BLASTX nr result
ID: Coptis21_contig00001267
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00001267 (1009 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004145491.1| PREDICTED: ER membrane protein complex subun... 283 6e-74 ref|XP_002515399.1| conserved hypothetical protein [Ricinus comm... 283 6e-74 ref|XP_004164576.1| PREDICTED: ER membrane protein complex subun... 281 1e-73 ref|XP_002285573.1| PREDICTED: transmembrane protein 85 [Vitis v... 281 2e-73 ref|XP_002309687.1| predicted protein [Populus trichocarpa] gi|2... 278 2e-72 >ref|XP_004145491.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis sativus] Length = 180 Score = 283 bits (723), Expect = 6e-74 Identities = 138/179 (77%), Positives = 155/179 (86%), Gaps = 3/179 (1%) Frame = +1 Query: 40 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 210 MEKGKG+M+ RRWAV+ +D SS S +DIPDPPG+T+ASQDQDDST+SRQKKDAE+ WK Sbjct: 1 MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60 Query: 211 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 390 +QKAWEVAQAP+KNLFMMGFMMWMAG+TVHLFSIGITFSALWQP+SALQG+GKVFEPYKD Sbjct: 61 AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120 Query: 391 PKVDNLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 567 KVD L PKL+F GVWKLN+LGLLPTH SDWVSSLPPA+EVEFSGGG L Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISL 179 >ref|XP_002515399.1| conserved hypothetical protein [Ricinus communis] gi|223545343|gb|EEF46848.1| conserved hypothetical protein [Ricinus communis] Length = 180 Score = 283 bits (723), Expect = 6e-74 Identities = 137/179 (76%), Positives = 154/179 (86%), Gaps = 3/179 (1%) Frame = +1 Query: 40 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 210 MEKGKGVM RRWA++ TD S+L S +D+PDPPG+++ASQDQDDSTV++QKKDAEA WK Sbjct: 1 MEKGKGVMGSGRRWAIDFTDNSNLPSSRDVPDPPGFSRASQDQDDSTVTKQKKDAEANWK 60 Query: 211 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 390 +QKAWEVAQAP KNL MMGFMMWMAGNTVHLFSIGITFSALWQP+SALQG+GKVFEPYKD Sbjct: 61 AQKAWEVAQAPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120 Query: 391 PKVDNLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 567 +VD PKL+F G+WKLNSLGLLPTHASDWVSSLPPA+EVEFSGGG PL Sbjct: 121 SRVDLNGPKLLFIALNLGGLALGIWKLNSLGLLPTHASDWVSSLPPAQEVEFSGGGIPL 179 >ref|XP_004164576.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis sativus] Length = 180 Score = 281 bits (720), Expect = 1e-73 Identities = 137/179 (76%), Positives = 155/179 (86%), Gaps = 3/179 (1%) Frame = +1 Query: 40 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 210 MEKGKG+M+ RRWAV+ +D SS S +DIPDPPG+T+ASQDQDDST+SRQKKDAE+ WK Sbjct: 1 MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60 Query: 211 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 390 +QKAWEVAQAP+KNLFMMGFMMWMAG+TVHLFSIGITFSALWQP+SALQG+GKVFEPY+D Sbjct: 61 AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYRD 120 Query: 391 PKVDNLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 567 KVD L PKL+F GVWKLN+LGLLPTH SDWVSSLPPA+EVEFSGGG L Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISL 179 >ref|XP_002285573.1| PREDICTED: transmembrane protein 85 [Vitis vinifera] gi|147864285|emb|CAN83012.1| hypothetical protein VITISV_010104 [Vitis vinifera] gi|296082155|emb|CBI21160.3| unnamed protein product [Vitis vinifera] Length = 179 Score = 281 bits (719), Expect = 2e-73 Identities = 139/178 (78%), Positives = 154/178 (86%), Gaps = 2/178 (1%) Frame = +1 Query: 40 MEKGKGVML-RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWKS 213 MEKGKGVM RRWAV+LTD S+ S +DIPDPPG+++AS DQDDST+SRQKKDAEA WK+ Sbjct: 1 MEKGKGVMGGRRWAVDLTDYSTTPSSRDIPDPPGFSRASLDQDDSTLSRQKKDAEANWKA 60 Query: 214 QKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKDP 393 QKAWEVAQAP KNL MMGFMMWMAG+TVHLFSIGITFSALWQP+SALQG+GKVFEPYKD Sbjct: 61 QKAWEVAQAPFKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 120 Query: 394 KVDNLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 567 KVD L PKL+F GVWKLN+LGLLPTHASDWVSSLPPA+EVE+SGGG PL Sbjct: 121 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAQEVEYSGGGIPL 178 >ref|XP_002309687.1| predicted protein [Populus trichocarpa] gi|222855663|gb|EEE93210.1| predicted protein [Populus trichocarpa] Length = 180 Score = 278 bits (710), Expect = 2e-72 Identities = 135/179 (75%), Positives = 152/179 (84%), Gaps = 3/179 (1%) Frame = +1 Query: 40 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 210 M+KGK VM RRWAV+ TD S+L S +DIPDPPG+++ASQDQ+DS V++QKKDAEA WK Sbjct: 1 MDKGKAVMGSGRRWAVDFTDNSTLPSSRDIPDPPGFSRASQDQEDSAVTKQKKDAEANWK 60 Query: 211 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 390 +QKAWEVAQAP KNL MMGFMMWMAGNTVHLFSIGITFSALWQP+ ALQG+GKVFEPYKD Sbjct: 61 AQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPIGALQGVGKVFEPYKD 120 Query: 391 PKVDNLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 567 KVD L PKLVF G+WKLN+LGLLPTHASDWVSSLPPA+EVE+SGGG PL Sbjct: 121 SKVDLLVPKLVFIALNLGGLALGIWKLNTLGLLPTHASDWVSSLPPAKEVEYSGGGVPL 179