BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001337
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulf...   344   2e-92
ref|XP_002319934.1| predicted protein [Populus trichocarpa] gi|2...   343   4e-92
gb|AFK33315.1| unknown [Lotus japonicus]                              342   6e-92
gb|ACU14088.1| unknown [Glycine max]                                  342   1e-91
ref|XP_002325684.1| predicted protein [Populus trichocarpa] gi|1...   341   1e-91

>ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|147826727|emb|CAN66108.1| hypothetical protein
           VITISV_020089 [Vitis vinifera]
           gi|302143099|emb|CBI20394.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score =  344 bits (883), Expect = 2e-92
 Identities = 165/228 (72%), Positives = 183/228 (80%), Gaps = 1/228 (0%)
 Frame = +1

Query: 118 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTN-LIGKEKGMNITCMATSIPADRVP 294
           MA +TLSP T S+LCS +NG+ SP  A++ K T+T+  +GK KG+ I C ATSIPADRVP
Sbjct: 1   MAASTLSPATSSQLCSIRNGVLSPSHALLPKLTRTSPFVGKGKGLKIKCQATSIPADRVP 60

Query: 295 DMSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXXXXXXXTIAKDALGNDVLAAEWLK 474
           DM KR+            P+AGML+PYA FF            +AKDALGNDV+A EWLK
Sbjct: 61  DMGKRKLMNLLLLGAISLPSAGMLIPYATFFAPPGTGSAGGGIVAKDALGNDVIADEWLK 120

Query: 475 VHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGS 654
            HGPGDRTLTQGLKGDPTYLVVE+DKTLATYGINAVCTHLGCVVP+N AENKFICPCHGS
Sbjct: 121 THGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGS 180

Query: 655 QYNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 798
           QYNNQG VVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTG+DPWWA
Sbjct: 181 QYNNQGRVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGEDPWWA 228


>ref|XP_002319934.1| predicted protein [Populus trichocarpa] gi|222858310|gb|EEE95857.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  343 bits (880), Expect = 4e-92
 Identities = 161/227 (70%), Positives = 180/227 (79%), Gaps = 1/227 (0%)
 Frame = +1

Query: 118 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTNLIGKEKGMNITCMATSIPADR-VP 294
           MA+TTLSP TPS+LCSSK+GMFSP  A  +K  +TN++ KEKGM I C ATSIPAD  VP
Sbjct: 1   MASTTLSPATPSQLCSSKSGMFSPTHAAFVKPARTNMVTKEKGMRIACQATSIPADDGVP 60

Query: 295 DMSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXXXXXXXTIAKDALGNDVLAAEWLK 474
           DM KRE            PTAGML+PY  FF           T+AKDALGND++  +WLK
Sbjct: 61  DMGKRELMNLLLLGALSLPTAGMLIPYTYFFVPSGLGGGGGGTVAKDALGNDIVVEQWLK 120

Query: 475 VHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGS 654
            HGPGDRTL+QGLKGDPTYLVVE D+TLATYGINAVCTHLGCVVP+N+AE KFICPCHGS
Sbjct: 121 THGPGDRTLSQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPWNQAEKKFICPCHGS 180

Query: 655 QYNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWW 795
           QYN+QG VVRGPAPLSLALAH D+DDGKV+FVPWVETDFRTG DPWW
Sbjct: 181 QYNDQGRVVRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDDPWW 227


>gb|AFK33315.1| unknown [Lotus japonicus]
          Length = 227

 Score =  342 bits (878), Expect = 6e-92
 Identities = 160/227 (70%), Positives = 181/227 (79%)
 Frame = +1

Query: 118 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTNLIGKEKGMNITCMATSIPADRVPD 297
           M++TTLSP TPS+LCS K+G+F P QA+++K  +  ++GK KG+ I CMATSIPADRVPD
Sbjct: 1   MSSTTLSPVTPSQLCSGKSGIFCPSQALLVKPARNQMVGKAKGIRIACMATSIPADRVPD 60

Query: 298 MSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXXXXXXXTIAKDALGNDVLAAEWLKV 477
           M KR+            P+AGMLVPYA FF           TIAKDA+GNDV+A +WLK 
Sbjct: 61  MEKRKLLNLLLLGAISLPSAGMLVPYATFFAPPGSGSATGGTIAKDAIGNDVVAEQWLKA 120

Query: 478 HGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGSQ 657
           HGPGDRTLTQGLKGDPTYLVVE D+TLATYGINAVCTHLGCVVPFN AE KFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPFNTAEKKFICPCHGSQ 180

Query: 658 YNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 798
           YN+QG VVRGPAPLSLALAH D+ DGKV+FVPWVETDFRTG  PWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALAHCDVVDGKVVFVPWVETDFRTGDAPWWA 227


>gb|ACU14088.1| unknown [Glycine max]
          Length = 227

 Score =  342 bits (876), Expect = 1e-91
 Identities = 159/227 (70%), Positives = 179/227 (78%)
 Frame = +1

Query: 118 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTNLIGKEKGMNITCMATSIPADRVPD 297
           MA+TTLSP TPS+LCS K+G+FSP QA+++K  K  ++GK KGM I C ATSIPADRVPD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFSPSQALLVKPVKRQMMGKSKGMRIACQATSIPADRVPD 60

Query: 298 MSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXXXXXXXTIAKDALGNDVLAAEWLKV 477
           M KR+            P+AGML+PY  FF           T+AKDA+GNDV+A  WLK 
Sbjct: 61  MGKRQLMNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120

Query: 478 HGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGSQ 657
           HGPGDRTL QGLKGDPTYLVVE D+TLATY INAVCTHLGCVVP+N+AENKFICPCHGSQ
Sbjct: 121 HGPGDRTLAQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNQAENKFICPCHGSQ 180

Query: 658 YNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 798
           YN+QG V RGPAPLSLALAH DIDDGKV+FVPWVETDFRTG  PWWA
Sbjct: 181 YNDQGRVARGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227


>ref|XP_002325684.1| predicted protein [Populus trichocarpa] gi|118486166|gb|ABK94926.1|
           unknown [Populus trichocarpa]
           gi|118487342|gb|ABK95499.1| unknown [Populus
           trichocarpa] gi|222862559|gb|EEF00066.1| predicted
           protein [Populus trichocarpa]
          Length = 228

 Score =  341 bits (875), Expect = 1e-91
 Identities = 160/228 (70%), Positives = 183/228 (80%), Gaps = 1/228 (0%)
 Frame = +1

Query: 118 MATTTLSPCTPSKLCSSKNGMFSPCQAVMLKSTKTNLIGKEKGMNITCMATSIPAD-RVP 294
           MA++TLSP TPS+LCSSK+GMFSP  AV +K T+TN++ KE+GM I+C ATS+PAD RVP
Sbjct: 1   MASSTLSPATPSQLCSSKSGMFSPTHAVFVKPTRTNMVLKERGMRISCQATSVPADDRVP 60

Query: 295 DMSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXXXXXXXTIAKDALGNDVLAAEWLK 474
           DM KRE            PTAGMLVPY  FF           T+AKDALGND++A +WL 
Sbjct: 61  DMGKRELMNLLLLGALSLPTAGMLVPYTYFFVPTGLGGGGGGTVAKDALGNDIVAEQWLN 120

Query: 475 VHGPGDRTLTQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGS 654
            HGPGDRTL+QGLKGDPTYLVVE D+ LATYGINAVCTHLGCVVP+N+AE KFICPCHGS
Sbjct: 121 THGPGDRTLSQGLKGDPTYLVVEKDRVLATYGINAVCTHLGCVVPWNQAEKKFICPCHGS 180

Query: 655 QYNNQGLVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 798
           QYN+QG VVRGPAPLSLALAH D+DDGKV+FVPWVETDFRTG  PWW+
Sbjct: 181 QYNDQGRVVRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWS 228