BLASTX nr result
ID: Coptis21_contig00001292
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00001292
(5447 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2383 0.0
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 2344 0.0
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2344 0.0
ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S... 2326 0.0
gb|AFW57310.1| RNA polymerase II large subunit family protein [Z... 2321 0.0
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
vinifera]
Length = 1848
Score = 2383 bits (6177), Expect = 0.0
Identities = 1189/1309 (90%), Positives = 1233/1309 (94%)
Frame = +3
Query: 3 VFLGLDPKYARPDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQ 182
+ LGL+PKYARPDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQ
Sbjct: 230 ILLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQ 289
Query: 183 ERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGN 362
ERNGAPAHIISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGN
Sbjct: 290 ERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGN 349
Query: 363 LMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPP 542
LMGKRVDFSARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPP
Sbjct: 350 LMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP 409
Query: 543 PGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLIDGDYVLFNRQPSLHKMSIM 722
PGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIM
Sbjct: 410 PGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIM 469
Query: 723 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQA 902
GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+
Sbjct: 470 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQS 529
Query: 903 NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKXXXXXXXXXXXXWTGKQ 1082
NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK WTGKQ
Sbjct: 530 NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQ 589
Query: 1083 VFNLIIPKQINLMRTSAWHSEAETGFITPGDTQVRIERXXXXXXXXXXXXXXXXXXSLIH 1262
VFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+ SLIH
Sbjct: 590 VFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIH 649
Query: 1263 VIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAETMEKINKTISDAKDEVK 1442
VIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA TMEKIN+TIS AK+EVK
Sbjct: 650 VIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVK 709
Query: 1443 DLIKHAHEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGS 1622
+LI+ A E+QLE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGS
Sbjct: 710 ELIRAAQERQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGS 769
Query: 1623 KGSFINISQMTACVGQQNVEGKRIPYGFLDRTLPHFTKDDNGPESRGFVENSYLRGLTPQ 1802
KGSFINISQMTACVGQQNVEGKRIPYGF+DRTLPHFTKDD GPESRGFVENSYLRGLTPQ
Sbjct: 770 KGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQ 829
Query: 1803 EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 1982
EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED
Sbjct: 830 EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 889
Query: 1983 GMDSVWIESQKLDSLKMKQSEFDEVFRYELDTENWLPKYMLPEHVEDMKTIREFRSVFDA 2162
GMD+VWIE+QKLDSLKMK+ EFD VF+YE+D ENW P YMLPEHVED+KTIREFR+VFDA
Sbjct: 890 GMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDA 949
Query: 2163 EAEKLRVDRLQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRKASDMHPMEIVEAV 2342
E +KL DR QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLR+ SDMHPMEIVEAV
Sbjct: 950 EVQKLEADRFQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAV 1009
Query: 2343 DKLQERLKVVPGDDFLSLEAQKNATLFFNILLRSTFASKRVLREYRLSKEAFDWVIGEIE 2522
DKLQERLKVVPGDD +S+EAQKNATLFFNILLRSTFASKRVL+EYRL++EAF+WVIGEIE
Sbjct: 1010 DKLQERLKVVPGDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIE 1069
Query: 2523 TRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK 2702
+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK
Sbjct: 1070 SRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK 1129
Query: 2703 IKTPSLSVYLKPEVNKTKEAAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFV 2882
IKTPSLSVYLKP+V+KTKE AK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFV
Sbjct: 1130 IKTPSLSVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFV 1189
Query: 2883 RSYYEMPDEEVDPEKISPWLLRIELNREMMVDKKLNMMDIAGKINHEFDDDLTCIFNDDN 3062
+SYYEMPDEEV PEKISPWLLRIELNREMMVDKKL+M DIA KIN EFDDDLTCIFNDDN
Sbjct: 1190 KSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDN 1249
Query: 3063 AEKLILRIRIMNDEAPKGEMQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKV 3242
AEKLILRIRIMNDEAPKGE+QDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKV
Sbjct: 1250 AEKLILRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKV 1309
Query: 3243 NRFDEAEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLL 3422
N+FDE+EGFKPE+EWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVRRSLL
Sbjct: 1310 NKFDESEGFKPEVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLL 1369
Query: 3423 DELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDIL 3602
DELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDIL
Sbjct: 1370 DELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDIL 1429
Query: 3603 LDAAVYAETDHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELHLPSYMDGGGLDF 3782
LDAAVYAETD LRGVTENIMLGQLAPIGTGDCALYLNDQMLQ AIEL LPSYM+ GLDF
Sbjct: 1430 LDAAVYAETDFLRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYME--GLDF 1487
Query: 3783 GVTPSRSPITGTPYHDGMMSPNYALSPNIRSSPFNSDAIFSPYVGGMAF 3929
G+TPSRSPITGTPYHDGMMSPNY LSPN+R SP +DA FSPYVGGMAF
Sbjct: 1488 GMTPSRSPITGTPYHDGMMSPNYLLSPNLRLSPI-TDAQFSPYVGGMAF 1535
Score = 87.0 bits (214), Expect = 5e-14
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +3
Query: 4665 GASPDYSPSTPQYSPSAGYSPTAPGYSPSSTSQYTPQLSTKDEGT 4799
G SPDYSPS+PQYSPSAGYSP+APGYSPSSTSQYTPQ+S KD G+
Sbjct: 1802 GVSPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPQMSNKDNGS 1846
>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
sativus]
Length = 1853
Score = 2344 bits (6074), Expect = 0.0
Identities = 1170/1307 (89%), Positives = 1221/1307 (93%)
Frame = +3
Query: 9 LGLDPKYARPDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 188
LGL+PKYARPDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 232 LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 291
Query: 189 NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 368
NG+PAHIISEFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 292 NGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLM 351
Query: 369 GKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPG 548
GKRVDFSARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPG
Sbjct: 352 GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 411
Query: 549 KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLIDGDYVLFNRQPSLHKMSIMGH 728
KTGAKYIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGH
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 471
Query: 729 RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR 908
RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NR
Sbjct: 472 RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 531
Query: 909 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKXXXXXXXXXXXXWTGKQVF 1088
PVMGIVQDTLLGCRKITKRDTFI KDVFMN LMWWEDFDGK WTGKQVF
Sbjct: 532 PVMGIVQDTLLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVF 591
Query: 1089 NLIIPKQINLMRTSAWHSEAETGFITPGDTQVRIERXXXXXXXXXXXXXXXXXXSLIHVI 1268
NLIIPKQINL RTSAWHSE+ETG ITPGDT VRIE+ SLIHVI
Sbjct: 592 NLIIPKQINLTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVI 651
Query: 1269 WEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAETMEKINKTISDAKDEVKDL 1448
WEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA TMEKIN+TIS AK+EVK+L
Sbjct: 652 WEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNL 711
Query: 1449 IKHAHEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKG 1628
IK A E+ LEPEPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKG
Sbjct: 712 IKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKG 771
Query: 1629 SFINISQMTACVGQQNVEGKRIPYGFLDRTLPHFTKDDNGPESRGFVENSYLRGLTPQEF 1808
SFINISQMTACVGQQNVEGKRIP+GF+DRTLPHFTKDD GPESRGFVENSYLRGLTPQEF
Sbjct: 772 SFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEF 831
Query: 1809 FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM 1988
FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM
Sbjct: 832 FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM 891
Query: 1989 DSVWIESQKLDSLKMKQSEFDEVFRYELDTENWLPKYMLPEHVEDMKTIREFRSVFDAEA 2168
D+VWIESQKLDSLKMK+ EF+ +FRYE + ENW P YMLPEHVED+KTIREFR+VF+AE
Sbjct: 892 DAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEV 951
Query: 2169 EKLRVDRLQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRKASDMHPMEIVEAVDK 2348
+KL DR QLGTEIATTG+NSWPMPVNLKRLI NAQKTFK+D R+ASDMHPMEIVEA+DK
Sbjct: 952 QKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDK 1011
Query: 2349 LQERLKVVPGDDFLSLEAQKNATLFFNILLRSTFASKRVLREYRLSKEAFDWVIGEIETR 2528
LQERLKVVPG+D LS+EAQKNATLFFNILLRSTFASKRVL EYRL++EAF+WVIGEIE+R
Sbjct: 1012 LQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESR 1071
Query: 2529 FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIK 2708
FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IK
Sbjct: 1072 FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIK 1131
Query: 2709 TPSLSVYLKPEVNKTKEAAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVRS 2888
TPSLSVYLKPE NKTKE AK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFV+S
Sbjct: 1132 TPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKS 1191
Query: 2889 YYEMPDEEVDPEKISPWLLRIELNREMMVDKKLNMMDIAGKINHEFDDDLTCIFNDDNAE 3068
YYEMPDEE+ PEKISPWLLRIELNREMMVDKKL+M +IA KIN EFDDDLTCIFNDDNAE
Sbjct: 1192 YYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAE 1251
Query: 3069 KLILRIRIMNDEAPKGEMQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNR 3248
KLILRIRIMNDEAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVN+
Sbjct: 1252 KLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNK 1311
Query: 3249 FDEAEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDE 3428
FDE EGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDE
Sbjct: 1312 FDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDE 1371
Query: 3429 LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD 3608
LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD
Sbjct: 1372 LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD 1431
Query: 3609 AAVYAETDHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELHLPSYMDGGGLDFGV 3788
AAVYAETDHLRGVTENIMLGQLAPIGTG CALYLND+ML+ AIEL LPSY+D GLDFG+
Sbjct: 1432 AAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID--GLDFGM 1489
Query: 3789 TPSRSPITGTPYHDGMMSPNYALSPNIRSSPFNSDAIFSPYVGGMAF 3929
TPSRSPI+GTPYH+GMMSPNY LSPN+R SP SDA FSPYVGGMAF
Sbjct: 1490 TPSRSPISGTPYHEGMMSPNYLLSPNLRLSPI-SDAQFSPYVGGMAF 1535
Score = 87.8 bits (216), Expect = 3e-14
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +3
Query: 4665 GASPDYSPSTPQYSPSAGYSPTAPGYSPSSTSQYTPQLSTKDEGTKRSKKD 4817
G SPDYSPS+PQYSPSAGYSPTAPGYSPSSTSQYTPQ S KD+ RS+KD
Sbjct: 1802 GPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDD---RSRKD 1849
>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1-like [Cucumis sativus]
Length = 1832
Score = 2344 bits (6074), Expect = 0.0
Identities = 1170/1307 (89%), Positives = 1221/1307 (93%)
Frame = +3
Query: 9 LGLDPKYARPDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 188
LGL+PKYARPDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 232 LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 291
Query: 189 NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 368
NG+PAHIISEFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 292 NGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLM 351
Query: 369 GKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPG 548
GKRVDFSARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPG
Sbjct: 352 GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 411
Query: 549 KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLIDGDYVLFNRQPSLHKMSIMGH 728
KTGAKYIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGH
Sbjct: 412 KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 471
Query: 729 RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR 908
RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NR
Sbjct: 472 RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 531
Query: 909 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKXXXXXXXXXXXXWTGKQVF 1088
PVMGIVQDTLLGCRKITKRDTFI KDVFMN LMWWEDFDGK WTGKQVF
Sbjct: 532 PVMGIVQDTLLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVF 591
Query: 1089 NLIIPKQINLMRTSAWHSEAETGFITPGDTQVRIERXXXXXXXXXXXXXXXXXXSLIHVI 1268
NLIIPKQINL RTSAWHSE+ETG ITPGDT VRIE+ SLIHVI
Sbjct: 592 NLIIPKQINLTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVI 651
Query: 1269 WEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAETMEKINKTISDAKDEVKDL 1448
WEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA TMEKIN+TIS AK+EVK+L
Sbjct: 652 WEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNL 711
Query: 1449 IKHAHEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKG 1628
IK A E+ LEPEPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKG
Sbjct: 712 IKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKG 771
Query: 1629 SFINISQMTACVGQQNVEGKRIPYGFLDRTLPHFTKDDNGPESRGFVENSYLRGLTPQEF 1808
SFINISQMTACVGQQNVEGKRIP+GF+DRTLPHFTKDD GPESRGFVENSYLRGLTPQEF
Sbjct: 772 SFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEF 831
Query: 1809 FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM 1988
FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM
Sbjct: 832 FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM 891
Query: 1989 DSVWIESQKLDSLKMKQSEFDEVFRYELDTENWLPKYMLPEHVEDMKTIREFRSVFDAEA 2168
D+VWIESQKLDSLKMK+ EF+ +FRYE + ENW P YMLPEHVED+KTIREFR+VF+AE
Sbjct: 892 DAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEV 951
Query: 2169 EKLRVDRLQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRKASDMHPMEIVEAVDK 2348
+KL DR QLGTEIATTG+NSWPMPVNLKRLI NAQKTFK+D R+ASDMHPMEIVEA+DK
Sbjct: 952 QKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDK 1011
Query: 2349 LQERLKVVPGDDFLSLEAQKNATLFFNILLRSTFASKRVLREYRLSKEAFDWVIGEIETR 2528
LQERLKVVPG+D LS+EAQKNATLFFNILLRSTFASKRVL EYRL++EAF+WVIGEIE+R
Sbjct: 1012 LQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESR 1071
Query: 2529 FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIK 2708
FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IK
Sbjct: 1072 FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIK 1131
Query: 2709 TPSLSVYLKPEVNKTKEAAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVRS 2888
TPSLSVYLKPE NKTKE AK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFV+S
Sbjct: 1132 TPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKS 1191
Query: 2889 YYEMPDEEVDPEKISPWLLRIELNREMMVDKKLNMMDIAGKINHEFDDDLTCIFNDDNAE 3068
YYEMPDEE+ PEKISPWLLRIELNREMMVDKKL+M +IA KIN EFDDDLTCIFNDDNAE
Sbjct: 1192 YYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAE 1251
Query: 3069 KLILRIRIMNDEAPKGEMQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNR 3248
KLILRIRIMNDEAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVN+
Sbjct: 1252 KLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNK 1311
Query: 3249 FDEAEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDE 3428
FDE EGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDE
Sbjct: 1312 FDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDE 1371
Query: 3429 LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD 3608
LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD
Sbjct: 1372 LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD 1431
Query: 3609 AAVYAETDHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELHLPSYMDGGGLDFGV 3788
AAVYAETDHLRGVTENIMLGQLAPIGTG CALYLND+ML+ AIEL LPSY+D GLDFG+
Sbjct: 1432 AAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID--GLDFGM 1489
Query: 3789 TPSRSPITGTPYHDGMMSPNYALSPNIRSSPFNSDAIFSPYVGGMAF 3929
TPSRSPI+GTPYH+GMMSPNY LSPN+R SP SDA FSPYVGGMAF
Sbjct: 1490 TPSRSPISGTPYHEGMMSPNYLLSPNLRLSPI-SDAQFSPYVGGMAF 1535
Score = 87.8 bits (216), Expect = 3e-14
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +3
Query: 4665 GASPDYSPSTPQYSPSAGYSPTAPGYSPSSTSQYTPQLSTKDEGTKRSKKD 4817
G SPDYSPS+PQYSPSAGYSPTAPGYSPSSTSQYTPQ S KD+ RS+KD
Sbjct: 1781 GPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDD---RSRKD 1828
>ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
gi|241940227|gb|EES13372.1| hypothetical protein
SORBIDRAFT_07g003680 [Sorghum bicolor]
Length = 1857
Score = 2326 bits (6029), Expect = 0.0
Identities = 1155/1309 (88%), Positives = 1212/1309 (92%)
Frame = +3
Query: 3 VFLGLDPKYARPDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQ 182
+ LGL+PKYARPDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQ
Sbjct: 229 LLLGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQ 288
Query: 183 ERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGN 362
ERNGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGN
Sbjct: 289 ERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGN 348
Query: 363 LMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPP 542
LMGKRVDFSARTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPP
Sbjct: 349 LMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP 408
Query: 543 PGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLIDGDYVLFNRQPSLHKMSIM 722
PGKTGAKYIIREDGQRLDLRY+KKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIM
Sbjct: 409 PGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIM 468
Query: 723 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQA 902
GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+
Sbjct: 469 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQS 528
Query: 903 NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKXXXXXXXXXXXXWTGKQ 1082
NRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMWW+DFDGK WTGKQ
Sbjct: 529 NRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPAILKPRPIWTGKQ 588
Query: 1083 VFNLIIPKQINLMRTSAWHSEAETGFITPGDTQVRIERXXXXXXXXXXXXXXXXXXSLIH 1262
VFNLIIPKQINL+R SAWHSE E GFITPGDT VRIE+ SLIH
Sbjct: 589 VFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGTGSLIH 648
Query: 1263 VIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAETMEKINKTISDAKDEVK 1442
+IWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA TM+ IN TI AKDEVK
Sbjct: 649 IIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMQTINDTICKAKDEVK 708
Query: 1443 DLIKHAHEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGS 1622
+LIK AHEKQLE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGS
Sbjct: 709 ELIKKAHEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGS 768
Query: 1623 KGSFINISQMTACVGQQNVEGKRIPYGFLDRTLPHFTKDDNGPESRGFVENSYLRGLTPQ 1802
KGSFINISQMTACVGQQNVEGKRIP+GF+DRTLPHFTKDD GPESRGFVENSYLRGLTPQ
Sbjct: 769 KGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQ 828
Query: 1803 EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 1982
EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED
Sbjct: 829 EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 888
Query: 1983 GMDSVWIESQKLDSLKMKQSEFDEVFRYELDTENWLPKYMLPEHVEDMKTIREFRSVFDA 2162
GMD+VWIESQKLDSLKMK+ EFD +FRYELD ENW P YMLPEHV+D+KTIREFR+VF+A
Sbjct: 889 GMDAVWIESQKLDSLKMKKPEFDNLFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEA 948
Query: 2163 EAEKLRVDRLQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRKASDMHPMEIVEAV 2342
E +KL DR QLGTEIATTGDNSWPMPVNLKRLIWNAQKTF++D R+ SDMHPMEIVEAV
Sbjct: 949 EVQKLEADRYQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFRIDFRRPSDMHPMEIVEAV 1008
Query: 2343 DKLQERLKVVPGDDFLSLEAQKNATLFFNILLRSTFASKRVLREYRLSKEAFDWVIGEIE 2522
DKLQERLKVVPGDD +S+EAQKNATLFFNILLRSTFASKRVL+EYRL+KEAF+WVIGEIE
Sbjct: 1009 DKLQERLKVVPGDDPMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIE 1068
Query: 2523 TRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK 2702
+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK
Sbjct: 1069 SRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK 1128
Query: 2703 IKTPSLSVYLKPEVNKTKEAAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFV 2882
IKTPSLSVYLKPEVN+ KE AK+VQCALEYTTLRSVT ATE+WYDPDP+ TIIEED +FV
Sbjct: 1129 IKTPSLSVYLKPEVNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFV 1188
Query: 2883 RSYYEMPDEEVDPEKISPWLLRIELNREMMVDKKLNMMDIAGKINHEFDDDLTCIFNDDN 3062
+SYYEMPDE++DP+KISPWLLRIELNREMMVDKKL+M DIA KIN EFDDDL+CIFNDDN
Sbjct: 1189 QSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIADKINREFDDDLSCIFNDDN 1248
Query: 3063 AEKLILRIRIMNDEAPKGEMQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKV 3242
A+KLILRIRI NDEAPKGE+QDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK GKV
Sbjct: 1249 ADKLILRIRITNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEGKV 1308
Query: 3243 NRFDEAEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLL 3422
N F + EGFK EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVRRSLL
Sbjct: 1309 NTFYQDEGFKAANEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLL 1368
Query: 3423 DELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDIL 3602
DELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDIL
Sbjct: 1369 DELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDIL 1428
Query: 3603 LDAAVYAETDHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELHLPSYMDGGGLDF 3782
LDAAVYAE+DHLRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIEL LPSY++ GLDF
Sbjct: 1429 LDAAVYAESDHLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVE--GLDF 1486
Query: 3783 GVTPSRSPITGTPYHDGMMSPNYALSPNIRSSPFNSDAIFSPYVGGMAF 3929
G+TP+RSPI+GTPYH+GMMSP+Y LSPNIR+SP N+DA FSPYVG MAF
Sbjct: 1487 GMTPARSPISGTPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1535
Score = 61.2 bits (147), Expect = 3e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 4665 GASPDYSPSTPQYSPSAGYSPTAPGYSPSSTSQ 4763
G SPDYSP++P YSPS YSPTAPGYSPSST Q
Sbjct: 1815 GPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTGQ 1847
>gb|AFW57310.1| RNA polymerase II large subunit family protein [Zea mays]
Length = 1850
Score = 2321 bits (6015), Expect = 0.0
Identities = 1152/1309 (88%), Positives = 1210/1309 (92%)
Frame = +3
Query: 3 VFLGLDPKYARPDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQ 182
+ LGL+PKYARPDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQ
Sbjct: 229 LLLGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQ 288
Query: 183 ERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGN 362
ERNGAPAHII+EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGN
Sbjct: 289 ERNGAPAHIITEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGN 348
Query: 363 LMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPP 542
LMGKRVDFSARTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPP
Sbjct: 349 LMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP 408
Query: 543 PGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLIDGDYVLFNRQPSLHKMSIM 722
PGKTGAKYIIREDGQRLDLRY+KKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIM
Sbjct: 409 PGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIM 468
Query: 723 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQA 902
GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+
Sbjct: 469 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQS 528
Query: 903 NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKXXXXXXXXXXXXWTGKQ 1082
NRPVMGIVQDTLLGCRKITKRDT IEKDVFMNILMWW+DFDGK WTGKQ
Sbjct: 529 NRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPTILKPRPIWTGKQ 588
Query: 1083 VFNLIIPKQINLMRTSAWHSEAETGFITPGDTQVRIERXXXXXXXXXXXXXXXXXXSLIH 1262
VFNLIIPKQINL+R SAWHSE E GFITPGDT VRIE+ SLIH
Sbjct: 589 VFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIH 648
Query: 1263 VIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAETMEKINKTISDAKDEVK 1442
VIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA TME IN TIS AK+ VK
Sbjct: 649 VIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMETINDTISKAKNAVK 708
Query: 1443 DLIKHAHEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGS 1622
+LIK AHEKQLE EPGRTMMESFENRVNQVLNKARDDAGSSAQ SLSESNNLKAMVTAGS
Sbjct: 709 ELIKKAHEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQNSLSESNNLKAMVTAGS 768
Query: 1623 KGSFINISQMTACVGQQNVEGKRIPYGFLDRTLPHFTKDDNGPESRGFVENSYLRGLTPQ 1802
KGSFINISQMTACVGQQNVEGKRIP+GF+DRTLPHFTKDD GPESRGFVENSYLRGLTPQ
Sbjct: 769 KGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQ 828
Query: 1803 EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 1982
EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED
Sbjct: 829 EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 888
Query: 1983 GMDSVWIESQKLDSLKMKQSEFDEVFRYELDTENWLPKYMLPEHVEDMKTIREFRSVFDA 2162
GMD+VWIESQKLDSLKMK+ EFD VFRYELD ENW P YMLPEHV+D+KTIREFR+VF+A
Sbjct: 889 GMDAVWIESQKLDSLKMKKPEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEA 948
Query: 2163 EAEKLRVDRLQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRKASDMHPMEIVEAV 2342
E +KL DR QLG+EI TTGDNSWPMPVNLKRLIWNAQKTFK+D R+ SDMHPMEIVEA+
Sbjct: 949 EVQKLEADRYQLGSEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAI 1008
Query: 2343 DKLQERLKVVPGDDFLSLEAQKNATLFFNILLRSTFASKRVLREYRLSKEAFDWVIGEIE 2522
DKLQERLKVVPGDD +S+EAQKNATLFFNILLRSTFASKRVL+EYRL+KEAF+WVIGEIE
Sbjct: 1009 DKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIE 1068
Query: 2523 TRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK 2702
+RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK
Sbjct: 1069 SRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK 1128
Query: 2703 IKTPSLSVYLKPEVNKTKEAAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFV 2882
IKTPSLSVYLKP+VN+ KE AK+VQCALEYTTLRSVT ATE+WYDPDP+ TIIEED +FV
Sbjct: 1129 IKTPSLSVYLKPQVNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDTEFV 1188
Query: 2883 RSYYEMPDEEVDPEKISPWLLRIELNREMMVDKKLNMMDIAGKINHEFDDDLTCIFNDDN 3062
+SYYEMPDE++DP+KISPWLLRIELNREMMVDKKL+M DIA KIN EFDDDL+CIFNDDN
Sbjct: 1189 QSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINREFDDDLSCIFNDDN 1248
Query: 3063 AEKLILRIRIMNDEAPKGEMQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKV 3242
A+KLILRIRI NDEAPKGE+QDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK GKV
Sbjct: 1249 ADKLILRIRITNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEGKV 1308
Query: 3243 NRFDEAEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLL 3422
N F + +GFK EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVRRSLL
Sbjct: 1309 NTFYQDDGFKAANEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLL 1368
Query: 3423 DELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDIL 3602
DELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDIL
Sbjct: 1369 DELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDIL 1428
Query: 3603 LDAAVYAETDHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELHLPSYMDGGGLDF 3782
LDAAVYAE+DHLRGVTENIMLGQLAPIGTG CALYLNDQMLQQAIEL LPSY++ GLDF
Sbjct: 1429 LDAAVYAESDHLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVE--GLDF 1486
Query: 3783 GVTPSRSPITGTPYHDGMMSPNYALSPNIRSSPFNSDAIFSPYVGGMAF 3929
G+TP+RSPITGTPYH+GMMSP+Y LSPNIR+SP N+DA FSPYVG MAF
Sbjct: 1487 GMTPARSPITGTPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1535
Score = 61.2 bits (147), Expect = 3e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 4665 GASPDYSPSTPQYSPSAGYSPTAPGYSPSSTSQ 4763
G SPDYSP++P YSPS YSPTAPGYSPSST Q
Sbjct: 1808 GPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTGQ 1840