BLASTX nr result

ID: Coptis21_contig00001245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001245
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143170.1| PREDICTED: mitoferrin-like [Cucumis sativus]...   457   e-126
ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|2...   455   e-125
ref|XP_003544903.1| PREDICTED: mitochondrial RNA-splicing protei...   452   e-125
ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis ...   451   e-124
ref|XP_003519270.1| PREDICTED: mitoferrin-like [Glycine max]          451   e-124

>ref|XP_004143170.1| PREDICTED: mitoferrin-like [Cucumis sativus]
            gi|449505169|ref|XP_004162396.1| PREDICTED:
            mitoferrin-like [Cucumis sativus]
          Length = 331

 Score =  457 bits (1177), Expect = e-126
 Identities = 225/323 (69%), Positives = 256/323 (79%), Gaps = 2/323 (0%)
 Frame = -2

Query: 1343 MATTDVSPAPKFQKPDFITMTQTPS--QETTVSAHDGLEFWQFMIAGSIAGCVEHMAMFP 1170
            MAT       KFQ PDF  +   P    E  VSAHDGL FWQFMIAGSIAG  EHMAMFP
Sbjct: 1    MATEATEATTKFQSPDFRPVPSPPDFHPEIVVSAHDGLRFWQFMIAGSIAGSAEHMAMFP 60

Query: 1169 VDTLKTRMQAITSCPVQSVDLRQVFKSVLKVEGAIGLYRGIGAMGLGAGPAHAVYFSVYE 990
            +DT+KT MQA+ SCP++SV +RQ  +S+LK EG  G YRGIGAMGLGAGPAHAVYF+VYE
Sbjct: 61   IDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYE 120

Query: 989  ICKEYFSRGNPNNSVAHAGSGVIATVASDAVLTPMDVVKQRLQLRSSPYKGVMDCMKTVL 810
             CK++FS G+PNNS+AHA SGV ATVASDAV TPMD+VKQRLQL ++PYKGV+DC+K VL
Sbjct: 121  NCKKFFSGGDPNNSLAHAASGVCATVASDAVFTPMDMVKQRLQLSNNPYKGVLDCIKKVL 180

Query: 809  REEGIGSFYASYKTTVLMNAPFTAVHFATYEAAKRGLMEISPESVSDERXXXXXXXXXXX 630
            R+EG  +FYASY+TTVLMNAPFTAVHFATYEAAKRGLME+SPESV+DE+           
Sbjct: 181  RDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVNDEQWVVHATAGAVA 240

Query: 629  XXXXXXXXTPLDVVKTQLQCQGVCGCDRFTNSSITDVIKTIVKKDGYTGLLRGWKPRMLF 450
                    TPLDVVKTQLQCQGVCGCDRF + SI DVI+TI+KKDGY GL+RGW PRMLF
Sbjct: 241  GASAAFVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLF 300

Query: 449  HAPAAAICWSTYEAGKGFFQEVN 381
            HAPAAAICWSTYEA K FF ++N
Sbjct: 301  HAPAAAICWSTYEALKSFFHDLN 323


>ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|222867653|gb|EEF04784.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  455 bits (1171), Expect = e-125
 Identities = 230/324 (70%), Positives = 260/324 (80%), Gaps = 4/324 (1%)
 Frame = -2

Query: 1340 ATTDVSPAPKFQKP-DFITMTQTPSQETTVSAHDGLEFWQFMIAGSIAGCVEHMAMFPVD 1164
            ATT    +PK++ P DF    + P    + + HDGL FWQFM+AGSIAG +EHMAMFPVD
Sbjct: 3    ATTTTDASPKYRAPTDF--HPEMPELSVSENPHDGLHFWQFMVAGSIAGSIEHMAMFPVD 60

Query: 1163 TLKTRMQAIT---SCPVQSVDLRQVFKSVLKVEGAIGLYRGIGAMGLGAGPAHAVYFSVY 993
            TLKTRMQAI    S PVQ+V++RQ  KS++K EGA G YRGIGAMGLGAGPAHAVYFSVY
Sbjct: 61   TLKTRMQAIVGSGSYPVQNVNVRQACKSIMKNEGAAGFYRGIGAMGLGAGPAHAVYFSVY 120

Query: 992  EICKEYFSRGNPNNSVAHAGSGVIATVASDAVLTPMDVVKQRLQLRSSPYKGVMDCMKTV 813
            E+CK+YFSRG+PNNSVAHA SGV ATVASDAV TPMDVVKQRLQL+SSPYKGV+DC++ V
Sbjct: 121  ELCKQYFSRGDPNNSVAHAVSGVCATVASDAVFTPMDVVKQRLQLKSSPYKGVVDCVRRV 180

Query: 812  LREEGIGSFYASYKTTVLMNAPFTAVHFATYEAAKRGLMEISPESVSDERXXXXXXXXXX 633
            L EEGIG+FYASYKTTV+MNAPFTAVHFATYEAAKRGL+E+SP+   DER          
Sbjct: 181  LVEEGIGAFYASYKTTVVMNAPFTAVHFATYEAAKRGLIEVSPDIADDERLVVHATAGAA 240

Query: 632  XXXXXXXXXTPLDVVKTQLQCQGVCGCDRFTNSSITDVIKTIVKKDGYTGLLRGWKPRML 453
                     TPLDVVKTQLQCQGVCGCDRF++SSI +VIK IVKKDGY GL+RGW PRML
Sbjct: 241  AGALAAIVTTPLDVVKTQLQCQGVCGCDRFSSSSIGNVIKIIVKKDGYQGLMRGWIPRML 300

Query: 452  FHAPAAAICWSTYEAGKGFFQEVN 381
            FHAPAAAICWSTYEA K FF  +N
Sbjct: 301  FHAPAAAICWSTYEASKDFFHRLN 324


>ref|XP_003544903.1| PREDICTED: mitochondrial RNA-splicing protein MRS3-like [Glycine max]
          Length = 324

 Score =  452 bits (1164), Expect = e-125
 Identities = 226/311 (72%), Positives = 248/311 (79%)
 Frame = -2

Query: 1313 KFQKPDFITMTQTPSQETTVSAHDGLEFWQFMIAGSIAGCVEHMAMFPVDTLKTRMQAIT 1134
            KFQ P+F         + TVS HDGL FWQFMIAGSIAGCVEHMAMFPVDT+KTRMQAI 
Sbjct: 8    KFQNPEFRPDFHA---DLTVSTHDGLHFWQFMIAGSIAGCVEHMAMFPVDTVKTRMQAIG 64

Query: 1133 SCPVQSVDLRQVFKSVLKVEGAIGLYRGIGAMGLGAGPAHAVYFSVYEICKEYFSRGNPN 954
            SCPV+SV +R   KS+L+ EG   LYRGIGAMGLGAGPAHAVYFSVYE CK+ FS G+P+
Sbjct: 65   SCPVKSVTVRHALKSILQSEGPSALYRGIGAMGLGAGPAHAVYFSVYETCKKKFSEGSPS 124

Query: 953  NSVAHAGSGVIATVASDAVLTPMDVVKQRLQLRSSPYKGVMDCMKTVLREEGIGSFYASY 774
            N+ AHA SGV ATVASDAV TPMD+VKQRLQL +S YKGV DC+K V+ EEG G+FYASY
Sbjct: 125  NAAAHAASGVCATVASDAVFTPMDMVKQRLQLGNSGYKGVWDCVKRVMSEEGFGAFYASY 184

Query: 773  KTTVLMNAPFTAVHFATYEAAKRGLMEISPESVSDERXXXXXXXXXXXXXXXXXXXTPLD 594
            +TTVLMNAPFTAVHF TYEAAKRGL+E+SPESV DER                   TPLD
Sbjct: 185  RTTVLMNAPFTAVHFTTYEAAKRGLLEVSPESVDDERLVVHATAGAAAGALAAAVTTPLD 244

Query: 593  VVKTQLQCQGVCGCDRFTNSSITDVIKTIVKKDGYTGLLRGWKPRMLFHAPAAAICWSTY 414
            VVKTQLQCQGVCGCDRF + SI DVIKTIVKKDGY GL+RGW PRMLFHAPAAAICWSTY
Sbjct: 245  VVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTY 304

Query: 413  EAGKGFFQEVN 381
            EAGK FFQ+ N
Sbjct: 305  EAGKSFFQDFN 315


>ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis vinifera]
          Length = 327

 Score =  451 bits (1161), Expect = e-124
 Identities = 230/323 (71%), Positives = 256/323 (79%), Gaps = 2/323 (0%)
 Frame = -2

Query: 1343 MATTDVSPAPKFQKPDFITMTQTPSQETTV-SAHDGLEFWQFMIAGSIAGCVEHMAMFPV 1167
            MATT    +PKF+    +        E TV S+HDGLEFWQFMIAGSIAG VEHMAMFPV
Sbjct: 1    MATTTTDASPKFRH---VPQPSDYRPEITVNSSHDGLEFWQFMIAGSIAGSVEHMAMFPV 57

Query: 1166 DTLKTRMQAIT-SCPVQSVDLRQVFKSVLKVEGAIGLYRGIGAMGLGAGPAHAVYFSVYE 990
            DTLKTRMQ I  S P  S+ LRQV  S+LK+EG  GLYRGI AMGLGAGP+HAVYFSVYE
Sbjct: 58   DTLKTRMQVIGGSYPAPSIGLRQVLGSILKMEGPAGLYRGIAAMGLGAGPSHAVYFSVYE 117

Query: 989  ICKEYFSRGNPNNSVAHAGSGVIATVASDAVLTPMDVVKQRLQLRSSPYKGVMDCMKTVL 810
            +CK++FS GNPNNS AHA SGV ATVASDAV+TPMD+VKQRLQL+SSPYKGVMDC+K VL
Sbjct: 118  LCKDFFSAGNPNNSAAHAVSGVFATVASDAVITPMDMVKQRLQLKSSPYKGVMDCVKRVL 177

Query: 809  REEGIGSFYASYKTTVLMNAPFTAVHFATYEAAKRGLMEISPESVSDERXXXXXXXXXXX 630
             EEGI +FYASY+TTV+MNAPFTAVHFATYEAAKRGLME+SPE+  DE            
Sbjct: 178  MEEGIQAFYASYRTTVVMNAPFTAVHFATYEAAKRGLMEVSPENADDENLVVHATAGAVA 237

Query: 629  XXXXXXXXTPLDVVKTQLQCQGVCGCDRFTNSSITDVIKTIVKKDGYTGLLRGWKPRMLF 450
                    TPLDVVKTQLQCQGVCGCDRF++ SI DV++TIVKKDGY GL+RGW PRMLF
Sbjct: 238  GALAAAVTTPLDVVKTQLQCQGVCGCDRFSSGSIRDVLETIVKKDGYGGLMRGWIPRMLF 297

Query: 449  HAPAAAICWSTYEAGKGFFQEVN 381
            HAPAAAICWSTYEA K FF+E N
Sbjct: 298  HAPAAAICWSTYEAAKAFFEEQN 320


>ref|XP_003519270.1| PREDICTED: mitoferrin-like [Glycine max]
          Length = 325

 Score =  451 bits (1159), Expect = e-124
 Identities = 226/312 (72%), Positives = 251/312 (80%), Gaps = 1/312 (0%)
 Frame = -2

Query: 1313 KFQKPDFITMTQTPSQETTVSAHDGLEFWQFMIAGSIAGCVEHMAMFPVDTLKTRMQAIT 1134
            KFQ P+F         + TVS+HDGL+FWQFMIAGSIAGCVEHMAMFPVDT+KTRMQA+ 
Sbjct: 8    KFQNPEFRPDFHA---DLTVSSHDGLQFWQFMIAGSIAGCVEHMAMFPVDTVKTRMQALG 64

Query: 1133 SCPVQSVDLRQVFKSVLKVEGAIGLYRGIGAMGLGAGPAHAVYFSVYEICKEYFSRGNP- 957
            SCPV+SV +R   K++L+ EG   LYRGIGAMGLGAGPAHAVYFSVYE CK+ FS GNP 
Sbjct: 65   SCPVKSVTVRHALKTILQSEGPSALYRGIGAMGLGAGPAHAVYFSVYETCKKKFSEGNPS 124

Query: 956  NNSVAHAGSGVIATVASDAVLTPMDVVKQRLQLRSSPYKGVMDCMKTVLREEGIGSFYAS 777
            +N+ AHA SGV ATVASDAVLTPMD+VKQRLQL +S YKGV DC+K V+ EEG G+FYAS
Sbjct: 125  SNAAAHAASGVCATVASDAVLTPMDMVKQRLQLGNSGYKGVWDCVKRVMSEEGFGAFYAS 184

Query: 776  YKTTVLMNAPFTAVHFATYEAAKRGLMEISPESVSDERXXXXXXXXXXXXXXXXXXXTPL 597
            Y+TTVLMNAPFTAVHF TYEAAKRGLME+SPESV DER                   TPL
Sbjct: 185  YRTTVLMNAPFTAVHFTTYEAAKRGLMEVSPESVDDERLVVHATAGAAAGGLAAVVTTPL 244

Query: 596  DVVKTQLQCQGVCGCDRFTNSSITDVIKTIVKKDGYTGLLRGWKPRMLFHAPAAAICWST 417
            DVVKTQLQCQGVCGCDRFT+ SI DVI+TIVKKDGY GL+RGW PRMLFHAPAAAICWST
Sbjct: 245  DVVKTQLQCQGVCGCDRFTSGSIGDVIRTIVKKDGYRGLMRGWIPRMLFHAPAAAICWST 304

Query: 416  YEAGKGFFQEVN 381
            YEAGK  FQ+ N
Sbjct: 305  YEAGKSLFQDFN 316


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