BLASTX nr result

ID: Coptis21_contig00001364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001364
         (1787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282252.1| PREDICTED: glutamate-rich WD repeat-containi...   678   0.0  
ref|XP_003524897.1| PREDICTED: glutamate-rich WD repeat-containi...   662   0.0  
ref|XP_004173317.1| PREDICTED: glutamate-rich WD repeat-containi...   650   0.0  
ref|XP_004135709.1| PREDICTED: glutamate-rich WD repeat-containi...   650   0.0  
ref|XP_003531198.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-ri...   650   0.0  

>ref|XP_002282252.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Vitis
            vinifera] gi|297738673|emb|CBI27918.3| unnamed protein
            product [Vitis vinifera]
          Length = 474

 Score =  678 bits (1749), Expect = 0.0
 Identities = 320/445 (71%), Positives = 360/445 (80%), Gaps = 1/445 (0%)
 Frame = -2

Query: 1612 MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 1433
            +P KVWQPGVDK+EEGEELQCDPSAYNSLHAFH+GWPCLSFDIVRD LGL+R+EFPHT Y
Sbjct: 30   LPTKVWQPGVDKLEEGEELQCDPSAYNSLHAFHVGWPCLSFDIVRDSLGLVRSEFPHTAY 89

Query: 1432 CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 1253
             VAGTQAE  SWN IG++KLS ISGK+R+LVP                            
Sbjct: 90   FVAGTQAEKASWNSIGIFKLSNISGKKRELVPTTKSTGDDSDMDGDGSDSDEDSENEEDG 149

Query: 1252 GAQPPVLQLRKIVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEVS 1073
            G+  P+LQ+RK+ H+G VNRIR+M QNPHICASWADTGHVQVWDFSSHLNALAE+E + +
Sbjct: 150  GSGTPILQMRKVAHEGCVNRIRAMTQNPHICASWADTGHVQVWDFSSHLNALAESETDAN 209

Query: 1072 TGDSSSFSMDPLMKFGGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDST 893
             G + + +  PL+KFGGHKDEG+A+DWSP+VPG+LV+GDCK  I+LWEP S  TWKVD+ 
Sbjct: 210  QGSTPAINQAPLVKFGGHKDEGYAIDWSPVVPGKLVTGDCKNCIYLWEPTSDATWKVDTN 269

Query: 892  PFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKADVNVISWNR 713
            PF+GH  SVEDLQWSPTE  VFASCSVDG  AIWDTRLG++PA S KAH ADVNV+SWNR
Sbjct: 270  PFIGHTASVEDLQWSPTEVHVFASCSVDGNIAIWDTRLGRSPAASFKAHNADVNVLSWNR 329

Query: 712  LASCMLASGSDDGTFSIHDLRLLK-GDSRVAHFEYHKQPITSIEWSPHEPSTLAVSSTDN 536
            LASCMLASGSDDGTFSI DLRLLK GDS VAHFEYHK PITSIEWSPHE STLAVSS+DN
Sbjct: 330  LASCMLASGSDDGTFSIRDLRLLKDGDSVVAHFEYHKHPITSIEWSPHEASTLAVSSSDN 389

Query: 535  QLTIWDLSLXXXXXXXXXXXXRIKEQANAPEDLPPQLLFVHQGQKDLKELHWHAQIPGML 356
            QLTIWDLSL            + KEQ NAPEDLPPQLLFVHQGQKDLKELHWH+QIPGM+
Sbjct: 390  QLTIWDLSLEKDEEEEAEFRAQTKEQVNAPEDLPPQLLFVHQGQKDLKELHWHSQIPGMI 449

Query: 355  LSTASDGFNVLMPSNIENTLPSDNA 281
            +STA+DGFNVLMPSNI+N LPS NA
Sbjct: 450  ISTAADGFNVLMPSNIQNVLPSGNA 474


>ref|XP_003524897.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
            [Glycine max]
          Length = 475

 Score =  662 bits (1708), Expect = 0.0
 Identities = 321/447 (71%), Positives = 356/447 (79%), Gaps = 3/447 (0%)
 Frame = -2

Query: 1612 MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 1433
            +PAKVWQPGVDK+EEGEELQCDPSAYNSLHAFHIGWPCLSFDI+RD LGL+R EFPHT+Y
Sbjct: 32   IPAKVWQPGVDKLEEGEELQCDPSAYNSLHAFHIGWPCLSFDILRDSLGLVRKEFPHTVY 91

Query: 1432 CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 1253
             +AGTQAE PSWN IG++K+S I+GKRR+ VP                            
Sbjct: 92   FMAGTQAEKPSWNSIGIFKVSNITGKRREPVPKLGTDDTEMDGEDSDSDDDSEDEEGG-- 149

Query: 1252 GAQPPVLQLRKIVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEVS 1073
             AQ P LQLRK+ HQG VNRIRSM QNPHICA+WADTGHVQVWD +SHLNALAE+E E  
Sbjct: 150  -AQGPSLQLRKVAHQGCVNRIRSMPQNPHICAAWADTGHVQVWDLNSHLNALAESETEGV 208

Query: 1072 TGDSSSFSMDPLMKFGGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDST 893
             G ++ F+ DPL KF  HKDEG+A+DWSPLVPGRL SGDC   I+LWEP S+GTW VD+ 
Sbjct: 209  QGVAAVFNQDPLYKFK-HKDEGYAIDWSPLVPGRLASGDCNNCIYLWEPTSAGTWNVDNA 267

Query: 892  PFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKADVNVISWNR 713
            PF GH  SVEDLQWSPTE DVFASCSVDG  AIWDTRLGK+PA S KAH ADVNV+SWNR
Sbjct: 268  PFTGHTASVEDLQWSPTEPDVFASCSVDGNIAIWDTRLGKSPAASFKAHNADVNVMSWNR 327

Query: 712  LASCMLASGSDDGTFSIHDLRLLK---GDSRVAHFEYHKQPITSIEWSPHEPSTLAVSST 542
            LASCMLASGSDDGT SI DLRLLK   GDS VAHFEYHK PITSIEWSPHE S+LAVSS+
Sbjct: 328  LASCMLASGSDDGTISIRDLRLLKVQEGDSVVAHFEYHKHPITSIEWSPHEASSLAVSSS 387

Query: 541  DNQLTIWDLSLXXXXXXXXXXXXRIKEQANAPEDLPPQLLFVHQGQKDLKELHWHAQIPG 362
            DNQLTIWDLSL            + KEQ NAPEDLPPQLLF+HQGQKDLKELHWHAQIPG
Sbjct: 388  DNQLTIWDLSLEKDEEEEAEFKAKTKEQVNAPEDLPPQLLFIHQGQKDLKELHWHAQIPG 447

Query: 361  MLLSTASDGFNVLMPSNIENTLPSDNA 281
            M++STA+DGFN+LMPSNI++TLPSD A
Sbjct: 448  MIVSTAADGFNILMPSNIQSTLPSDGA 474


>ref|XP_004173317.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like,
            partial [Cucumis sativus]
          Length = 465

 Score =  650 bits (1678), Expect = 0.0
 Identities = 319/445 (71%), Positives = 353/445 (79%), Gaps = 1/445 (0%)
 Frame = -2

Query: 1612 MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 1433
            +PAKVW+PGVDK+EEGEELQCDP+AYNSLHAF+I WP LSFDIVRD LGL+RTEFPHT+Y
Sbjct: 22   VPAKVWRPGVDKLEEGEELQCDPTAYNSLHAFNISWPSLSFDIVRDTLGLVRTEFPHTIY 81

Query: 1432 CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 1253
             VAGTQAE  SWN IG+YK+S ISGKRR+L+P+K                          
Sbjct: 82   FVAGTQAEKASWNSIGIYKISNISGKRRELLPSKPVTDDTDMDSDSSDSDEDDEGEENGG 141

Query: 1252 GAQPPVLQLRKIVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEVS 1073
              + PV QLRK+ H+G VNRIR+M QNPHICASWAD GHVQ+WDFSSHLN LA +E  VS
Sbjct: 142  Y-KLPVWQLRKVAHEGCVNRIRAMQQNPHICASWADGGHVQIWDFSSHLNTLAGSEPTVS 200

Query: 1072 TGDSSSFSMDPLMKFGGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDST 893
             GDSS F+  PL  F  HKDEG+ALDWSPLVPGRL+SGDCK  IHLWEP S+ +W VD+ 
Sbjct: 201  PGDSSVFNQAPLTLF-KHKDEGYALDWSPLVPGRLLSGDCKSFIHLWEPSSATSWNVDTA 259

Query: 892  PFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKADVNVISWNR 713
            PFVGH+ SVEDLQWSPTE  VF+SCS DG  AIWD R GK+PA S KAH ADVNVISWNR
Sbjct: 260  PFVGHSASVEDLQWSPTEPHVFSSCSADGNVAIWDVRSGKSPAASFKAHNADVNVISWNR 319

Query: 712  LASCMLASGSDDGTFSIHDLRLLK-GDSRVAHFEYHKQPITSIEWSPHEPSTLAVSSTDN 536
            LASCMLASGSDDGTFSIHDLRLLK GDS VAHFEYHKQPITSIEWSPHE STLAVSS DN
Sbjct: 320  LASCMLASGSDDGTFSIHDLRLLKEGDSVVAHFEYHKQPITSIEWSPHEASTLAVSSADN 379

Query: 535  QLTIWDLSLXXXXXXXXXXXXRIKEQANAPEDLPPQLLFVHQGQKDLKELHWHAQIPGML 356
            QLTIWDLSL            + +EQ NAPEDLPPQLLFVHQGQ DLKELHWHAQIPGM+
Sbjct: 380  QLTIWDLSLEKDEEEEAEFKAKTQEQVNAPEDLPPQLLFVHQGQNDLKELHWHAQIPGMI 439

Query: 355  LSTASDGFNVLMPSNIENTLPSDNA 281
            +STA+DGFN+LMPSNI+ TLPSD A
Sbjct: 440  VSTAADGFNILMPSNIQTTLPSDAA 464


>ref|XP_004135709.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
            [Cucumis sativus]
          Length = 475

 Score =  650 bits (1678), Expect = 0.0
 Identities = 319/445 (71%), Positives = 353/445 (79%), Gaps = 1/445 (0%)
 Frame = -2

Query: 1612 MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 1433
            +PAKVW+PGVDK+EEGEELQCDP+AYNSLHAF+I WP LSFDIVRD LGL+RTEFPHT+Y
Sbjct: 32   VPAKVWRPGVDKLEEGEELQCDPTAYNSLHAFNISWPSLSFDIVRDTLGLVRTEFPHTIY 91

Query: 1432 CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 1253
             VAGTQAE  SWN IG+YK+S ISGKRR+L+P+K                          
Sbjct: 92   FVAGTQAEKASWNSIGIYKISNISGKRRELLPSKPVTDDTDMDSDSSDSDEDDEGEENGG 151

Query: 1252 GAQPPVLQLRKIVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEVS 1073
              + PV QLRK+ H+G VNRIR+M QNPHICASWAD GHVQ+WDFSSHLN LA +E  VS
Sbjct: 152  Y-KLPVWQLRKVAHEGCVNRIRAMQQNPHICASWADGGHVQIWDFSSHLNTLAGSEPTVS 210

Query: 1072 TGDSSSFSMDPLMKFGGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDST 893
             GDSS F+  PL  F  HKDEG+ALDWSPLVPGRL+SGDCK  IHLWEP S+ +W VD+ 
Sbjct: 211  PGDSSVFNQAPLTLF-KHKDEGYALDWSPLVPGRLLSGDCKSFIHLWEPSSATSWNVDTA 269

Query: 892  PFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKADVNVISWNR 713
            PFVGH+ SVEDLQWSPTE  VF+SCS DG  AIWD R GK+PA S KAH ADVNVISWNR
Sbjct: 270  PFVGHSASVEDLQWSPTEPHVFSSCSADGNVAIWDVRSGKSPAASFKAHNADVNVISWNR 329

Query: 712  LASCMLASGSDDGTFSIHDLRLLK-GDSRVAHFEYHKQPITSIEWSPHEPSTLAVSSTDN 536
            LASCMLASGSDDGTFSIHDLRLLK GDS VAHFEYHKQPITSIEWSPHE STLAVSS DN
Sbjct: 330  LASCMLASGSDDGTFSIHDLRLLKEGDSVVAHFEYHKQPITSIEWSPHEASTLAVSSADN 389

Query: 535  QLTIWDLSLXXXXXXXXXXXXRIKEQANAPEDLPPQLLFVHQGQKDLKELHWHAQIPGML 356
            QLTIWDLSL            + +EQ NAPEDLPPQLLFVHQGQ DLKELHWHAQIPGM+
Sbjct: 390  QLTIWDLSLEKDEEEEAEFKAKTQEQVNAPEDLPPQLLFVHQGQNDLKELHWHAQIPGMI 449

Query: 355  LSTASDGFNVLMPSNIENTLPSDNA 281
            +STA+DGFN+LMPSNI+ TLPSD A
Sbjct: 450  VSTAADGFNILMPSNIQTTLPSDAA 474


>ref|XP_003531198.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-rich WD repeat-containing
            protein 1-like [Glycine max]
          Length = 472

 Score =  650 bits (1678), Expect = 0.0
 Identities = 316/446 (70%), Positives = 352/446 (78%), Gaps = 2/446 (0%)
 Frame = -2

Query: 1612 MPAKVWQPGVDKIEEGEELQCDPSAYNSLHAFHIGWPCLSFDIVRDQLGLIRTEFPHTLY 1433
            +PAKVWQPGVDK+EEGEELQCDPSAYNSLHAFHIGWPCLSFDI+RD LGL+RTEFPHT+Y
Sbjct: 27   IPAKVWQPGVDKLEEGEELQCDPSAYNSLHAFHIGWPCLSFDILRDSLGLVRTEFPHTVY 86

Query: 1432 CVAGTQAENPSWNYIGMYKLSKISGKRRDLVPNKAXXXXXXXXXXXXXXXXXXXXXXXXX 1253
             +AGTQAE PSWN IG++K+S I+GKRR+ VP                            
Sbjct: 87   FMAGTQAEKPSWNSIGIFKVSNITGKRREPVPKLGTDDTEMDGEDSDSDDDSEEEDEGVL 146

Query: 1252 GAQP-PVLQLRKIVHQGGVNRIRSMAQNPHICASWADTGHVQVWDFSSHLNALAETEAEV 1076
                   LQLRK+ HQG VNRIRSM QNPHICA+WADTGHVQVWD +SHLN LAETE E 
Sbjct: 147  TFXFFSHLQLRKVAHQGCVNRIRSMPQNPHICAAWADTGHVQVWDLNSHLNVLAETETEG 206

Query: 1075 STGDSSSFSMDPLMKFGGHKDEGFALDWSPLVPGRLVSGDCKKAIHLWEPLSSGTWKVDS 896
              G ++ F+ DPL KF  HKDEG+A+DWSPLVPG+L SGDC   I+LWEP S+GTW VD+
Sbjct: 207  VQGVAAVFNQDPLYKFK-HKDEGYAIDWSPLVPGKLASGDCNNCIYLWEPTSAGTWNVDN 265

Query: 895  TPFVGHAGSVEDLQWSPTEADVFASCSVDGTFAIWDTRLGKTPAVSIKAHKADVNVISWN 716
             PF+GH  SVEDLQWSPTE+ VFASCSVDG  AIWDTRLGK+PA S KAH ADVNV+SWN
Sbjct: 266  APFIGHTASVEDLQWSPTESHVFASCSVDGNIAIWDTRLGKSPAASFKAHNADVNVMSWN 325

Query: 715  RLASCMLASGSDDGTFSIHDLRLLK-GDSRVAHFEYHKQPITSIEWSPHEPSTLAVSSTD 539
            RLASCMLASGSDDGT SI DLRLLK GDS VAHFEYHK PITSIEWSPHE S+LAVSS+D
Sbjct: 326  RLASCMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKHPITSIEWSPHEASSLAVSSSD 385

Query: 538  NQLTIWDLSLXXXXXXXXXXXXRIKEQANAPEDLPPQLLFVHQGQKDLKELHWHAQIPGM 359
            NQLTIWDLSL            + KEQ NAPEDLPPQLLF+HQGQKDLKELHWH QIPGM
Sbjct: 386  NQLTIWDLSLEKDEEEEAEFKAKTKEQVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGM 445

Query: 358  LLSTASDGFNVLMPSNIENTLPSDNA 281
            ++STA DGFNVLMPSNI++TLPS+ A
Sbjct: 446  IVSTAEDGFNVLMPSNIQSTLPSNGA 471


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