BLASTX nr result

ID: Coptis21_contig00001335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001335
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237535.1| thioredoxin h1 [Glycine max] gi|157781191|gb...   191   2e-46
ref|XP_002310830.1| thioredoxin h [Populus trichocarpa] gi|22285...   188   7e-46
gb|ABK92669.1| unknown [Populus trichocarpa]                          188   7e-46
ref|NP_001238579.1| uncharacterized protein LOC100499701 [Glycin...   187   2e-45
ref|XP_002534131.1| Thioredoxin H-type [Ricinus communis] gi|111...   186   4e-45

>ref|NP_001237535.1| thioredoxin h1 [Glycine max] gi|157781191|gb|ABV71991.1|
           thioredoxin h1 [Glycine max]
          Length = 120

 Score =  191 bits (484), Expect = 2e-46
 Identities = 86/116 (74%), Positives = 105/116 (90%)
 Frame = -2

Query: 583 MAGSTEEGQVISCHSLEAWNEQLQKGNDSKKLVVIDFTASWCGPCRVISPVLAELAKKQT 404
           MAGS+EEGQVISCH++E WN+QLQKGN+SKKL+V+DFTASWCGPCR I+P LAELAKK T
Sbjct: 1   MAGSSEEGQVISCHTVEEWNDQLQKGNESKKLIVVDFTASWCGPCRFIAPFLAELAKKFT 60

Query: 403 NVVFLKVDVDELKTVAADWEVEAMPTFIFLKEGKIVDKIVGAKKDDLQSAITKHSA 236
           +V+FLKVDVDELK+V+ DW +EAMPTF+F+KEG ++DK+VGAKKD+LQ  I KH A
Sbjct: 61  SVIFLKVDVDELKSVSQDWAIEAMPTFVFVKEGTLLDKVVGAKKDELQQKIQKHVA 116


>ref|XP_002310830.1| thioredoxin h [Populus trichocarpa] gi|222853733|gb|EEE91280.1|
           thioredoxin h [Populus trichocarpa]
          Length = 117

 Score =  188 bits (478), Expect = 7e-46
 Identities = 87/113 (76%), Positives = 103/113 (91%)
 Frame = -2

Query: 574 STEEGQVISCHSLEAWNEQLQKGNDSKKLVVIDFTASWCGPCRVISPVLAELAKKQTNVV 395
           + E+GQVI CH++EAW+EQLQ+GN+SKKLVVIDF ASWCGPCRVI+P LAELA+K  +V+
Sbjct: 2   AAEDGQVIGCHTVEAWDEQLQRGNESKKLVVIDFAASWCGPCRVIAPFLAELARKLPDVI 61

Query: 394 FLKVDVDELKTVAADWEVEAMPTFIFLKEGKIVDKIVGAKKDDLQSAITKHSA 236
           FLKVDVDELKTVA DW VEAMPTF+FLKEGKIVDK+VGA+KD+LQ AI KH+A
Sbjct: 62  FLKVDVDELKTVAQDWAVEAMPTFMFLKEGKIVDKVVGARKDELQQAIAKHTA 114


>gb|ABK92669.1| unknown [Populus trichocarpa]
          Length = 122

 Score =  188 bits (478), Expect = 7e-46
 Identities = 87/113 (76%), Positives = 103/113 (91%)
 Frame = -2

Query: 574 STEEGQVISCHSLEAWNEQLQKGNDSKKLVVIDFTASWCGPCRVISPVLAELAKKQTNVV 395
           + E+GQVI CH++EAW+EQLQ+GN+SKKLVVIDF ASWCGPCRVI+P LAELA+K  +V+
Sbjct: 2   AAEDGQVIGCHTVEAWDEQLQRGNESKKLVVIDFAASWCGPCRVIAPFLAELARKLPDVI 61

Query: 394 FLKVDVDELKTVAADWEVEAMPTFIFLKEGKIVDKIVGAKKDDLQSAITKHSA 236
           FLKVDVDELKTVA DW VEAMPTF+FLKEGKIVDK+VGA+KD+LQ AI KH+A
Sbjct: 62  FLKVDVDELKTVAQDWAVEAMPTFMFLKEGKIVDKVVGARKDELQQAIAKHTA 114


>ref|NP_001238579.1| uncharacterized protein LOC100499701 [Glycine max]
           gi|255625907|gb|ACU13298.1| unknown [Glycine max]
          Length = 120

 Score =  187 bits (474), Expect = 2e-45
 Identities = 85/116 (73%), Positives = 104/116 (89%)
 Frame = -2

Query: 583 MAGSTEEGQVISCHSLEAWNEQLQKGNDSKKLVVIDFTASWCGPCRVISPVLAELAKKQT 404
           MAGS+EEGQVISCH+++AWN+QLQKGN SKKL+V+DFTASWCGPCR I+P LAELAKK T
Sbjct: 1   MAGSSEEGQVISCHTVDAWNDQLQKGNQSKKLIVVDFTASWCGPCRFIAPFLAELAKKFT 60

Query: 403 NVVFLKVDVDELKTVAADWEVEAMPTFIFLKEGKIVDKIVGAKKDDLQSAITKHSA 236
           +VVFLKVDVDELK+V+ DW +EAMPTF+F+KEG ++ K+VGAKKD+LQ  I K+ A
Sbjct: 61  SVVFLKVDVDELKSVSQDWAIEAMPTFVFVKEGTLLSKVVGAKKDELQQTIEKYVA 116


>ref|XP_002534131.1| Thioredoxin H-type [Ricinus communis]
           gi|11135282|sp|Q43636.1|TRXH_RICCO RecName:
           Full=Thioredoxin H-type; Short=Trx-H
           gi|1255954|emb|CAA94534.1| thioredoxin [Ricinus
           communis] gi|223525803|gb|EEF28248.1| Thioredoxin H-type
           [Ricinus communis]
          Length = 118

 Score =  186 bits (472), Expect = 4e-45
 Identities = 86/113 (76%), Positives = 99/113 (87%)
 Frame = -2

Query: 574 STEEGQVISCHSLEAWNEQLQKGNDSKKLVVIDFTASWCGPCRVISPVLAELAKKQTNVV 395
           + EEGQVI CH++EAWNEQLQKGND+K L+V+DFTASWCGPCR I+P LAELAKK  NV 
Sbjct: 2   AAEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVT 61

Query: 394 FLKVDVDELKTVAADWEVEAMPTFIFLKEGKIVDKIVGAKKDDLQSAITKHSA 236
           FLKVDVDELKTVA +W VE+MPTF+FLKEGKI+DK+VGAKKD+LQ  I KH A
Sbjct: 62  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMA 114


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