BLASTX nr result

ID: Coptis21_contig00001322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001322
         (1715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632757.1| PREDICTED: auxin-repressed 12.5 kDa protein-...   106   2e-20
ref|XP_003528661.1| PREDICTED: uncharacterized protein LOC100820...    85   7e-14
ref|XP_002304241.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-12
gb|EEC83671.1| hypothetical protein OsI_29449 [Oryza sativa Indi...    74   9e-11
ref|XP_003578165.1| PREDICTED: uncharacterized protein LOC100826...    73   2e-10

>ref|XP_003632757.1| PREDICTED: auxin-repressed 12.5 kDa protein-like [Vitis vinifera]
            gi|297742955|emb|CBI35822.3| unnamed protein product
            [Vitis vinifera]
          Length = 126

 Score =  106 bits (264), Expect = 2e-20
 Identities = 60/129 (46%), Positives = 75/129 (58%)
 Frame = -1

Query: 1685 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSLPAAKGIMVPISEDIPISRSITIVKPVINT 1506
            MG LD  WD+T+AGP PE G GK LRK+ SL AA+   +   +++ ++RSITI+K     
Sbjct: 1    MGFLDKLWDETVAGPPPETGLGK-LRKYKSLSAARSPPIINPDEVQVTRSITILK---TN 56

Query: 1505 NNLRNFPADXXXXXXXXXXXXXXXXXXXXXXXXSDMKRLSRRKAMSEAFERAEPRSPTVY 1326
            ++ RNF  D                         D K  +RRKA  EAFERAEPRSPTVY
Sbjct: 57   SSFRNFSPDSVSVPNSPAGSSAPESPFTPGTPTGDYKTDARRKAALEAFERAEPRSPTVY 116

Query: 1325 DWVVISALD 1299
            DW+VISALD
Sbjct: 117  DWIVISALD 125


>ref|XP_003528661.1| PREDICTED: uncharacterized protein LOC100820058 isoform 2 [Glycine
            max]
          Length = 122

 Score = 84.7 bits (208), Expect = 7e-14
 Identities = 52/131 (39%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
 Frame = -1

Query: 1685 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSLPAAKGIMVPISEDIPISRSITIVKPV--I 1512
            MG L   WD+T+AGP PE G G KLRK++S      +   ++E +PISRSITIV+     
Sbjct: 3    MGFLHKLWDETLAGPAPETGLG-KLRKYNSFSGGSSVRSTVAEHVPISRSITIVRSQSGF 61

Query: 1511 NTNNLRNFPADXXXXXXXXXXXXXXXXXXXXXXXXSDMKRLSRRKAMSEAFERAEPRSPT 1332
             T    + P+                          D K+L+RRK  S   E AE RSPT
Sbjct: 62   GTTTTTSAPS----------APTTPRTPLTPEAPGGDFKKLTRRK--SSTVESAENRSPT 109

Query: 1331 VYDWVVISALD 1299
            +YDWV++SALD
Sbjct: 110  IYDWVIMSALD 120


>ref|XP_002304241.1| predicted protein [Populus trichocarpa] gi|222841673|gb|EEE79220.1|
            predicted protein [Populus trichocarpa]
          Length = 136

 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 52/137 (37%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
 Frame = -1

Query: 1685 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSL-----PAAKGIMVPISEDIPISRSITIVK 1521
            MG L   WD+T+AGP P+ G GK LRK+DS      P          ED+ I+RSITIV+
Sbjct: 1    MGFLHKLWDETLAGPMPDSGLGK-LRKYDSFSVRSSPPVDAAAANSIEDMNITRSITIVR 59

Query: 1520 PVINTNNLRNF---PADXXXXXXXXXXXXXXXXXXXXXXXXSDMKRLSRRKAMSEAFERA 1350
               ++  LRN    P                           D +R+  RK+  EA E  
Sbjct: 60   -TNSSKYLRNISVDPCSSPVSPATPSTPTTPLTPGITGTPRGDFRRIKARKSSDEALESG 118

Query: 1349 EPRSPTVYDWVVISALD 1299
            EPRS T+YDW+VI+ALD
Sbjct: 119  EPRSLTIYDWIVINALD 135


>gb|EEC83671.1| hypothetical protein OsI_29449 [Oryza sativa Indica Group]
          Length = 144

 Score = 74.3 bits (181), Expect = 9e-11
 Identities = 54/144 (37%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
 Frame = -1

Query: 1685 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSL--------PAAKGIMVPISEDIPISRSIT 1530
            MGLLD  WD+T+AGP+P+ G G KLRK+ S          AA G   P +    ++RSIT
Sbjct: 1    MGLLDQLWDETVAGPRPDSGLG-KLRKYSSFSPSSPSAAAAAPGTAPPDAPAATVTRSIT 59

Query: 1529 IVK-PVINTNNLRNFPADXXXXXXXXXXXXXXXXXXXXXXXXSDMKRLSRRK------AM 1371
            IV+ P ++  + R    +                         D  R  RRK      A 
Sbjct: 60   IVRPPSLSVPSPRGGGGEYSSSVPSSPASAPDSPFASATTPKGDSWRRLRRKPKTATDAA 119

Query: 1370 SEAFERAEPRSPTVYDWVVISALD 1299
             EA     PRSPTVYDWVVIS+LD
Sbjct: 120  PEAAAAVGPRSPTVYDWVVISSLD 143


>ref|XP_003578165.1| PREDICTED: uncharacterized protein LOC100826495 [Brachypodium
            distachyon]
          Length = 134

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
 Frame = -1

Query: 1685 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSL-PAAKGIMVPISEDIPISRSITIVKP-VI 1512
            MGLLD  WDDT+AGP+PE G GK LRK+ S  P++     P ++   ++RSITI++P  +
Sbjct: 1    MGLLDQLWDDTVAGPRPESGLGK-LRKYASFSPSSTAAAAPPADAPAVTRSITILRPPAL 59

Query: 1511 NTNNLRNFPADXXXXXXXXXXXXXXXXXXXXXXXXSDMKRLSRRKAMSEAFERAEP---R 1341
            +  +  +                                R   R A ++  + A P   R
Sbjct: 60   SVPSAGSEAGGSAPSSPASVPDSPFGTARTPRGDGWSKLRRKGRMAAADGMDAASPGTPR 119

Query: 1340 SPTVYDWVVISALD 1299
            SPTVYDWVVIS+LD
Sbjct: 120  SPTVYDWVVISSLD 133


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