BLASTX nr result

ID: Coptis21_contig00001302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001302
         (1873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310543.1| predicted protein [Populus trichocarpa] gi|2...   291   3e-76
ref|XP_002528014.1| conserved hypothetical protein [Ricinus comm...   284   7e-74
ref|XP_002273632.1| PREDICTED: transcription factor HBP-1b(c1) [...   276   1e-71
ref|XP_003524316.1| PREDICTED: transcription factor TGA4-like [G...   269   2e-69
ref|XP_003630355.1| Transcription factor HBP-1b(c1) [Medicago tr...   266   1e-68

>ref|XP_002310543.1| predicted protein [Populus trichocarpa] gi|222853446|gb|EEE90993.1|
            predicted protein [Populus trichocarpa]
          Length = 244

 Score =  291 bits (746), Expect = 3e-76
 Identities = 149/231 (64%), Positives = 181/231 (78%), Gaps = 1/231 (0%)
 Frame = +1

Query: 553  RDSFNKFFQSWIDEQDRHLHELISVSKTQAETK-SSRDEQERVLRPLIDRVVQHYEDYYR 729
            R++F KFF+ W+ EQ+ +L +LIS  K     K +S    +  L+PLI+RV++HYE YYR
Sbjct: 4    RETFRKFFECWLAEQNNYLEQLISSCKDYDHNKKNSPQSSQATLQPLINRVLEHYEHYYR 63

Query: 730  TKAISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLLYSKSGLQMESKLAEIIRGL 909
             K+   K DVLS+LSPSWTSTLE AFLWIGGWRPS+AFHLLYSKSG Q+E++L E+I GL
Sbjct: 64   AKSRWAKDDVLSMLSPSWTSTLEHAFLWIGGWRPSVAFHLLYSKSGHQLEAQLHELICGL 123

Query: 910  GTGDLGDLSPSQLVSVDELQRKTIREERNITEKMAKHQESVADPSMVELSHIMTEFQNRE 1089
            GTGDLGDLS SQL  VD+LQRKTIREE  +TEK  KHQE+VAD SMVEL+H     +N  
Sbjct: 124  GTGDLGDLSGSQLTRVDQLQRKTIREENELTEKHVKHQETVADSSMVELAH-----ENTG 178

Query: 1090 IDDERVNSTLGPKKEGLQKILERADDLRLRTLNGVISILTPIQAVHFLIAA 1242
             D+ERV STL P+K+GLQ+IL+ ADDLR+RT+ GVI ILTPIQAVHFLIAA
Sbjct: 179  TDEERVESTLAPRKDGLQEILQMADDLRVRTIKGVIDILTPIQAVHFLIAA 229


>ref|XP_002528014.1| conserved hypothetical protein [Ricinus communis]
            gi|223532583|gb|EEF34370.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 271

 Score =  284 bits (726), Expect = 7e-74
 Identities = 145/243 (59%), Positives = 184/243 (75%), Gaps = 6/243 (2%)
 Frame = +1

Query: 532  MQNVETERDSFNKFFQSWIDEQDRHLHELISVSKTQAETKSSRDEQERVLRPLIDRVVQH 711
            +++  +  +SF+ FF+ W+ EQ + L ELIS SK +   K++  +    L+PLI+RV++H
Sbjct: 12   LRSTSSSHNSFHDFFEWWLVEQKQELDELISASKQKLNNKNNNHDS---LQPLINRVLEH 68

Query: 712  YEDYYRTKAISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLLYSKSGLQMESKLA 891
            YE YY  K+   K DVL++ SPSWTS LEDAFLWIGGWRPSMAFHLLYSKSGLQ+E++L 
Sbjct: 69   YEQYYSAKSKWAKHDVLAMFSPSWTSPLEDAFLWIGGWRPSMAFHLLYSKSGLQLEAQLH 128

Query: 892  EIIRGLGTGDLGDLSPSQLVSVDELQRKTIREERNITEKMAKHQESVADPSMVELSHIMT 1071
            ++IRGL TGDLGDLSP+QLV VDE QR+ IREE+NITE MAKHQ +VAD SMVEL+H ++
Sbjct: 129  DVIRGLCTGDLGDLSPNQLVQVDEFQRRIIREEKNITENMAKHQATVADTSMVELTHAIS 188

Query: 1072 EFQNREID------DERVNSTLGPKKEGLQKILERADDLRLRTLNGVISILTPIQAVHFL 1233
            + +  E         ERV STL  K EGL+K+L++ADDLRLRTL G+I ILTP Q VHFL
Sbjct: 189  KTRRDEGSSIGNEVQERVESTLKTKLEGLEKVLQKADDLRLRTLKGIIDILTPDQTVHFL 248

Query: 1234 IAA 1242
            IAA
Sbjct: 249  IAA 251


>ref|XP_002273632.1| PREDICTED: transcription factor HBP-1b(c1) [Vitis vinifera]
            gi|296082614|emb|CBI21619.3| unnamed protein product
            [Vitis vinifera]
          Length = 255

 Score =  276 bits (706), Expect = 1e-71
 Identities = 141/238 (59%), Positives = 177/238 (74%), Gaps = 1/238 (0%)
 Frame = +1

Query: 532  MQNVETERDSFNKFFQSWIDEQDRHLHELISVSKTQAETKSSRDEQERVLRPLIDRVVQH 711
            M +     + F+KFF+SW+ EQ++HL ELIS S+    T    D+ +++L PL++RVV H
Sbjct: 1    MASSPANHEGFHKFFESWLTEQNQHLQELISASRNNQHT----DDSDQILCPLVERVVSH 56

Query: 712  YEDYYRTKAISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLLYSKSGLQMESKLA 891
            Y +YY  K++S + ++LS+L+P W S LEDAFLW+GGWRPS+AFHLLYSKSGLQ ES LA
Sbjct: 57   YHNYYHAKSLSTRDNILSMLTPPWRSLLEDAFLWVGGWRPSVAFHLLYSKSGLQFESGLA 116

Query: 892  EIIRGLGTGDLGDLSPSQLVSVDELQRKTIREERNITEKMAKHQESVADPSMVELSHIMT 1071
            ++IRGL TGDLGD+S  QL  VDELQRKTIREER +TE MA+ QE+VAD  MVELS   T
Sbjct: 117  DLIRGLSTGDLGDMSHEQLCRVDELQRKTIREEREMTENMARIQETVADSKMVELSEAAT 176

Query: 1072 EFQNREID-DERVNSTLGPKKEGLQKILERADDLRLRTLNGVISILTPIQAVHFLIAA 1242
            E      D  ERV S L  K+EGL ++L +ADDLRLRTL GV+ ILTP+Q VHFLIAA
Sbjct: 177  EEGGGGDDLGERVESALKHKEEGLAEMLLKADDLRLRTLKGVLDILTPMQCVHFLIAA 234


>ref|XP_003524316.1| PREDICTED: transcription factor TGA4-like [Glycine max]
          Length = 285

 Score =  269 bits (688), Expect = 2e-69
 Identities = 142/259 (54%), Positives = 189/259 (72%), Gaps = 12/259 (4%)
 Frame = +1

Query: 502  LSVMTCLCG---PMQNVETERDSFNKFFQSWIDEQDRHLHELISVSKTQAETKSSRDEQE 672
            +SV+ C C       N+  E +SF+KFF+ WI EQ +HL +L++   TQ  +    DE+ 
Sbjct: 1    MSVVPCNCNHTTEKDNLSGESESFHKFFECWISEQKQHLKDLLAAESTQLIS----DEE- 55

Query: 673  RVLRPLIDRVVQHYEDYYRTKAISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLL 852
              L+ L D+VV+HYE YY+ K+   KQDVL++LSP+W S+LE+AFLWIGGWRPSMAFHL+
Sbjct: 56   --LQALNDKVVEHYEYYYKAKSRCAKQDVLAMLSPTWMSSLEEAFLWIGGWRPSMAFHLI 113

Query: 853  YSKSGLQMESKLAEIIRGLGTGDLGDLSPSQLVSVDELQRKTIREERNITEKMAKHQESV 1032
            YSKSGLQ E++L E+++GL T DLGDLS SQL  +DE+QR+TI EER IT+ MA+HQE+V
Sbjct: 114  YSKSGLQFEARLDEVLQGLRTHDLGDLSASQLAQLDEMQRRTILEEREITDLMARHQETV 173

Query: 1033 ADPSMVELSHIMTEF----QNREID-----DERVNSTLGPKKEGLQKILERADDLRLRTL 1185
            AD SMVELSH+++E     Q  E+D     + +V STL  K+EGL+KIL +AD+LR  TL
Sbjct: 174  ADASMVELSHVVSEMIRANQRGEVDQSKEIENKVESTLVLKEEGLEKILLKADELRFITL 233

Query: 1186 NGVISILTPIQAVHFLIAA 1242
              V+ +LTP QA+HFLIAA
Sbjct: 234  KDVVDVLTPKQAIHFLIAA 252


>ref|XP_003630355.1| Transcription factor HBP-1b(c1) [Medicago truncatula]
            gi|355524377|gb|AET04831.1| Transcription factor
            HBP-1b(c1) [Medicago truncatula]
          Length = 272

 Score =  266 bits (680), Expect = 1e-68
 Identities = 132/237 (55%), Positives = 179/237 (75%), Gaps = 6/237 (2%)
 Frame = +1

Query: 550  ERDSFNKFFQSWIDEQDRHLHELISVSKTQAETKSSRDEQERVLRPLIDRVVQHYEDYYR 729
            + +SFNKFF+ W+ EQ+++L+EL++    Q +  + R      +  LID+VV+HYE YY+
Sbjct: 11   DAESFNKFFECWMVEQNKYLNELVAAKSAQPQLTNDR------MHTLIDKVVEHYECYYK 64

Query: 730  TKAISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLLYSKSGLQMESKLAEIIRGL 909
            TK+   K+DVLS+ SP W STLE+AFLWIGGWRPSMAFHLLYSK  +Q +++L ++I+G 
Sbjct: 65   TKSSFAKKDVLSMFSPPWLSTLEEAFLWIGGWRPSMAFHLLYSKCSMQFQARLNDLIQGQ 124

Query: 910  GTGDLGDLSPSQLVSVDELQRKTIREERNITEKMAKHQESVADPSMVELSHIMTEF---- 1077
             T DLGDL+ SQL   D+LQ+KTIREER IT+ +A+HQE+VAD  MVELSH+++E     
Sbjct: 125  KTCDLGDLTASQLAEFDDLQKKTIREEREITDMLAEHQETVADAPMVELSHVVSEMIRGG 184

Query: 1078 --QNREIDDERVNSTLGPKKEGLQKILERADDLRLRTLNGVISILTPIQAVHFLIAA 1242
              + +E+ +ER+ S L PK EGL+KIL RADDLRLR L G+++ILTP QA+HFLIAA
Sbjct: 185  ENEKKEL-EERIESVLEPKVEGLEKILYRADDLRLRALQGIVNILTPKQAIHFLIAA 240


Top