BLASTX nr result

ID: Coptis21_contig00001362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001362
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239713.1| uncharacterized protein LOC100786704 [Glycin...   364   3e-98
ref|XP_003523431.1| PREDICTED: F-box protein 7-like [Glycine max]     363   4e-98
ref|XP_003634429.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   362   1e-97
gb|AFK44794.1| unknown [Lotus japonicus]                              361   2e-97
ref|XP_004165186.1| PREDICTED: F-box protein 7-like [Cucumis sat...   360   5e-97

>ref|NP_001239713.1| uncharacterized protein LOC100786704 [Glycine max]
           gi|255635177|gb|ACU17944.1| unknown [Glycine max]
          Length = 329

 Score =  364 bits (934), Expect = 3e-98
 Identities = 175/255 (68%), Positives = 198/255 (77%), Gaps = 23/255 (9%)
 Frame = -1

Query: 969 ACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSWRKMWLLRPRVRTDGI 790
           +CVCRKW+YTIRNPVFWR ACLKAWQ  G +ENYKI+QSKY+ SWRKMWLLRPR+RTDG+
Sbjct: 86  SCVCRKWKYTIRNPVFWRNACLKAWQLFGIVENYKILQSKYDGSWRKMWLLRPRLRTDGL 145

Query: 789 YVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQIVKDVAKSMTFHASK 610
           YVSRNTYI  GVAEWKITNPVH+VCYFRY+RFFPSGRF YKNSSQ +KDVAK M F +SK
Sbjct: 146 YVSRNTYIRAGVAEWKITNPVHVVCYFRYLRFFPSGRFLYKNSSQKIKDVAKCMNFRSSK 205

Query: 609 ADSIPSRKREEADSVFSGHYTLSQDEVDAAFPYPGLHPTVLRLQLRLRGTIVGANNRMDI 430
                       D VF GHYTLS D+V+AA  YPG+ PTVLR++LRLRGT  GANNRMD+
Sbjct: 206 -----------IDCVFGGHYTLSDDKVEAAVLYPGMRPTVLRIRLRLRGTTTGANNRMDL 254

Query: 429 LSLVTS-----------------------KETHNPDVPAVSHRRGLNPFVFVPFEEVETS 319
           +SLVTS                        ETHNPDVPAVSH+RG+ PFVFVPFEEVETS
Sbjct: 255 ISLVTSGVNSSEASAPEEDILGVVEGWQDDETHNPDVPAVSHKRGMTPFVFVPFEEVETS 314

Query: 318 VLNLPVDKMDYYLPG 274
           VLNLPV+KMDY++PG
Sbjct: 315 VLNLPVEKMDYFVPG 329


>ref|XP_003523431.1| PREDICTED: F-box protein 7-like [Glycine max]
          Length = 329

 Score =  363 bits (933), Expect = 4e-98
 Identities = 175/255 (68%), Positives = 199/255 (78%), Gaps = 23/255 (9%)
 Frame = -1

Query: 969 ACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSWRKMWLLRPRVRTDGI 790
           +CVCRKW+YTIRNPVFWR ACLKAWQ SG +ENY+I+QSKY+ SWRKMWL RPR+RTDG+
Sbjct: 86  SCVCRKWKYTIRNPVFWRNACLKAWQLSGIVENYRILQSKYDGSWRKMWLSRPRLRTDGL 145

Query: 789 YVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQIVKDVAKSMTFHASK 610
           YVSRNTYI  GVAEWKITNPVH+VCYFRY+RFFPSGRF YKNSSQ VKDVAK M F +SK
Sbjct: 146 YVSRNTYIRAGVAEWKITNPVHVVCYFRYLRFFPSGRFLYKNSSQKVKDVAKCMNFRSSK 205

Query: 609 ADSIPSRKREEADSVFSGHYTLSQDEVDAAFPYPGLHPTVLRLQLRLRGTIVGANNRMDI 430
                      AD VF GHYTLS D+V+AA  YPG+ PTVLR++LR+RGT  GANNRMD+
Sbjct: 206 -----------ADCVFGGHYTLSDDKVEAAVLYPGMRPTVLRIRLRIRGTTSGANNRMDL 254

Query: 429 LSLVTS-----------------------KETHNPDVPAVSHRRGLNPFVFVPFEEVETS 319
           +SLVTS                        ETHNPDVPAVSH+RG+ PFVFVPFEEVETS
Sbjct: 255 ISLVTSGVNSSEASAPEEDILGVVEGWQDDETHNPDVPAVSHKRGMTPFVFVPFEEVETS 314

Query: 318 VLNLPVDKMDYYLPG 274
           VLNLPV+KMDY++PG
Sbjct: 315 VLNLPVEKMDYFVPG 329


>ref|XP_003634429.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein 7-like [Vitis
           vinifera]
          Length = 327

 Score =  362 bits (928), Expect = 1e-97
 Identities = 178/255 (69%), Positives = 196/255 (76%), Gaps = 23/255 (9%)
 Frame = -1

Query: 969 ACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSWRKMWLLRPRVRTDGI 790
           ACVCRKWRYTIRNPVFWR+ACLKAWQ SG +ENYKI+QS+YE SWRKMWLLRPRVRTDG+
Sbjct: 84  ACVCRKWRYTIRNPVFWRSACLKAWQLSGVVENYKILQSRYESSWRKMWLLRPRVRTDGL 143

Query: 789 YVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQIVKDVAKSMTFHASK 610
           YVSRNTYI  GVAEW++TNPVH+VCYFRY+RFFPSGRF YKNSSQ VKDV K M   ASK
Sbjct: 144 YVSRNTYIRAGVAEWRVTNPVHVVCYFRYIRFFPSGRFLYKNSSQKVKDVVKCMNSRASK 203

Query: 609 ADSIPSRKREEADSVFSGHYTLSQDEVDAAFPYPGLHPTVLRLQLRLRGTIVGANNRMDI 430
                      AD VFSGHYTLS D+++AA  YPG+ PTV R++LRLRGT  GANNRMD+
Sbjct: 204 -----------ADCVFSGHYTLSDDKIEAAVLYPGMRPTVWRIRLRLRGTTAGANNRMDL 252

Query: 429 LSLVTS-----------------------KETHNPDVPAVSHRRGLNPFVFVPFEEVETS 319
           LSLVTS                        ETHNPDVPAVSH+RGL  FVFVPFEEVETS
Sbjct: 253 LSLVTSGVSDNEVNGPDEDILGVVEGWEEDETHNPDVPAVSHKRGLKAFVFVPFEEVETS 312

Query: 318 VLNLPVDKMDYYLPG 274
            LNLPVDKMDYY+ G
Sbjct: 313 DLNLPVDKMDYYVAG 327


>gb|AFK44794.1| unknown [Lotus japonicus]
          Length = 329

 Score =  361 bits (927), Expect = 2e-97
 Identities = 176/255 (69%), Positives = 198/255 (77%), Gaps = 23/255 (9%)
 Frame = -1

Query: 969 ACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSWRKMWLLRPRVRTDGI 790
           +CVCRKW+YTIRNPVFWR ACLKAWQ SG +ENYKI+QSKY+ SWRKMWLLRPR+RTDG+
Sbjct: 86  SCVCRKWKYTIRNPVFWRHACLKAWQFSGVVENYKILQSKYDGSWRKMWLLRPRLRTDGL 145

Query: 789 YVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQIVKDVAKSMTFHASK 610
           YVSRNTYI  GVAEWKITNPVH+VCYFRY+RFFPSGRF YKNSSQ VKDV K M F +SK
Sbjct: 146 YVSRNTYIRAGVAEWKITNPVHVVCYFRYIRFFPSGRFLYKNSSQKVKDVVKCMNFRSSK 205

Query: 609 ADSIPSRKREEADSVFSGHYTLSQDEVDAAFPYPGLHPTVLRLQLRLRGTIVGANNRMDI 430
                      A+ VF G+YTLS D+V+AA  YPGL PTVLR++LRLRGT  GANNRMD+
Sbjct: 206 -----------AECVFGGNYTLSDDKVEAAVLYPGLRPTVLRIRLRLRGTATGANNRMDL 254

Query: 429 LSLVTS-----------------------KETHNPDVPAVSHRRGLNPFVFVPFEEVETS 319
           +SLVTS                        ETHNPDVPAVSH+RG+ PFVFVPFEEVE S
Sbjct: 255 ISLVTSGVNSSEASAPEEDILGVVDGWQDDETHNPDVPAVSHKRGMAPFVFVPFEEVEAS 314

Query: 318 VLNLPVDKMDYYLPG 274
           VLNLPV+KMDYY+PG
Sbjct: 315 VLNLPVEKMDYYVPG 329


>ref|XP_004165186.1| PREDICTED: F-box protein 7-like [Cucumis sativus]
          Length = 327

 Score =  360 bits (923), Expect = 5e-97
 Identities = 173/255 (67%), Positives = 195/255 (76%), Gaps = 23/255 (9%)
 Frame = -1

Query: 969 ACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSWRKMWLLRPRVRTDGI 790
           +CVCRKWRYTIRNPVFWR ACLKAWQ SG +ENYK +QS Y+ SWRKMWLLRPR+RTDG+
Sbjct: 84  SCVCRKWRYTIRNPVFWRNACLKAWQLSGVVENYKFLQSMYDGSWRKMWLLRPRIRTDGL 143

Query: 789 YVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQIVKDVAKSMTFHASK 610
           YVSRNTYI  G+AEWKITNPVHLVCYFRY+RFFPSGRF YKNSSQ +KDVAK M F ASK
Sbjct: 144 YVSRNTYIRAGIAEWKITNPVHLVCYFRYIRFFPSGRFLYKNSSQKIKDVAKCMNFRASK 203

Query: 609 ADSIPSRKREEADSVFSGHYTLSQDEVDAAFPYPGLHPTVLRLQLRLRGTIVGANNRMDI 430
           AD I           F GHYTLS D+V+AA  Y G  PTVLR+++RLRGT  GANNRMD+
Sbjct: 204 ADCI-----------FGGHYTLSDDKVEAAVLYSGARPTVLRIRMRLRGTSTGANNRMDL 252

Query: 429 LSLVTS-----------------------KETHNPDVPAVSHRRGLNPFVFVPFEEVETS 319
           L+LVTS                        ETHNPDVPAVSH+RGL PF+FVPF++VETS
Sbjct: 253 LTLVTSGMNNNEVGDPEEDILGIVERWRDDETHNPDVPAVSHKRGLTPFIFVPFDQVETS 312

Query: 318 VLNLPVDKMDYYLPG 274
            LNLPVDKMDY++PG
Sbjct: 313 ELNLPVDKMDYFVPG 327


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