BLASTX nr result

ID: Coptis21_contig00001357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001357
         (1633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm...   156   1e-35
emb|CBI29694.3| unnamed protein product [Vitis vinifera]              156   1e-35
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]   136   1e-29
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852...   136   2e-29
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-28

>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
           gi|223534215|gb|EEF35930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score =  156 bits (395), Expect = 1e-35
 Identities = 103/217 (47%), Positives = 134/217 (61%), Gaps = 5/217 (2%)
 Frame = +3

Query: 3   EQQIQNLPSEKEKRPPRSSNIRSALRDNLSSVSHPACGADFDGKRTVDVIGSEPHG-SGF 179
           EQQIQ+   EKEKR PR ++++  L+D              +G      +G++ HG SG 
Sbjct: 291 EQQIQSSNLEKEKRLPRPAHVQLVLKD-------------VNGSSDDKFVGNDLHGFSGE 337

Query: 180 INDKRTKNKDRPDRTVWIH-RRSDGFHGNDDTLSLSESLENMSIPHHTPATGTSKLGDDI 356
             +KRT+NKDRPDR VW   RRSDG + +D++LS S S        HT        G D 
Sbjct: 338 KQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSSSASQST-----HT--------GQDS 384

Query: 357 SGNHRNPSSSHVDMRVDQPNSSRSGEVKTIGSIRSS--SMENGSHRYGGRRGPAQGMKDV 530
           S  +        D++VD  NS RSG+VKT+GS RSS  S++NGSH++ GRRGP+  ++D 
Sbjct: 385 SQGNLG------DIKVDSSNS-RSGDVKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDA 437

Query: 531 DGSLYSSEGKPTKRGG-ATGYGSHEKQVWVQKSGSGT 638
           DGS  S EGKP+KRGG A+GYGSHEKQVWVQKS SG+
Sbjct: 438 DGS--SLEGKPSKRGGGASGYGSHEKQVWVQKSSSGS 472


>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  156 bits (395), Expect = 1e-35
 Identities = 99/217 (45%), Positives = 124/217 (57%), Gaps = 6/217 (2%)
 Frame = +3

Query: 3   EQQIQNLPSEKEKRPPRSSNIRSALRDNLSSVSHPACGADFDGKRTVDVIGSEPHGSGFI 182
           EQQ Q    EKEKRPPR  +I+ A ++              +G +   V+G++ H   F+
Sbjct: 339 EQQSQASNLEKEKRPPRPPHIQLASKET-------------NGAQDDKVVGNDVHS--FV 383

Query: 183 N---DKRTKNKDRPDRTVWIH-RRSDGFHGNDDTLSLSESLENMSIPHHTPATGTSKLGD 350
           +   DKRT+NKDRPDR VW   RRSDG H +D++LS S S    S               
Sbjct: 384 SEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSS--------------- 428

Query: 351 DISGNHRNPSSSHVDMRVDQPNSSRSGEVKTIGSIRS--SSMENGSHRYGGRRGPAQGMK 524
                   P  SH +MR D  N+ RSGEVK +GS R   S+++NGSH++ GRRGP   +K
Sbjct: 429 ------DFPEGSHGEMRSDMSNA-RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVK 481

Query: 525 DVDGSLYSSEGKPTKRGGATGYGSHEKQVWVQKSGSG 635
           D DGS   SEGK +KRG A GYGSHEKQVWVQKS SG
Sbjct: 482 DADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSSG 518


>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
          Length = 304

 Score =  136 bits (343), Expect = 1e-29
 Identities = 89/207 (42%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
 Frame = +3

Query: 3   EQQIQNLPSEKEKRPPRSSNIRSALRDNLSSVSHPACGADFDGKRTVDVIGSEPHGSGFI 182
           EQQ Q    EKEKRPPR  +I+ A ++              +G +   V+G++ H   F+
Sbjct: 84  EQQSQASNLEKEKRPPRPPHIQLASKET-------------NGAQDDKVVGNDVHS--FV 128

Query: 183 N---DKRTKNKDRPDRTVWIH-RRSDGFHGNDDTLSLSESLENMSIPHHTPATGTSKLGD 350
           +   DKRT+NKDRPDR VW   RRSDG H +D++LS S S    S               
Sbjct: 129 SEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSS--------------- 173

Query: 351 DISGNHRNPSSSHVDMRVDQPNSSRSGEVKTIGSIRS--SSMENGSHRYGGRRGPAQGMK 524
                   P  SH +MR D  N+ RSGEVK +GS R   S+++NGSH++ GRRGP   +K
Sbjct: 174 ------DFPEGSHGEMRSDMSNA-RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVK 226

Query: 525 DVDGSLYSSEGKPTKRGGATGYGSHEK 605
           D DGS   SEGK +KRG A GYGSHE+
Sbjct: 227 DADGSSIVSEGKHSKRGSAPGYGSHEE 253


>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
          Length = 322

 Score =  136 bits (342), Expect = 2e-29
 Identities = 89/206 (43%), Positives = 114/206 (55%), Gaps = 6/206 (2%)
 Frame = +3

Query: 3   EQQIQNLPSEKEKRPPRSSNIRSALRDNLSSVSHPACGADFDGKRTVDVIGSEPHGSGFI 182
           EQQ Q    EKEKRPPR  +I+ A ++              +G +   V+G++ H   F+
Sbjct: 128 EQQSQASNLEKEKRPPRPPHIQLASKET-------------NGAQDDKVVGNDVHS--FV 172

Query: 183 N---DKRTKNKDRPDRTVWIH-RRSDGFHGNDDTLSLSESLENMSIPHHTPATGTSKLGD 350
           +   DKRT+NKDRPDR VW   RRSDG H +D++LS S S    S               
Sbjct: 173 SEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSS--------------- 217

Query: 351 DISGNHRNPSSSHVDMRVDQPNSSRSGEVKTIGSIRS--SSMENGSHRYGGRRGPAQGMK 524
                   P  SH +MR D  N+ RSGEVK +GS R   S+++NGSH++ GRRGP   +K
Sbjct: 218 ------DFPEGSHGEMRSDMSNA-RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVK 270

Query: 525 DVDGSLYSSEGKPTKRGGATGYGSHE 602
           D DGS   SEGK +KRG A GYGSHE
Sbjct: 271 DADGSSIVSEGKHSKRGSAPGYGSHE 296


>ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|222839085|gb|EEE77436.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  132 bits (331), Expect = 3e-28
 Identities = 94/221 (42%), Positives = 122/221 (55%), Gaps = 13/221 (5%)
 Frame = +3

Query: 3   EQQIQNLPSEKEKRPPRSSNIRSALRDNLSSVSHPACGADFDGKRTVDVIGSEPHGSGFI 182
           E Q+Q    EKEKRPPR  + +  L+D              +G     V+G++ HG  F 
Sbjct: 341 EPQMQTSNLEKEKRPPRPPHAQLGLKDA-------------NGTPDDKVVGNDLHG--FP 385

Query: 183 NDK---RTKNKDRPDRTVWIH-RRSDGFHGNDDTLSLSESLENMSIPHHTPATGTSKLGD 350
           N+K   RT+NKDRPDR VW   RRSDG + +D++L  S S    S+             D
Sbjct: 386 NEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLLSSASQSTQSV------------FD 433

Query: 351 DISGNHRNPSSSHVDMRVDQPNSSRSGEVKTIGSIRS--SSMENGSHRYGGRRGPAQGMK 524
              GNH        D++VD  N  RSGEVK +GS R   SS++NGSH++ GRRGP+  ++
Sbjct: 434 SSQGNHG-------DVKVDSLNL-RSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVR 485

Query: 525 DVDGSLYSSEGKPTKRGGATGYGSHE-------KQVWVQKS 626
           D DGS  + E K  KRGG++GYGSHE       KQVWVQKS
Sbjct: 486 DADGS--TVEAKTPKRGGSSGYGSHEVCSLDSQKQVWVQKS 524


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