BLASTX nr result

ID: Coptis21_contig00001330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001330
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [V...   231   2e-58
ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [C...   226   8e-57
ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [G...   224   2e-56
ref|XP_002303090.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [G...   213   4e-53

>ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
          Length = 517

 Score =  231 bits (589), Expect = 2e-58
 Identities = 158/357 (44%), Positives = 180/357 (50%), Gaps = 41/357 (11%)
 Frame = -3

Query: 950  LWQNGQVVLQSQTQR--KKSIXXXXXXXXXNAPPYQ---------------LFMQEDEMA 822
            LWQNGQVV+Q Q QR  KKS            PP Q               LFMQEDEMA
Sbjct: 37   LWQNGQVVMQIQNQRSFKKSQPSKFPIQDAVLPPEQSKIRSSAPVDESSAQLFMQEDEMA 96

Query: 821  SWLHYPLDDDNNDFCSDLLYXXXXXXXXXXXXXXXXXXXXPLIXXXXXXXXXXXXXXKRC 642
            SWLHYPLD    DFC+DLL                                      +R 
Sbjct: 97   SWLHYPLD----DFCADLLDPTPCVNASPPPARPNLSPDVRQPEERPAATKPPIPPARRV 152

Query: 641  SR----------PNWRAGSESQPSGASGV-RESTVVESNEISTVGLDRR----------V 525
                        P        +PS +     ESTVV+S++   V    R          +
Sbjct: 153  ELDSKVHNFLHFPRKSTAESGEPSSSRPAGMESTVVDSSDTPGVCQQSRTSPAEWCKAEL 212

Query: 524  MNNGLDENLGGSGSMNQDTATEQDIEVTMTXXXXXXXXXAEPLLANKP-PSSSNNDRKRK 348
             N+G     G + +           E+TMT                +P P +  +DRKRK
Sbjct: 213  ANSGYGTIGGATEAATSAAGEHTTFELTMTSSPEGSGSGGSASAGAEPTPKAPADDRKRK 272

Query: 347  GRE--ENEEHDDEDAKFEATDTKKQVRGXXXXXXXXXAEVHNLSERRRRDRINEKMKALQ 174
            GRE  +  E+  ED +FE+ D KKQVRG         AEVHNLSERRRRDRINEKMKALQ
Sbjct: 273  GREGDDTAEYQSEDVEFESADAKKQVRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQ 332

Query: 173  ELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMVFPGVQQYMSPMGMGM 3
            ELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPM++PGVQQYM  MGMGM
Sbjct: 333  ELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMMYPGVQQYMPQMGMGM 389


>ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
          Length = 529

 Score =  226 bits (575), Expect = 8e-57
 Identities = 161/368 (43%), Positives = 195/368 (52%), Gaps = 52/368 (14%)
 Frame = -3

Query: 950  LWQNGQVVLQSQTQRK----------KSIXXXXXXXXXNAPP------YQLFMQEDEMAS 819
            LWQNGQVV  SQ QR            SI           P       ++LFMQEDEMAS
Sbjct: 45   LWQNGQVVTHSQNQRSFRKSPPSKFDVSIPQEQAATREIRPSTQLEEHHELFMQEDEMAS 104

Query: 818  WLHYPLDDDNNDFCSDLLYXXXXXXXXXXXXXXXXXXXXPLIXXXXXXXXXXXXXXKRCS 639
            WL+YPL +D+N FCSDLL+                      +                C 
Sbjct: 105  WLNYPLVEDHN-FCSDLLFPAITAPLCANPQPDIRPSATATLTLTPRPPIPP------CR 157

Query: 638  RPNW---------RAGSESQPSGASG-VRESTVVESNEISTVGLDRR-----------VM 522
            RP           +A  ES+PS +   VRESTVV+S +  +VG + R           V+
Sbjct: 158  RPEVQTSVQFSRNKATVESEPSNSKVMVRESTVVDSCDTPSVGPESRASEMARRKLVEVV 217

Query: 521  NNG-------------LDENLGGSGSMNQDTATEQDIEVTMTXXXXXXXXXAEPLLANKP 381
            N G                ++GG G   ++  T    E+T+T         AEP      
Sbjct: 218  NGGGVRYEIARGSDGVRGASVGGDGIGEKEMMT---CEMTVTSSPGGSSASAEPAC---- 270

Query: 380  PSSSNNDRKRKGRE-ENEEHDDEDAKFEATDTKKQVRGXXXXXXXXXAEVHNLSERRRRD 204
            P  + +DRKRKGR  ++ E   ED ++E+ D KKQ+RG         AEVHNLSERRRRD
Sbjct: 271  PKLAVDDRKRKGRALDDTECQSEDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRD 330

Query: 203  RINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMVFPGVQQYM 24
            RINEKMKALQELIPRCNK+DKASMLDEAIEYLK+LQLQVQMMSMGC M+PM+FPGVQQY+
Sbjct: 331  RINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMMSMGCGMMPMMFPGVQQYL 390

Query: 23   -SPMGMGM 3
              PMGMGM
Sbjct: 391  PPPMGMGM 398


>ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
          Length = 491

 Score =  224 bits (571), Expect = 2e-56
 Identities = 150/344 (43%), Positives = 182/344 (52%), Gaps = 28/344 (8%)
 Frame = -3

Query: 950  LWQNGQVVLQSQTQRKKSIXXXXXXXXXNAPPYQ-------------LFMQEDEMASWLH 810
            LWQNGQVV+Q+Q QR               P  +             LFMQEDEMASWLH
Sbjct: 27   LWQNGQVVMQNQNQRPFRKQPPTTDGDGPIPAREIRSSEAENYNSQHLFMQEDEMASWLH 86

Query: 809  YPLDDD-----NNDFCSDLLYXXXXXXXXXXXXXXXXXXXXPLIXXXXXXXXXXXXXXKR 645
            YP+ +D     ++DFC+D+LY                                     +R
Sbjct: 87   YPIHEDPPPFDHHDFCADILYPPPNATASQNQSSASVQSSVRTTELQHPAPRPPIPPPRR 146

Query: 644  CSRPNWRA---------GSESQPSGASGVRESTVVESNEISTVGLDRRVMNNGLDENLGG 492
                  R          G+ S  S A+   + TV  +  + T    R  ++    +    
Sbjct: 147  QEHTLSRIHNFTHFAKHGNASSSSKAAAPAQPTVATAEHVET---GRASVSAAAGKTPAS 203

Query: 491  SGSMNQDTATEQDIEVTMTXXXXXXXXXAEPLLANKPPSSSNNDRKRKGREENE-EHDDE 315
             G   ++TAT    +VT+T         AEP+   + P  +   RKRKGRE+ E E+  E
Sbjct: 204  DGG--RETAT---CDVTVTSSPGGSSGSAEPV--QREPVVN---RKRKGREQEESEYQSE 253

Query: 314  DAKFEATDTKKQVRGXXXXXXXXXAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS 135
            D  FE+ + KKQVRG         AEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS
Sbjct: 254  DVDFESPEAKKQVRGSTSTKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS 313

Query: 134  MLDEAIEYLKSLQLQVQMMSMGCSMVPMVFPGVQQYMSPMGMGM 3
            MLDEAIEYLKSLQLQVQMMSMGC MVPM+FPG+QQYM PMGMG+
Sbjct: 314  MLDEAIEYLKSLQLQVQMMSMGCGMVPMIFPGIQQYMPPMGMGI 357


>ref|XP_002303090.1| predicted protein [Populus trichocarpa] gi|222844816|gb|EEE82363.1|
            predicted protein [Populus trichocarpa]
          Length = 615

 Score =  218 bits (554), Expect = 2e-54
 Identities = 164/415 (39%), Positives = 187/415 (45%), Gaps = 99/415 (23%)
 Frame = -3

Query: 950  LWQNGQVVLQSQTQRKKSIXXXXXXXXXNAPPYQL-------------------FMQEDE 828
            LWQNGQVV+ SQ  +KKS            P  QL                   FMQEDE
Sbjct: 40   LWQNGQVVMHSQRSQKKSSPPPSELDDAVLPADQLPGTKEIRSSHDQQQEHHHLFMQEDE 99

Query: 827  MASWLHYPLDDDN--NDFCSDLLYXXXXXXXXXXXXXXXXXXXXPLIXXXXXXXXXXXXX 654
            MASWL++PL+D N  +DFC+DLLY                      +             
Sbjct: 100  MASWLNHPLNDTNFDHDFCADLLYPPTASTASITREAAVTNAAASTVRGATQRMEARSYP 159

Query: 653  XKRCSRP------------------NWRAGSESQP---SGASGVRESTVVESNEISTVGL 537
                 RP                    RAG  S+    +  S VRESTVV+S E  T  +
Sbjct: 160  AVSAPRPPIPPVRRAEVVQNFAYFSRHRAGGVSESGRSNSKSVVRESTVVDSCETPTARI 219

Query: 536  DRRVMNNGLDENLG------------GSGSMNQDTATEQDIEVTMTXXXXXXXXXAE-PL 396
                     D   G             + S N++T T    E+T T         AE P 
Sbjct: 220  SETAFARSADNTCGTINGAAVAGTVSSAPSSNRETMTNP-CEMTSTSSPGCSSASAELPA 278

Query: 395  LANKPPSSSNNDRKRKGREENEEHDDE--------------------------------- 315
            L      S   DRKRKGREE  E   E                                 
Sbjct: 279  LM-----SPVEDRKRKGREEEAECHSEFIAISITMAHGNQPQSVAIRQKTQNSADSSKPL 333

Query: 314  -----------DAKFEATDTKKQVRGXXXXXXXXXAEVHNLSERRRRDRINEKMKALQEL 168
                       DA+FE+ D KK++RG         AEVHNLSERRRRDRINEKM+ALQEL
Sbjct: 334  QGRRDAANPLKDAEFESADAKKRIRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQEL 393

Query: 167  IPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMVFPGVQQYMSPMGMGM 3
            IPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPM+FPG QQYM PMG+GM
Sbjct: 394  IPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMMFPGFQQYMPPMGIGM 448


>ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
          Length = 476

 Score =  213 bits (543), Expect = 4e-53
 Identities = 147/348 (42%), Positives = 174/348 (50%), Gaps = 32/348 (9%)
 Frame = -3

Query: 950  LWQNGQVVLQSQTQRK-------------KSIXXXXXXXXXNAPPYQ----LFMQEDEMA 822
            LWQNGQVV+QSQ QR                           A  Y     LFMQEDEMA
Sbjct: 4    LWQNGQVVMQSQNQRPFRKPPQPPEANGGDGAISAREIRSSEAENYNNSQHLFMQEDEMA 63

Query: 821  SWLHYPLDDD-----NNDFCSDLLYXXXXXXXXXXXXXXXXXXXXPLIXXXXXXXXXXXX 657
            +WLHYP+ +D     ++DF +D+ Y                                   
Sbjct: 64   AWLHYPIHEDPPPFDHHDFGADIFYPPPNATASQNRGSAAVQSSFRTTELWHPAPRPPIP 123

Query: 656  XXKRCSRPNWRA---------GSESQPSGASGVRESTVVESNEISTVGLDRRVMNNGLDE 504
              +R      R          G+ S  S A+   + TVV+S E      +      G   
Sbjct: 124  PPRRPEHAPSRIHNFAHFTKHGNASSSSKAAAAAQPTVVDSCETPVATAEHA--ETGRAR 181

Query: 503  NLGGSGSMNQDTATEQDIEVTMTXXXXXXXXXAEPLLANKPPSSSNNDRKRKGREENE-E 327
               G  +++         +VT+T         AEP+   + P +   DRKRKGRE  E E
Sbjct: 182  AAAGKTAVSDGGRETATCDVTVTSSPGDSSGSAEPV--EREPMA---DRKRKGREHEESE 236

Query: 326  HDDEDAKFEATDTKKQVRGXXXXXXXXXAEVHNLSERRRRDRINEKMKALQELIPRCNKS 147
               ED  FE+ + KKQV G         AEVHNLSERRRRDRINEKMKALQELIPRCNKS
Sbjct: 237  FQSEDVDFESPEAKKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS 296

Query: 146  DKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMVFPGVQQYMSPMGMGM 3
            DKASMLDEAIEYLKSLQLQVQMMSMG  MVPM+FPG+QQYM PMGMG+
Sbjct: 297  DKASMLDEAIEYLKSLQLQVQMMSMGYGMVPMMFPGIQQYMPPMGMGI 344


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