BLASTX nr result

ID: Coptis21_contig00001295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001295
         (1656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger d...   482   e-133
ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|2...   480   e-133
ref|XP_002519457.1| zinc finger protein, putative [Ricinus commu...   471   e-130
gb|AFK44622.1| unknown [Lotus japonicus]                              468   e-129
ref|XP_002274709.1| PREDICTED: RING finger and CHY zinc finger d...   467   e-129

>ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein
            1 isoform 2 [Vitis vinifera]
            gi|225441159|ref|XP_002268149.1| PREDICTED: RING finger
            and CHY zinc finger domain-containing protein 1 isoform 1
            [Vitis vinifera] gi|297739980|emb|CBI30162.3| unnamed
            protein product [Vitis vinifera]
          Length = 289

 Score =  482 bits (1241), Expect = e-133
 Identities = 208/283 (73%), Positives = 242/283 (85%)
 Frame = -1

Query: 1494 SNLKTMEICNSYERDDNLIKEPRSENFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSM 1315
            S L+     + +E D++L+ E  S  FGC+HY+R+CKIRAPCCDEIFDCRHCHNEAKN++
Sbjct: 3    SGLEGQMSTHRHEEDESLM-EMGSGRFGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKNAL 61

Query: 1314 EVYPLDRHDLPRHEVNKVICSLCNTEQDVHQNCINCGVRMGKYFCGICNFFDDDVSKNQY 1135
            EV PL RHD+PRHE+ +VICSLC TEQDV QNCI+CGV MG+YFC  C FFDDDVSK  Y
Sbjct: 62   EVDPLTRHDVPRHEIKRVICSLCGTEQDVQQNCIHCGVCMGQYFCSKCKFFDDDVSKQIY 121

Query: 1134 HCIGCGICRTGGKENFFHCDRCGCCYASSLKNSHRCVERAMHHNCPVCFEYLFDSMKDIS 955
            HC  CGICRTGG+ENFFHCD+CGCCY+++LK+SH CVERAMHHNCPVCFEYLFD+  DI+
Sbjct: 122  HCNKCGICRTGGEENFFHCDKCGCCYSTALKDSHNCVERAMHHNCPVCFEYLFDTTTDIT 181

Query: 954  VLQCGHTIHLDCLKEMEMHFKFTCPVCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVW 775
            VL CGHTIHL+CLKEME HF+++CPVCS+S CDMS VWEKLDQE+  TPMP M++NKMVW
Sbjct: 182  VLHCGHTIHLECLKEMERHFQYSCPVCSKSYCDMSHVWEKLDQEVALTPMPSMFENKMVW 241

Query: 774  ILCNDCGTTSEVHFHIVAHKCLSCNSYNTRQTRGSVASCSSTL 646
            ILCNDCG TSEV+FHIVAHKCL CNSYNTRQTRG  ASCSS +
Sbjct: 242  ILCNDCGETSEVNFHIVAHKCLKCNSYNTRQTRGGPASCSSRI 284


>ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|222850712|gb|EEE88259.1|
            predicted protein [Populus trichocarpa]
          Length = 291

 Score =  480 bits (1235), Expect = e-133
 Identities = 202/264 (76%), Positives = 235/264 (89%), Gaps = 1/264 (0%)
 Frame = -1

Query: 1440 IKEPRSENFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSMEVYPLDRHDLPRHEVNKV 1261
            + E  S N+GC+HY+R+CKIRAPCC+EIFDCRHCHN+AKN +E  PLDRHD+PRHEV KV
Sbjct: 21   LMEIGSGNYGCSHYRRRCKIRAPCCNEIFDCRHCHNDAKNGLETNPLDRHDIPRHEVTKV 80

Query: 1260 ICSLCNTEQDVHQNCINCGVRMGKYFCGICNFFDDDVSKNQYHCIGCGICRTGGKENFFH 1081
            ICSLC+TEQDV QNCINCGV MGKY+C  C FFDDDVSKNQYHC  CGICRTGGKENFFH
Sbjct: 81   ICSLCDTEQDVKQNCINCGVCMGKYYCSKCKFFDDDVSKNQYHCDECGICRTGGKENFFH 140

Query: 1080 CDRCGCCYASSLKNSHRCVERAMHHNCPVCFEYLFDSMKDISVLQCGHTIHLDCLKEMEM 901
            C++CGCCY+  +K++HRCVERAMHHNCPVCFE+LFD+M+DI+VL CGHTIHL+CLKEME 
Sbjct: 141  CNKCGCCYSMLMKDAHRCVERAMHHNCPVCFEFLFDTMRDITVLPCGHTIHLECLKEMEQ 200

Query: 900  HFKFTCPVCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVA 721
            H++++CPVCS+S+CDM+++W+KLDQEI +TPMPE YQNKMVWILCNDCG  S V FHIVA
Sbjct: 201  HYRYSCPVCSKSICDMTRLWKKLDQEIAATPMPETYQNKMVWILCNDCGANSHVQFHIVA 260

Query: 720  HKCLSCNSYNTRQTRGS-VASCSS 652
            HKCL CNSYNTRQTRG   ASCSS
Sbjct: 261  HKCLRCNSYNTRQTRGGPAASCSS 284


>ref|XP_002519457.1| zinc finger protein, putative [Ricinus communis]
            gi|223541320|gb|EEF42871.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 282

 Score =  471 bits (1211), Expect = e-130
 Identities = 200/258 (77%), Positives = 225/258 (87%)
 Frame = -1

Query: 1419 NFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSMEVYPLDRHDLPRHEVNKVICSLCNT 1240
            +FGC+HY+R+CKIRAPCCDEIFDCRHCHNE+KNS+EV PLDRHD+PRHE+ +VICSLC  
Sbjct: 22   DFGCSHYRRRCKIRAPCCDEIFDCRHCHNESKNSVEVNPLDRHDVPRHELKRVICSLCGK 81

Query: 1239 EQDVHQNCINCGVRMGKYFCGICNFFDDDVSKNQYHCIGCGICRTGGKENFFHCDRCGCC 1060
            EQDV Q+CI CGV MGKYFC  C FFDDD SK QYHC  CGICRTGGKENFFHC RCGCC
Sbjct: 82   EQDVQQHCIQCGVCMGKYFCSKCKFFDDDDSKQQYHCDECGICRTGGKENFFHCSRCGCC 141

Query: 1059 YASSLKNSHRCVERAMHHNCPVCFEYLFDSMKDISVLQCGHTIHLDCLKEMEMHFKFTCP 880
            Y+  LK+SH CVERAMHHNCPVCFEYLFD+ +DI+VL CGHTIHL+C+KEME HF++ CP
Sbjct: 142  YSKLLKDSHNCVERAMHHNCPVCFEYLFDTTRDITVLPCGHTIHLECVKEMERHFQYACP 201

Query: 879  VCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKCLSCN 700
            VCSRS CDMS VWEKLD+E+ STPMP++YQNKMVWILCNDCG TSEV FHIVA KC+ CN
Sbjct: 202  VCSRSYCDMSCVWEKLDREVASTPMPQIYQNKMVWILCNDCGETSEVIFHIVARKCIKCN 261

Query: 699  SYNTRQTRGSVASCSSTL 646
            SYNTRQTRG   SCSS +
Sbjct: 262  SYNTRQTRGGPTSCSSRI 279


>gb|AFK44622.1| unknown [Lotus japonicus]
          Length = 299

 Score =  468 bits (1205), Expect = e-129
 Identities = 195/258 (75%), Positives = 224/258 (86%), Gaps = 1/258 (0%)
 Frame = -1

Query: 1422 ENFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSMEVYPLDRHDLPRHEVNKVICSLCN 1243
            E+FGC HY+RKC+IRAPCCDE+FDCRHCHNEAKNS E+ PLDRHD+PRHE+ KVICSLC+
Sbjct: 35   EDFGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVICSLCD 94

Query: 1242 TEQDVHQNCINCGVRMGKYFCGICNFFDDDVSKNQYHCIGCGICRTGGKENFFHCDRCGC 1063
            TEQDV Q CINCGV MGKYFC  C FFDDD+SKNQYHC  CGICR GGK+NFFHC RCGC
Sbjct: 95   TEQDVQQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRIGGKDNFFHCKRCGC 154

Query: 1062 CYASSLKNSHRCVERAMHHNCPVCFEYLFDSMKDISVLQCGHTIHLDCLKEMEMHFKFTC 883
            CY   ++  H CVE+AMHHNCPVCFEYLFD++KDI+VL CGHTIHL+C+KEME H +FTC
Sbjct: 155  CYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKHHRFTC 214

Query: 882  PVCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKCLSC 703
            PVCS+S+CDMS +W+KLDQ + STPMPE Y+NKM+WILCNDCG  S V FHIVAHKCLSC
Sbjct: 215  PVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVNSNVQFHIVAHKCLSC 274

Query: 702  NSYNTRQTRGSVA-SCSS 652
            NSYNTRQ +G+ + SCSS
Sbjct: 275  NSYNTRQIQGTPSTSCSS 292


>ref|XP_002274709.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein
            1 [Vitis vinifera] gi|297734901|emb|CBI17135.3| unnamed
            protein product [Vitis vinifera]
          Length = 289

 Score =  467 bits (1201), Expect = e-129
 Identities = 202/279 (72%), Positives = 235/279 (84%), Gaps = 1/279 (0%)
 Frame = -1

Query: 1485 KTMEICNSYERDDNLIKEPRSENFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSMEVY 1306
            K +EIC      +  + E  S  +GC HY+R+CKIRAPCCDEIFDCRHCHNEAKN +E  
Sbjct: 8    KLLEICGR----EVSLTELGSGKYGCTHYRRRCKIRAPCCDEIFDCRHCHNEAKNLLETD 63

Query: 1305 PLDRHDLPRHEVNKVICSLCNTEQDVHQNCINCGVRMGKYFCGICNFFDDDVSKNQYHCI 1126
            P DRHD+PRHEV KVICSLC+TEQDV QNCI CGV MG+YFC  C FFDDDVSKNQYHC 
Sbjct: 64   PHDRHDIPRHEVKKVICSLCDTEQDVQQNCIACGVCMGEYFCEKCKFFDDDVSKNQYHCE 123

Query: 1125 GCGICRTGGKENFFHCDRCGCCYASSLKNSHRCVERAMHHNCPVCFEYLFDSMKDISVLQ 946
             CGICRTGGKENFFHC++CGCCY++ +K++HRCVERAMHHNCPVCFE+LFD+ KDI+VLQ
Sbjct: 124  ECGICRTGGKENFFHCNKCGCCYSNMMKDTHRCVERAMHHNCPVCFEFLFDTTKDITVLQ 183

Query: 945  CGHTIHLDCLKEMEMHFKFTCPVCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILC 766
            CGHTIH +C+KEM+ HF ++CPVCS+S+CDMS +WEK+D+E+ STPMPEMY+ KMVWILC
Sbjct: 184  CGHTIHWECVKEMQQHFCYSCPVCSKSICDMSSLWEKIDREVASTPMPEMYRKKMVWILC 243

Query: 765  NDCGTTSEVHFHIVAHKCLSCNSYNTRQTRGSVA-SCSS 652
            NDCG  SEV FHIVAHKCLSC SYNTRQ +G  A SCSS
Sbjct: 244  NDCGAQSEVQFHIVAHKCLSCKSYNTRQIQGGPASSCSS 282


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