BLASTX nr result

ID: Coptis21_contig00001372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001372
         (1397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263235.1| PREDICTED: somatic embryogenesis receptor ki...   322   2e-85
ref|XP_004136945.1| PREDICTED: somatic embryogenesis receptor ki...   316   1e-83
ref|XP_002527489.1| serine-threonine protein kinase, plant-type,...   315   1e-83
ref|XP_002298766.1| predicted protein [Populus trichocarpa] gi|2...   313   5e-83
ref|NP_001241049.1| somatic embryogenesis receptor kinase 1-like...   308   2e-81

>ref|XP_002263235.1| PREDICTED: somatic embryogenesis receptor kinase 1 [Vitis vinifera]
           gi|296083074|emb|CBI22478.3| unnamed protein product
           [Vitis vinifera]
          Length = 213

 Score =  322 bits (824), Expect = 2e-85
 Identities = 154/194 (79%), Positives = 168/194 (86%)
 Frame = +2

Query: 236 TISTNSEGNALHTLRTRLSDPNNVLQSWDPTLVNPCTWFHVTCDSSNRVIRLDLGNSNIS 415
           T+STNSEGNALH LR+RLSDP NVLQSWDPTLVNPCTWFHVTCDS+NRVIRLDLGNSNIS
Sbjct: 21  TLSTNSEGNALHALRSRLSDPTNVLQSWDPTLVNPCTWFHVTCDSNNRVIRLDLGNSNIS 80

Query: 416 GSLGPELGELKHLQYLELYRNNIKGKIPKELGNLKNLISMDLYENALQGSIPXXXXXXXX 595
           GSLGPELG+L+HLQYLELYRNN +GKIPKELGNLKNLISMDLY+N  +G IP        
Sbjct: 81  GSLGPELGQLQHLQYLELYRNNFEGKIPKELGNLKNLISMDLYDNKFEGKIPKSIAKLKS 140

Query: 596 XXXXXXNNNKLTGSIPRELAKLSNLKVFDVSNNDLCGTIPIDGPFGSFTRESYENNGRLN 775
                 NNNKLTGSIPRELA LSNLKVFDVSNN+LCGTIP+DGPF +F  ES++NN R +
Sbjct: 141 LRFLRLNNNKLTGSIPRELATLSNLKVFDVSNNNLCGTIPVDGPFANFPMESFQNN-RFS 199

Query: 776 GPELQGLVPYDFGC 817
           GPELQGLVPYDFGC
Sbjct: 200 GPELQGLVPYDFGC 213


>ref|XP_004136945.1| PREDICTED: somatic embryogenesis receptor kinase 1-like [Cucumis
           sativus] gi|449520124|ref|XP_004167084.1| PREDICTED:
           somatic embryogenesis receptor kinase 1-like [Cucumis
           sativus]
          Length = 212

 Score =  316 bits (809), Expect = 1e-83
 Identities = 150/197 (76%), Positives = 164/197 (83%)
 Frame = +2

Query: 227 ICPTISTNSEGNALHTLRTRLSDPNNVLQSWDPTLVNPCTWFHVTCDSSNRVIRLDLGNS 406
           + P ISTNSEGNALH LR RLSDP NVLQSWDPTLVNPCTWFHVTCDS N VIRLDLGNS
Sbjct: 17  LSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDNHVIRLDLGNS 76

Query: 407 NISGSLGPELGELKHLQYLELYRNNIKGKIPKELGNLKNLISMDLYENALQGSIPXXXXX 586
           NISG+LGPE+G+L+HLQYLELYRN + GKIP ELGNLKNL+SMDLYEN  +G IP     
Sbjct: 77  NISGTLGPEIGDLQHLQYLELYRNGLSGKIPTELGNLKNLVSMDLYENKFEGKIPKSFAK 136

Query: 587 XXXXXXXXXNNNKLTGSIPRELAKLSNLKVFDVSNNDLCGTIPIDGPFGSFTRESYENNG 766
                    NNNKLTGSIPRELA LS LK+FDVSNNDLCGTIP+DGPF +F+ ESY NN 
Sbjct: 137 LESLRFLRMNNNKLTGSIPRELASLSKLKIFDVSNNDLCGTIPVDGPFATFSMESYVNN- 195

Query: 767 RLNGPELQGLVPYDFGC 817
           +L+GPELQGLVPYDFGC
Sbjct: 196 KLSGPELQGLVPYDFGC 212


>ref|XP_002527489.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223533129|gb|EEF34887.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 212

 Score =  315 bits (808), Expect = 1e-83
 Identities = 151/195 (77%), Positives = 164/195 (84%)
 Frame = +2

Query: 233 PTISTNSEGNALHTLRTRLSDPNNVLQSWDPTLVNPCTWFHVTCDSSNRVIRLDLGNSNI 412
           P++ TNSEGNALH LR RLSDP NVLQSWDPTLVNPCTWFHVTCDS+N VIRLDLGNSNI
Sbjct: 19  PSLCTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNI 78

Query: 413 SGSLGPELGELKHLQYLELYRNNIKGKIPKELGNLKNLISMDLYENALQGSIPXXXXXXX 592
           SG+LGPELG+L+HLQYLELYRN I GKIPKELGNLKNL+SMDLYEN  +G IP       
Sbjct: 79  SGTLGPELGQLQHLQYLELYRNEIGGKIPKELGNLKNLVSMDLYENKFEGRIPKTLAKLK 138

Query: 593 XXXXXXXNNNKLTGSIPRELAKLSNLKVFDVSNNDLCGTIPIDGPFGSFTRESYENNGRL 772
                  NNNKLTGSIPREL  L +LKVFDVSNNDLCGTIP+DGPF +F  ES+ENN RL
Sbjct: 139 SLRFLRLNNNKLTGSIPRELTTLKDLKVFDVSNNDLCGTIPVDGPFSTFPMESFENN-RL 197

Query: 773 NGPELQGLVPYDFGC 817
           NGPEL+GLVPYDFGC
Sbjct: 198 NGPELKGLVPYDFGC 212


>ref|XP_002298766.1| predicted protein [Populus trichocarpa] gi|222846024|gb|EEE83571.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  313 bits (803), Expect = 5e-83
 Identities = 150/197 (76%), Positives = 166/197 (84%)
 Frame = +2

Query: 227 ICPTISTNSEGNALHTLRTRLSDPNNVLQSWDPTLVNPCTWFHVTCDSSNRVIRLDLGNS 406
           I P++STNSEGNALH LR+RLSDP NVLQSWDPTLVNPCTWFHVTCDSSN V RLDLGNS
Sbjct: 17  ISPSLSTNSEGNALHALRSRLSDPTNVLQSWDPTLVNPCTWFHVTCDSSNHVTRLDLGNS 76

Query: 407 NISGSLGPELGELKHLQYLELYRNNIKGKIPKELGNLKNLISMDLYENALQGSIPXXXXX 586
           NISG+LGPELGEL+HL+YLELYRN+I GKIPKELGNLKNL+SMD+Y N  +G IP     
Sbjct: 77  NISGTLGPELGELRHLKYLELYRNDIGGKIPKELGNLKNLVSMDMYGNRFEGEIPKSFAK 136

Query: 587 XXXXXXXXXNNNKLTGSIPRELAKLSNLKVFDVSNNDLCGTIPIDGPFGSFTRESYENNG 766
                    NNNKL+GSIPREL  L +LKVFDVSNNDLCGTIP+DGPF SF  ES+ENN 
Sbjct: 137 LKSLRFLRLNNNKLSGSIPRELTTLKDLKVFDVSNNDLCGTIPVDGPFTSFPMESFENN- 195

Query: 767 RLNGPELQGLVPYDFGC 817
           +LNGPEL+GLVPYDFGC
Sbjct: 196 KLNGPELKGLVPYDFGC 212


>ref|NP_001241049.1| somatic embryogenesis receptor kinase 1-like precursor [Glycine
           max] gi|223452536|gb|ACM89595.1| leucine-rich repeat
           family protein [Glycine max]
          Length = 212

 Score =  308 bits (790), Expect = 2e-81
 Identities = 145/194 (74%), Positives = 166/194 (85%)
 Frame = +2

Query: 236 TISTNSEGNALHTLRTRLSDPNNVLQSWDPTLVNPCTWFHVTCDSSNRVIRLDLGNSNIS 415
           ++STN EGNALH LR+R+SDPNNVLQSWDPTLVNPCTWFHVTCDS+N VIRLDLGNSN+S
Sbjct: 20  SLSTNPEGNALHALRSRISDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVS 79

Query: 416 GSLGPELGELKHLQYLELYRNNIKGKIPKELGNLKNLISMDLYENALQGSIPXXXXXXXX 595
           G+LGPELG+L+HLQYLELYRN + GKIPKELGNLK+LISMDLY+N L+G IP        
Sbjct: 80  GTLGPELGQLQHLQYLELYRNELTGKIPKELGNLKSLISMDLYDNKLEGKIPKSFGKLKS 139

Query: 596 XXXXXXNNNKLTGSIPRELAKLSNLKVFDVSNNDLCGTIPIDGPFGSFTRESYENNGRLN 775
                 NNNKLTGSIPREL +L+NLK+FDVSNNDLCGTIP++G F SF  ES+ENN R +
Sbjct: 140 LKFLRLNNNKLTGSIPRELTRLTNLKIFDVSNNDLCGTIPVEGNFESFPMESFENN-RFS 198

Query: 776 GPELQGLVPYDFGC 817
           GPEL+GLVPYDFGC
Sbjct: 199 GPELKGLVPYDFGC 212


Top