BLASTX nr result

ID: Coptis21_contig00001309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001309
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA10123.1| hypothetical protein [Cicer arietinum]                 86   1e-14
ref|XP_002888446.1| hypothetical protein ARALYDRAFT_475676 [Arab...    85   2e-14
ref|XP_003553139.1| PREDICTED: uncharacterized protein LOC100817...    84   3e-14
ref|NP_564863.1| uncharacterized protein [Arabidopsis thaliana] ...    84   4e-14
gb|AAM64543.1| unknown [Arabidopsis thaliana]                          84   4e-14

>emb|CAA10123.1| hypothetical protein [Cicer arietinum]
          Length = 145

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 59/117 (50%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
 Frame = -1

Query: 521 IFID---QQPLFLDT-IQFPKYPRSMRVENKPNVVTSSLRERTKDILSVVVALLFGVGCG 354
           IFID   Q  L L+T  Q   +PR     +      SSLR+RTKDILSV +ALLFGVGCG
Sbjct: 24  IFIDRPIQHNLQLETQSQGASHPRGPLGFSTDAYDFSSLRDRTKDILSVALALLFGVGCG 83

Query: 353 ALTSATMYLAWSLITNRFEESHXXXXXXXXXDVASFKKMGYCKIPDDAVKAKEDPAP 183
           ALT+ATMYL WS+ T R E            ++ S KKMGY KIP   V A   PAP
Sbjct: 84  ALTAATMYLVWSVFTARHELRAAAYGEFSDDEIESPKKMGYVKIPAAEVAAAA-PAP 139


>ref|XP_002888446.1| hypothetical protein ARALYDRAFT_475676 [Arabidopsis lyrata subsp.
           lyrata] gi|297334287|gb|EFH64705.1| hypothetical protein
           ARALYDRAFT_475676 [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 48/84 (57%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
 Frame = -1

Query: 425 SSLRERTKDILSVVVALLFGVGCGALTSATMYLAWSLITNR--FEESHXXXXXXXXXDVA 252
           +S R+RT+DILSVVVALLFGVGCGALT+ATMYL W+L+ NR  F+            D A
Sbjct: 98  NSFRDRTRDILSVVVALLFGVGCGALTAATMYLVWALVVNRQSFDFDEEDDYENDESDAA 157

Query: 251 SFKKMGYCKIPDDAVKAKEDPAPV 180
           S KK+GY KIP  A      PAPV
Sbjct: 158 SLKKLGYVKIPAPA------PAPV 175


>ref|XP_003553139.1| PREDICTED: uncharacterized protein LOC100817673 [Glycine max]
          Length = 188

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 45/85 (52%), Positives = 54/85 (63%)
 Frame = -1

Query: 425 SSLRERTKDILSVVVALLFGVGCGALTSATMYLAWSLITNRFEESHXXXXXXXXXDVASF 246
           SSLR+RTKDILSV +ALLFGVGCGALT+ATMYL WS+ + R   +          ++ S 
Sbjct: 101 SSLRDRTKDILSVALALLFGVGCGALTAATMYLVWSVFSTRHPTAAFDDFSSDEDEIESP 160

Query: 245 KKMGYCKIPDDAVKAKEDPAPVLAK 171
           KK+GY KIP     A    AP  AK
Sbjct: 161 KKLGYVKIPATETTAAVSTAPAPAK 185


>ref|NP_564863.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6686406|gb|AAF23840.1|AC007234_12 F1E22.9
           [Arabidopsis thaliana]
           gi|14190371|gb|AAK55666.1|AF378863_1 At1g65720/F1E22_13
           [Arabidopsis thaliana]
           gi|14190497|gb|AAK55729.1|AF380648_1 At1g65720/F1E22_13
           [Arabidopsis thaliana] gi|15215869|gb|AAK91478.1|
           At1g65720/F1E22_13 [Arabidopsis thaliana]
           gi|15809746|gb|AAL06801.1| At1g65720/F1E22_13
           [Arabidopsis thaliana] gi|332196296|gb|AEE34417.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 180

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 50/86 (58%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
 Frame = -1

Query: 425 SSLRERTKDILSVVVALLFGVGCGALTSATMYLAWSLITNR----FEESHXXXXXXXXXD 258
           +S R+RT+DILSVVVALLFGVGCGALT+ATMYL W+L+ NR    FEE           D
Sbjct: 98  NSFRDRTRDILSVVVALLFGVGCGALTAATMYLVWALVVNRQSYDFEEEE-DDYENDESD 156

Query: 257 VASFKKMGYCKIPDDAVKAKEDPAPV 180
            AS KK+GY KIP  A      PAPV
Sbjct: 157 AASLKKLGYVKIPAPA------PAPV 176


>gb|AAM64543.1| unknown [Arabidopsis thaliana]
          Length = 180

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 50/86 (58%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
 Frame = -1

Query: 425 SSLRERTKDILSVVVALLFGVGCGALTSATMYLAWSLITNR----FEESHXXXXXXXXXD 258
           +S R+RT+DILSVVVALLFGVGCGALT+ATMYL W+L+ NR    FEE           D
Sbjct: 98  NSFRDRTRDILSVVVALLFGVGCGALTAATMYLVWALVVNRQSYDFEEEE-DDYENDESD 156

Query: 257 VASFKKMGYCKIPDDAVKAKEDPAPV 180
            AS KK+GY KIP  A      PAPV
Sbjct: 157 AASLKKLGYVKIPAPA------PAPV 176


Top