BLASTX nr result
ID: Coptis21_contig00001254
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00001254
(1885 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL278... 754 0.0
gb|AAP73451.1| actin [Gossypium hirsutum] 753 0.0
gb|AEK70332.1| actin [Paeonia lactiflora] gi|340784775|gb|AEK703... 753 0.0
gb|ADF31905.1| actin 2 [Pyrus x bretschneideri] gi|294718136|gb|... 753 0.0
ref|XP_002298710.1| actin 1 [Populus trichocarpa] gi|255562375|r... 753 0.0
>gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL27885.1| actin
[Helianthus annuus] gi|219563048|gb|ACL27886.1| actin
[Helianthus annuus] gi|306922316|dbj|BAJ17659.1| actin
[Gynura bicolor]
Length = 377
Score = 754 bits (1947), Expect = 0.0
Identities = 375/377 (99%), Positives = 377/377 (100%)
Frame = -1
Query: 1684 MADAEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 1505
MADAE+IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 1504 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 1325
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 1324 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 1145
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 1144 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 965
DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 240
Query: 964 SYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 785
+YELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 784 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 605
LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
Query: 604 KGEYDESGPSIVHRKCF 554
KGEYDESGPSIVHRKCF
Sbjct: 361 KGEYDESGPSIVHRKCF 377
>gb|AAP73451.1| actin [Gossypium hirsutum]
Length = 377
Score = 753 bits (1944), Expect = 0.0
Identities = 374/377 (99%), Positives = 377/377 (100%)
Frame = -1
Query: 1684 MADAEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 1505
MADAE+IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 1504 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 1325
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 1324 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 1145
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR+
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRV 180
Query: 1144 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 965
DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 240
Query: 964 SYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 785
+YELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 784 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 605
LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
Query: 604 KGEYDESGPSIVHRKCF 554
KGEYDESGPSIVHRKCF
Sbjct: 361 KGEYDESGPSIVHRKCF 377
>gb|AEK70332.1| actin [Paeonia lactiflora] gi|340784775|gb|AEK70337.1| actin [Paeonia
lactiflora] gi|402693643|gb|AFQ89888.1| actin [Paeonia
lactiflora]
Length = 377
Score = 753 bits (1944), Expect = 0.0
Identities = 374/377 (99%), Positives = 377/377 (100%)
Frame = -1
Query: 1684 MADAEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 1505
MADAE+IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 1504 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 1325
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 1324 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 1145
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 1144 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 965
DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELET+KSSSSVEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETSKSSSSVEK 240
Query: 964 SYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 785
+YELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 784 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 605
LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
Query: 604 KGEYDESGPSIVHRKCF 554
KGEYDESGPSIVHRKCF
Sbjct: 361 KGEYDESGPSIVHRKCF 377
>gb|ADF31905.1| actin 2 [Pyrus x bretschneideri] gi|294718136|gb|ADF31906.1| actin 2
[Pyrus x bretschneideri]
Length = 377
Score = 753 bits (1944), Expect = 0.0
Identities = 374/377 (99%), Positives = 377/377 (100%)
Frame = -1
Query: 1684 MADAEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 1505
MADAE+IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 1504 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 1325
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 1324 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 1145
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 1144 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 965
DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 240
Query: 964 SYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 785
+YELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 784 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 605
LSGGSTMFPGIADRMS+EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 301 LSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
Query: 604 KGEYDESGPSIVHRKCF 554
KGEYDESGPSIVHRKCF
Sbjct: 361 KGEYDESGPSIVHRKCF 377
>ref|XP_002298710.1| actin 1 [Populus trichocarpa] gi|255562375|ref|XP_002522194.1| actin,
putative [Ricinus communis]
gi|255568080|ref|XP_002525016.1| actin, putative [Ricinus
communis] gi|222845968|gb|EEE83515.1| actin 1 [Populus
trichocarpa] gi|223535678|gb|EEF37343.1| actin, putative
[Ricinus communis] gi|223538565|gb|EEF40169.1| actin,
putative [Ricinus communis] gi|315248859|gb|ADT91622.1|
actin7a [Hevea brasiliensis] gi|325053295|dbj|BAJ79029.1|
actin [Nitraria sibirica] gi|333463955|gb|AEF33711.1|
actin [Hevea brasiliensis] gi|358635038|dbj|BAL22349.1|
actin [Nitraria sibirica] gi|388252793|gb|AFK24460.1|
actin 2 [Ziziphus jujuba] gi|390988087|gb|AFM36693.1|
actin 1 [Ficus microcarpa] gi|452029751|gb|AGF91932.1|
actin [Euphorbia lathyris]
Length = 377
Score = 753 bits (1944), Expect = 0.0
Identities = 374/377 (99%), Positives = 377/377 (100%)
Frame = -1
Query: 1684 MADAEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 1505
MADAE+IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 1504 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 1325
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 1324 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 1145
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 1144 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 965
DLAGRDLTD+LMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK
Sbjct: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 240
Query: 964 SYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 785
+YELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 784 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 605
LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
Query: 604 KGEYDESGPSIVHRKCF 554
KGEYDESGPSIVHRKCF
Sbjct: 361 KGEYDESGPSIVHRKCF 377