLFGKTHNVVREQLFPKE 2251
            DSF+L+YGLF+YN N++EQLERLDMAFES+KK +FG  H + R+QLF  E
Sbjct: 590  DSFDLYYGLFVYNNNAMEQLERLDMAFESIKKEIFGYMHRLYRKQLFEDE 639



 Score =  403 bits (1036), Expect = e-109
 Identities = 189/294 (64%), Positives = 242/294 (82%)
 Frame = +2

Query: 1370 NLRVRAIDAAQPFDLEAKRYEHFEKSTRLKIGIVGFGNFGQFLAKTLVKQGHTVLAHSRS 1549
            +L+++A++A+  +    +   H +  T LKI I+GFGN  QFLAK  V QGHTVLAHSRS
Sbjct: 30   SLQIKAMEASLDYHFGTQLQTHIKTPTSLKIAIIGFGNVAQFLAKAFVSQGHTVLAHSRS 89

Query: 1550 DYSDIARELGVSFFSDPNDLCEEHPEVILLCSSIVSTKAVLQSIPFQRLKRSTLFVDVLS 1729
            D+SD A +LGVSFF+DP+DLCEEHPEV++LC+SI+STK+VL+SIPFQRL+RSTLFVDVLS
Sbjct: 90   DHSDTAAKLGVSFFNDPHDLCEEHPEVVMLCTSILSTKSVLESIPFQRLRRSTLFVDVLS 149

Query: 1730 VKEFPRDLFLKVLPPEFDILCTHPMFGPESGRDGWQGLNFVYEKVRIGIEESRINRCDRF 1909
            VKEFPR LFL++LP EFDILCTHPM GPESG+ GW GL F+Y+KVRIG ++ RI+RC RF
Sbjct: 150  VKEFPRSLFLEILPEEFDILCTHPMLGPESGKKGWAGLPFMYDKVRIGNDDIRISRCGRF 209

Query: 1910 LNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRVLEKFGVESTPINTKGYESLLNLVS 2089
            L++FA+EGC M EMSC +HD++AAESQFITH MGR+LE+FG ES+ INTKGYE+LL L+ 
Sbjct: 210  LDVFAREGCRMVEMSCADHDKYAAESQFITHTMGRILERFGFESSSINTKGYETLLKLME 269

Query: 2090 NTSGDSFELFYGLFIYNKNSLEQLERLDMAFESVKKLLFGKTHNVVREQLFPKE 2251
            NT+ DSF+L+YGL +YN N++EQLE+L+ AF+SVK+ L G   ++   QLF  E
Sbjct: 270  NTAKDSFDLYYGLSMYNSNAMEQLEKLESAFQSVKRELSGNLQSLYSRQLFEDE 323


>gb|ABK24346.1| unknown [Picea sitchensis]
          Length = 394

 Score =  446 bits (1146), Expect = e-122
 Identities = 217/325 (66%), Positives = 266/325 (81%), Gaps = 4/325 (1%)
 Frame = +2

Query: 1280 RVIIPSSLWTSSVPKIFTFNYKKVQTS----YFPNLRVRAIDAAQPFDLEAKRYEHFEKS 1447
            R  IP+ +W S     F F+ +K Q         +L+++A+DAAQPFD E K+ E  EK+
Sbjct: 29   RPFIPTRIWNSR--STFPFSVRKKQNRERSFVLRHLKIKALDAAQPFDYEFKKSEVLEKN 86

Query: 1448 TRLKIGIVGFGNFGQFLAKTLVKQGHTVLAHSRSDYSDIARELGVSFFSDPNDLCEEHPE 1627
            + LKIGIVGFGNFGQFLAKTLVKQGHTVLAHSR+D+ ++AR++GVSFF D +D CEEHPE
Sbjct: 87   SLLKIGIVGFGNFGQFLAKTLVKQGHTVLAHSRTDHGEVARKIGVSFFKDADDFCEEHPE 146

Query: 1628 VILLCSSIVSTKAVLQSIPFQRLKRSTLFVDVLSVKEFPRDLFLKVLPPEFDILCTHPMF 1807
            VILLCSSI++T++VL+S P QRLKR+TLF DVLSVKEFPR+LF ++LPPEFDILCTHPMF
Sbjct: 147  VILLCSSIIATESVLRSFPTQRLKRNTLFADVLSVKEFPRNLFSQLLPPEFDILCTHPMF 206

Query: 1808 GPESGRDGWQGLNFVYEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAES 1987
            GPESG+ GW GL FVYEKVR+G + +R  RC RFLNIFAQEGC M EMSC EHDRHAAES
Sbjct: 207  GPESGKAGWSGLPFVYEKVRVG-KGARAERCYRFLNIFAQEGCRMVEMSCTEHDRHAAES 265

Query: 1988 QFITHVMGRVLEKFGVESTPINTKGYESLLNLVSNTSGDSFELFYGLFIYNKNSLEQLER 2167
            QFITH +GR+L K  +ESTPINTKGYE+LL +V NT GDSF+L+YGLF+YN N+ EQLER
Sbjct: 266  QFITHTVGRMLAKLNLESTPINTKGYETLLRIVDNTCGDSFDLYYGLFMYNNNATEQLER 325

Query: 2168 LDMAFESVKKLLFGKTHNVVREQLF 2242
            L+MAF+++KK L G+ H ++R+QLF
Sbjct: 326  LEMAFDALKKQLMGQLHQILRKQLF 350


>ref|XP_003525645.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic-like [Glycine
            max]
          Length = 685

 Score =  442 bits (1136), Expect = e-121
 Identities = 216/303 (71%), Positives = 253/303 (83%)
 Frame = +2

Query: 1334 FNYKKVQTSYFPNLRVRAIDAAQPFDLEAKRYEHFEKSTRLKIGIVGFGNFGQFLAKTLV 1513
            F+  K  +SY P LR+RAIDAAQPFD E++  + F  S +LKI IVGFGNFGQFLA+TLV
Sbjct: 34   FSAPKTISSYRPILRIRAIDAAQPFDYESRMAQQFHDSQKLKIAIVGFGNFGQFLAQTLV 93

Query: 1514 KQGHTVLAHSRSDYSDIARELGVSFFSDPNDLCEEHPEVILLCSSIVSTKAVLQSIPFQR 1693
            +QGHTVLAHSRSD+S  A++LGV+FF +P+DLCEEHPEVILLCSSI+ST+ VL ++P QR
Sbjct: 94   RQGHTVLAHSRSDHSLAAQQLGVTFFPNPHDLCEEHPEVILLCSSIISTQRVLLTLPLQR 153

Query: 1694 LKRSTLFVDVLSVKEFPRDLFLKVLPPEFDILCTHPMFGPESGRDGWQGLNFVYEKVRIG 1873
            LKRSTLFVDVLSVKEFP++L L  LP +FD+LCTHPMFGP+S    W GL FVYEKVRIG
Sbjct: 154  LKRSTLFVDVLSVKEFPKNLLLHALPSDFDVLCTHPMFGPQSAPRAWTGLPFVYEKVRIG 213

Query: 1874 IEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRVLEKFGVESTPIN 2053
             +E RI RC++FL IFA+EGC M EMSC +HD+ AA SQFITH +GRVLE   VESTPIN
Sbjct: 214  SDEHRIARCEKFLGIFAREGCRMVEMSCADHDKFAAGSQFITHTVGRVLEMLTVESTPIN 273

Query: 2054 TKGYESLLNLVSNTSGDSFELFYGLFIYNKNSLEQLERLDMAFESVKKLLFGKTHNVVRE 2233
            TKGYESLLNLV NTSGDSF+LFYGLF+YNKNSLE LERLD AFE ++K L G+ H+VVRE
Sbjct: 274  TKGYESLLNLVENTSGDSFDLFYGLFMYNKNSLEMLERLDFAFEDLRKQLMGRLHDVVRE 333

Query: 2234 QLF 2242
            QLF
Sbjct: 334  QLF 336



 Score =  407 bits (1045), Expect = e-110
 Identities = 196/295 (66%), Positives = 242/295 (82%)
 Frame = +2

Query: 1367 PNLRVRAIDAAQPFDLEAKRYEHFEKSTRLKIGIVGFGNFGQFLAKTLVKQGHTVLAHSR 1546
            P+  +R+ D  + ++ ++      +  T+LKI IVGFGNFGQFLAKT V+ GH VLA+SR
Sbjct: 372  PSNDLRSSDVVKLYNYKSNDANQSDDKTKLKIAIVGFGNFGQFLAKTFVRHGHQVLAYSR 431

Query: 1547 SDYSDIARELGVSFFSDPNDLCEEHPEVILLCSSIVSTKAVLQSIPFQRLKRSTLFVDVL 1726
            SDYS +A+ELGVS+F++ +DLCE+HPEVILLC+SI+ST+ VL+S+P QRLKRSTLFVDVL
Sbjct: 432  SDYSHVAQELGVSYFNNIDDLCEQHPEVILLCTSILSTEKVLKSLPVQRLKRSTLFVDVL 491

Query: 1727 SVKEFPRDLFLKVLPPEFDILCTHPMFGPESGRDGWQGLNFVYEKVRIGIEESRINRCDR 1906
            SVKEFPR+LFL  LP  FDILCTHPMFGPESG++GW GL FVY+KVRIGI+ESR +RCD+
Sbjct: 492  SVKEFPRNLFLHHLPHNFDILCTHPMFGPESGKNGWNGLAFVYDKVRIGIDESRTSRCDQ 551

Query: 1907 FLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRVLEKFGVESTPINTKGYESLLNLV 2086
            FL+IFA EGC M EMSC EHD HAA SQFITH  GR LEK  +E TPI+TKGYE+LL+LV
Sbjct: 552  FLDIFASEGCRMVEMSCAEHDWHAAGSQFITHTTGRFLEKLELEGTPIDTKGYETLLSLV 611

Query: 2087 SNTSGDSFELFYGLFIYNKNSLEQLERLDMAFESVKKLLFGKTHNVVREQLFPKE 2251
             NT+GDSF+L+YGLF+YN N++EQLER D+AFESVKK LF + H   R+Q+F  E
Sbjct: 612  ENTAGDSFDLYYGLFLYNINAMEQLERFDLAFESVKKELFDRLHGFYRQQVFKHE 666


>ref|XP_002530754.1| prephenate dehydrogenase, putative [Ricinus communis]
            gi|223529670|gb|EEF31614.1| prephenate dehydrogenase,
            putative [Ricinus communis]
          Length = 690

 Score =  440 bits (1132), Expect = e-121
 Identities = 209/286 (73%), Positives = 253/286 (88%)
 Frame = +2

Query: 1394 AAQPFDLEAKRYEHFEKSTRLKIGIVGFGNFGQFLAKTLVKQGHTVLAHSRSDYSDIARE 1573
            AAQP++ +AK       +++LKI IVGFGNFGQFLAKTLV+QGHTVLA+SRSDYSD A++
Sbjct: 373  AAQPYEYKAKTSNCINDNSKLKIAIVGFGNFGQFLAKTLVRQGHTVLAYSRSDYSDEAQK 432

Query: 1574 LGVSFFSDPNDLCEEHPEVILLCSSIVSTKAVLQSIPFQRLKRSTLFVDVLSVKEFPRDL 1753
            LGVS+FSD NDLCEEHPEVILLC+SI+ST+ VL+S+P QRLKRSTLFVDVLSVKEFPR+L
Sbjct: 433  LGVSYFSDANDLCEEHPEVILLCTSILSTENVLKSLPVQRLKRSTLFVDVLSVKEFPRNL 492

Query: 1754 FLKVLPPEFDILCTHPMFGPESGRDGWQGLNFVYEKVRIGIEESRINRCDRFLNIFAQEG 1933
            FL+ LPP+FDILCTHPMFGPESG++GW  L F+++KVR+G +E R++RCDRFL+IFA+EG
Sbjct: 493  FLQHLPPDFDILCTHPMFGPESGKNGWNHLPFLFDKVRVGSDERRVSRCDRFLDIFAREG 552

Query: 1934 CNMKEMSCGEHDRHAAESQFITHVMGRVLEKFGVESTPINTKGYESLLNLVSNTSGDSFE 2113
            C M EMSC EHD HAA SQFITH MGR+LEK G+ESTPINTKGYE+LLNLV NT+GDSF+
Sbjct: 553  CRMVEMSCSEHDWHAAGSQFITHTMGRILEKLGLESTPINTKGYETLLNLVENTAGDSFD 612

Query: 2114 LFYGLFIYNKNSLEQLERLDMAFESVKKLLFGKTHNVVREQLFPKE 2251
            L+YGLF+YN N++EQLERLD+AFES+KK LFG+ H V+R+QLF  E
Sbjct: 613  LYYGLFMYNVNAMEQLERLDLAFESLKKQLFGRLHGVLRKQLFENE 658



 Score =  395 bits (1014), Expect = e-107
 Identities = 200/337 (59%), Positives = 252/337 (74%)
 Frame = +2

Query: 1241 MLSFPSLQQPPRTRVIIPSSLWTSSVPKIFTFNYKKVQTSYFPNLRVRAIDAAQPFDLEA 1420
            +LS P   QPP      PS   TS    I    +  +++      + + I    P +   
Sbjct: 13   LLSPPPPPQPP------PSLFPTSKPTTISIRTHLFIKSQSATATKKQLIPKTNPDNTTQ 66

Query: 1421 KRYEHFEKSTRLKIGIVGFGNFGQFLAKTLVKQGHTVLAHSRSDYSDIARELGVSFFSDP 1600
            +       S  LK+ I+GFGNFGQFLAKTLV QGHTVLAHSR+D+S  A  LGVSFF DP
Sbjct: 67   R--PPLSNSHVLKVAIIGFGNFGQFLAKTLVAQGHTVLAHSRTDHSLEAHSLGVSFFLDP 124

Query: 1601 NDLCEEHPEVILLCSSIVSTKAVLQSIPFQRLKRSTLFVDVLSVKEFPRDLFLKVLPPEF 1780
            +DLCE+HP+VILLC+SI+ST+ VL+S+P QR KR+TLFVDVLSVKEF ++L L +LP +F
Sbjct: 125  HDLCEQHPDVILLCTSIISTEKVLKSLPLQRFKRNTLFVDVLSVKEFAKNLLLDLLPSDF 184

Query: 1781 DILCTHPMFGPESGRDGWQGLNFVYEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCG 1960
            DI+C+HPMFGP+S + GW GL+FVYEKVRIG EESR+ RC  FL++FA+EGC M E+SC 
Sbjct: 185  DIICSHPMFGPQSAKLGWDGLHFVYEKVRIGNEESRVTRCKSFLDVFAREGCKMVELSCH 244

Query: 1961 EHDRHAAESQFITHVMGRVLEKFGVESTPINTKGYESLLNLVSNTSGDSFELFYGLFIYN 2140
            EHD++AA SQFITH +GRVLE   +ESTPINTKGYESLL LV NT+ DSF+L+YGLF+YN
Sbjct: 245  EHDKYAAGSQFITHTVGRVLEMLSLESTPINTKGYESLLGLVENTAEDSFDLYYGLFMYN 304

Query: 2141 KNSLEQLERLDMAFESVKKLLFGKTHNVVREQLFPKE 2251
            KN+LE LERLD+AFE+++K LFG+ H+VVR+QLF  E
Sbjct: 305  KNALEMLERLDLAFEALRKQLFGRLHDVVRKQLFGNE 341


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