BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001244
         (2985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30403.3| unnamed protein product [Vitis vinifera]              889   0.0  
ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal doma...   837   0.0  
ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal doma...   837   0.0  
ref|XP_003529147.1| PREDICTED: RNA polymerase II C-terminal doma...   803   0.0  
ref|XP_003623236.1| RNA polymerase II C-terminal domain phosphat...   786   0.0  

>emb|CBI30403.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score =  889 bits (2298), Expect = 0.0
 Identities = 486/835 (58%), Positives = 592/835 (70%), Gaps = 26/835 (3%)
 Frame = +3

Query: 69   GLKTAVFHGDLYLGEVEIFSTNN--FQFPNNELRINHISSLSERCPPLSILQTISPFSVV 242
            G K+ V+HGDL+LGE++     +  FQFPNNE+R++HIS +SERCPPLSIL TIS FSV 
Sbjct: 5    GFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISSFSVR 64

Query: 243  CKIKSTSN-EKSHFNSLYISCLNDLKTAVVMLGGEELHLVAMPSKIEKLPWFWCCSVPLG 419
            CK++S+S  ++ +  +L+ SC ++LKTAVV++G EELHLVAMPSK +K P FWC SVP G
Sbjct: 65   CKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYSVPCG 124

Query: 420  LYESCLRMLNLRCLSIVFDLDETLIVANTMKSFEDRIDSLQKRLDVENDPLRVSGMSAEL 599
            LY S L MLNLRCL+IVFDLDETLIVANTMKSFEDRID+L+  +  E+D +R+SGMSAEL
Sbjct: 125  LYSSSLWMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALRGWIARESDQVRISGMSAEL 184

Query: 600  RRYVEDRSLLKQYLENDNVVDNGKFYSVLPEEVVSVGSEQEKIFRPVIRLKEKNIVLTRI 779
            +RY++DR+LLKQY END V+DNGK   V  EEV  +    E++ RPVIR  E+NIVLTRI
Sbjct: 185  KRYIDDRALLKQYTENDLVMDNGKILKVQSEEVAPLSDSHERVVRPVIRFPERNIVLTRI 244

Query: 780  NPEIRDTSVLVRLRPAWEDLRSYLNAKGRKRFEVYVCTMAERDYALEMWRLLDPEAHLIS 959
            NPEIRDTSVLVRLRPAWEDLRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPEAHLI 
Sbjct: 245  NPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEAHLIG 304

Query: 960  SNKLLNRIVCVNPGSRKSLPSVFQDGICHPKMAMVIDDRQKVWEDNDQPRVHVVPAFTPY 1139
            S +LL+R+VCV  GSRKSL +VFQ+G CHPKMAMVIDDR KVWED DQPRVHVVP FTPY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVVPPFTPY 364

Query: 1140 YAPQAETANAVPVLCVARNVACNVRAGFFKEFDENLLRKIFELCYEDEIANLPYSPDVSD 1319
            YAPQAET N VP+LCVARNVACNVRAGFFKEFDEN+LR+I EL YEDE+ NLP +PDVS+
Sbjct: 365  YAPQAETTNPVPILCVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPSAPDVSN 424

Query: 1320 FLMSEDTVFAPNENRDVLMSEGISGGEVERRIEKLDEKHTTVDFPTPFVRNNPDLGPEAP 1499
            +LMSED  F PN N +V ++EG+ G EVERR   L++ H  VD     + N+ +   E  
Sbjct: 425  YLMSEDAGFVPNGNANVPIAEGMHGAEVERR---LNQPH-IVDSAASPIANSYEFRSETL 480

Query: 1500 QKPVYISPNVVTYETSRTSLPSQKLGLSEASARLEVNPSELDPGQRRRPLTLQRGQNFQE 1679
            Q P     NVV   +SR  +PSQK  L  A  + + +  E D   +RR L ++ GQ+ + 
Sbjct: 481  QPPALTVQNVVGPTSSRLLMPSQKPSLLGAPIKRDFSSFESDADMKRRLLIMKHGQDVRN 540

Query: 1680 QNFGDPSLLSRLPVQSCRG------WLVEEDSDMDQSNNRPAELTKELIPLQ-EKQAHQN 1838
            Q+ GDP +LSRLP  S         WLVE+DS+    NNR + L +E   L+ +KQ    
Sbjct: 541  QSLGDPPILSRLPQISTSSLHPQGVWLVEDDSNRGHLNNRASGLVQEADVLKPDKQRGHQ 600

Query: 1839 LPSCRTE--SMPSGTSSQLSEVKSQQVYSKREGKKXXXXXXXXXXXXEGEVAINQASNIN 2012
            +P       S P      L ++K+ +V +  E +K            E  V+ NQAS   
Sbjct: 601  IPFGHNTPGSTPVSLLPHLPQLKNDEVSAANERQK--KNLPPASQPSEVGVSQNQASTTG 658

Query: 2013 KEHQSEAGKGAPLPPYIAIGVLQEIGRKCGSKIEFRSVVSTSKDLQFSVEVLFTGEKIGA 2192
            +E Q+EAGK   +PP+++IGVLQEIGR+C SK+EFRSVVSTSKDLQFSVEVLFTGEKIG 
Sbjct: 659  RE-QTEAGKVNMMPPHLSIGVLQEIGRRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGV 717

Query: 2193 GMGKTKKDAQHQAAENALHTLSDEYKAYVAANPGSVDEILSMLPPKNENGFLWD--DAES 2366
            GMGKT+KDAQ QAAENALH+L+D+Y AY   + G+VD+    L   NENGFLWD   A S
Sbjct: 718  GMGKTRKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAGS 777

Query: 2367 DE---EEALPNACTSEAGGGLKALRA---------QEANSPRRPEGIQNKRFKGE 2495
             E   E+  P    SEAG       +         + ANSPR P+ I +KR K E
Sbjct: 778  SELLMEDGFPKESISEAGEMAHGTTSSSVVNQQVQKRANSPRLPQSIPSKRSKEE 832


>ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like [Cucumis sativus]
          Length = 837

 Score =  837 bits (2162), Expect = 0.0
 Identities = 451/822 (54%), Positives = 573/822 (69%), Gaps = 17/822 (2%)
 Frame = +3

Query: 69   GLKTAVFHGDLYLGEVEIF--STNNFQFPNNELRINHISSLSERCPPLSILQTISPFSVV 242
            G K+ VFHGD+ LGE++    +  NFQFPNNE+RI+ IS  SERCPPLS+LQTIS FS+ 
Sbjct: 5    GFKSVVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISSFSLR 64

Query: 243  CKIKSTSN-EKSHFNSLYISCLNDLKTAVVMLGGEELHLVAMPSKIEKLPWFWCCSVPLG 419
            CK++S+   E+ H   L+ SC ++LKTA+V++G EE+HLVAMPSK +  P FWC +VP G
Sbjct: 65   CKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFAVPCG 124

Query: 420  LYESCLRMLNLRCLSIVFDLDETLIVANTMKSFEDRIDSLQKRLDVENDPLRVSGMSAEL 599
            LY SCL MLNLRCL+IVFDLDETLIVANTMKSFEDRI++L+  +  E DPLR+SGMSAEL
Sbjct: 125  LYLSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRIWIAREADPLRISGMSAEL 184

Query: 600  RRYVEDRSLLKQYLENDNVVDNGKFYSVLPEEVVSVGSEQEKIFRPVIRLKEKNIVLTRI 779
            +RYVEDR LLKQY+E+D V DNG+ +    EEV  +    EK+ RP+IRL +KN+VLTRI
Sbjct: 185  KRYVEDRLLLKQYIEHDTVNDNGRIFKAQLEEVPPLNGNCEKVVRPIIRLLDKNLVLTRI 244

Query: 780  NPEIRDTSVLVRLRPAWEDLRSYLNAKGRKRFEVYVCTMAERDYALEMWRLLDPEAHLIS 959
            NPEIRDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDPEAHLI+
Sbjct: 245  NPEIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPEAHLIA 304

Query: 960  SNKLLNRIVCVNPGSRKSLPSVFQDGICHPKMAMVIDDRQKVWEDNDQPRVHVVPAFTPY 1139
            + +LL R+VCV  GS+KSL +VFQ G CHPKMAMVIDDR KVWED DQPRVHVVPAFTPY
Sbjct: 305  TKQLLERVVCVKSGSKKSLLNVFQSGSCHPKMAMVIDDRSKVWEDKDQPRVHVVPAFTPY 364

Query: 1140 YAPQAETANAVPVLCVARNVACNVRAGFFKEFDENLLRKIFELCYEDEIANLPYSPDVSD 1319
            YAPQAETANAVPVLCVARNVACNVR  +FKE+DE+LLR+I E+ YED++ +LP +PDVS 
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGCYFKEYDESLLRRILEISYEDDVVDLPPAPDVSS 424

Query: 1320 FLMSEDTVFAPNENRDVLMSEGISGGEVERRIEKLDEKHTTVDFPTPFVRNNPDLGPEAP 1499
            ++MSE+  F PNE  +  + EG++G EVERR+ + D+KH  +D       +  D   +  
Sbjct: 425  YMMSEEAGFVPNETVNAPICEGMNGAEVERRLNQPDDKHV-IDMANNPTTSQTDARADTS 483

Query: 1500 QKPVYISPNVVTYETSRTSLPSQKLGLSEASARLEVNPSELDPGQRRRPLTLQRGQNFQE 1679
            Q P  ++PN+   ++SRT LPSQK GL  A  R +++    D   +R  L ++   + + 
Sbjct: 484  QLPTPLNPNITGPKSSRTLLPSQKPGLLGAPVRRDISS---DHDMKRGLLAMKPSIDLRT 540

Query: 1680 QNFGDPSLLSRLPVQ-SCRGW------LVEEDSDMDQSNNRPAELTKE--LIPLQEKQAH 1832
            Q FGDP +LSR+  Q S  G       LV+EDS     N RP+ L  E       + ++H
Sbjct: 541  QTFGDPPILSRMSPQISASGLQVLGASLVDEDSSQGHQNRRPSGLIPESDASKSDKHRSH 600

Query: 1833 QNLPSCRTESMPSGTSSQLSEVKSQQVYSKREGKKXXXXXXXXXXXXEGEVAINQASNIN 2012
            QNL S  ++++ +G ++                                 ++ N ASN N
Sbjct: 601  QNLFSNNSQAL-TGVAA---------------------------------ISQNHASNNN 626

Query: 2013 KEHQSEAGKGAPLPPYIAIGVLQEIGRKCGSKIEFRSVVSTSKDLQFSVEVLFTGEKIGA 2192
            KEHQ+EAG  +  PP + IGVLQEIGR+C SK+EF++VVSTSKDLQFSVEVLFTGEKIG 
Sbjct: 627  KEHQTEAGIVSIPPPSLYIGVLQEIGRRCSSKVEFKTVVSTSKDLQFSVEVLFTGEKIGV 686

Query: 2193 GMGKTKKDAQHQAAENALHTLSDEYKAYVAANPGSVDEILSMLPPKNENGFLWDDA---- 2360
            G+GKT+KDAQ QAAENALH L+D+Y A++    G +D  L  L    ENGFLWD A    
Sbjct: 687  GLGKTRKDAQQQAAENALHNLADKYAAHIKPLMGPMDADLDKLSIGVENGFLWDTAAPAV 746

Query: 2361 -ESDEEEALPNACTSEAGGGLKALRAQEANSPRRPEGIQNKR 2483
             E  +EE + +   S  G         ++ + ++P+ +Q ++
Sbjct: 747  NELPKEEDVWHKENSSEGCDEPESTNSDSTNHQQPQHVQKRQ 788


>ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like [Cucumis sativus]
          Length = 829

 Score =  837 bits (2162), Expect = 0.0
 Identities = 451/822 (54%), Positives = 573/822 (69%), Gaps = 17/822 (2%)
 Frame = +3

Query: 69   GLKTAVFHGDLYLGEVEIF--STNNFQFPNNELRINHISSLSERCPPLSILQTISPFSVV 242
            G K+ VFHGD+ LGE++    +  NFQFPNNE+RI+ IS  SERCPPLS+LQTIS FS+ 
Sbjct: 5    GFKSVVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISSFSLR 64

Query: 243  CKIKSTSN-EKSHFNSLYISCLNDLKTAVVMLGGEELHLVAMPSKIEKLPWFWCCSVPLG 419
            CK++S+   E+ H   L+ SC ++LKTA+V++G EE+HLVAMPSK +  P FWC +VP G
Sbjct: 65   CKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFAVPCG 124

Query: 420  LYESCLRMLNLRCLSIVFDLDETLIVANTMKSFEDRIDSLQKRLDVENDPLRVSGMSAEL 599
            LY SCL MLNLRCL+IVFDLDETLIVANTMKSFEDRI++L+  +  E DPLR+SGMSAEL
Sbjct: 125  LYLSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRIWIAREADPLRISGMSAEL 184

Query: 600  RRYVEDRSLLKQYLENDNVVDNGKFYSVLPEEVVSVGSEQEKIFRPVIRLKEKNIVLTRI 779
            +RYVEDR LLKQY+E+D V DNG+ +    EEV  +    EK+ RP+IRL +KN+VLTRI
Sbjct: 185  KRYVEDRLLLKQYIEHDTVNDNGRIFKAQLEEVPPLNGNCEKVVRPIIRLLDKNLVLTRI 244

Query: 780  NPEIRDTSVLVRLRPAWEDLRSYLNAKGRKRFEVYVCTMAERDYALEMWRLLDPEAHLIS 959
            NPEIRDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDPEAHLI+
Sbjct: 245  NPEIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPEAHLIA 304

Query: 960  SNKLLNRIVCVNPGSRKSLPSVFQDGICHPKMAMVIDDRQKVWEDNDQPRVHVVPAFTPY 1139
            + +LL R+VCV  GS+KSL +VFQ G CHPKMAMVIDDR KVWED DQPRVHVVPAFTPY
Sbjct: 305  TKQLLERVVCVKSGSKKSLLNVFQSGSCHPKMAMVIDDRSKVWEDKDQPRVHVVPAFTPY 364

Query: 1140 YAPQAETANAVPVLCVARNVACNVRAGFFKEFDENLLRKIFELCYEDEIANLPYSPDVSD 1319
            YAPQAETANAVPVLCVARNVACNVR  +FKE+DE+LLR+I E+ YED++ +LP +PDVS 
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGCYFKEYDESLLRRILEISYEDDVVDLPPAPDVSS 424

Query: 1320 FLMSEDTVFAPNENRDVLMSEGISGGEVERRIEKLDEKHTTVDFPTPFVRNNPDLGPEAP 1499
            ++MSE+  F PNE  +  + EG++G EVERR+ + D+KH  +D       +  D   +  
Sbjct: 425  YMMSEEAGFVPNETVNAPICEGMNGAEVERRLNQPDDKHV-IDMANNPTTSQTDARADTS 483

Query: 1500 QKPVYISPNVVTYETSRTSLPSQKLGLSEASARLEVNPSELDPGQRRRPLTLQRGQNFQE 1679
            Q P  ++PN+   ++SRT LPSQK GL  A  R +++    D   +R  L ++   + + 
Sbjct: 484  QLPTPLNPNITGPKSSRTLLPSQKPGLLGAPVRRDISS---DHDMKRGLLAMKPSIDLRT 540

Query: 1680 QNFGDPSLLSRLPVQ-SCRGW------LVEEDSDMDQSNNRPAELTKE--LIPLQEKQAH 1832
            Q FGDP +LSR+  Q S  G       LV+EDS     N RP+ L  E       + ++H
Sbjct: 541  QTFGDPPILSRMSPQISASGLQVLGASLVDEDSSQGHQNRRPSGLIPESDASKSDKHRSH 600

Query: 1833 QNLPSCRTESMPSGTSSQLSEVKSQQVYSKREGKKXXXXXXXXXXXXEGEVAINQASNIN 2012
            QNL S  ++++ +G ++                                 ++ N ASN N
Sbjct: 601  QNLFSNNSQAL-TGVAA---------------------------------ISQNHASNNN 626

Query: 2013 KEHQSEAGKGAPLPPYIAIGVLQEIGRKCGSKIEFRSVVSTSKDLQFSVEVLFTGEKIGA 2192
            KEHQ+EAG  +  PP + IGVLQEIGR+C SK+EF++VVSTSKDLQFSVEVLFTGEKIG 
Sbjct: 627  KEHQTEAGIVSIPPPSLYIGVLQEIGRRCSSKVEFKTVVSTSKDLQFSVEVLFTGEKIGV 686

Query: 2193 GMGKTKKDAQHQAAENALHTLSDEYKAYVAANPGSVDEILSMLPPKNENGFLWDDA---- 2360
            G+GKT+KDAQ QAAENALH L+D+Y A++    G +D  L  L    ENGFLWD A    
Sbjct: 687  GLGKTRKDAQQQAAENALHNLADKYAAHIKPLMGPMDADLDKLSIGVENGFLWDTAAPAV 746

Query: 2361 -ESDEEEALPNACTSEAGGGLKALRAQEANSPRRPEGIQNKR 2483
             E  +EE + +   S  G         ++ + ++P+ +Q ++
Sbjct: 747  NELPKEEDVWHKENSSEGCDEPESTNSDSTNHQQPQHVQKRQ 788


>ref|XP_003529147.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like [Glycine max]
          Length = 830

 Score =  803 bits (2075), Expect = 0.0
 Identities = 443/833 (53%), Positives = 573/833 (68%), Gaps = 23/833 (2%)
 Frame = +3

Query: 69   GLKTAVFHGDLYLGEVEIFST----------NNFQFPNNELRINHISSLSERCPPLSILQ 218
            G K  V+ GD ++GE+++             NNF+FPNNE+RI+H S+ SERCPPLSILQ
Sbjct: 5    GFKHEVYDGDKHIGELDVIPPSSLTTTTSFHNNFRFPNNEIRIHHFSAKSERCPPLSILQ 64

Query: 219  TISPFSVVCKIKST-SNEKSHFNSLYISCLNDLKTAVVMLGGEELHLVAMPSKIEKLPWF 395
            T++ F+V CK+ S+ + E+    +++ SC  ++KTAVV++  EE+HLV+MPSK +K P F
Sbjct: 65   TVAAFNVRCKLDSSVATEQKELIAIHASCFYEMKTAVVVVNDEEIHLVSMPSKRKKFPCF 124

Query: 396  WCCSVPLGLYESCLRMLNLRCLSIVFDLDETLIVANTMKSFEDRIDSLQKRLDVENDPLR 575
            WC +VPLGLY++CL MLNLRCL+IVFDLDETLIVANTMKSFEDRI++L+  L  E DPLR
Sbjct: 125  WCFAVPLGLYDACLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLSRETDPLR 184

Query: 576  VSGMSAELRRYVEDRSLLKQYLENDNVVDNGKFYSVLPEEVVSVGSEQEKIFRPVIRLKE 755
            V GMS+EL+RY+EDR LLKQY E+D VVDNGK Y V  EE   +    EK+ RPV+RL+E
Sbjct: 185  VQGMSSELKRYLEDRLLLKQYAESDTVVDNGKVYKVQMEEAPPLSGSHEKLVRPVVRLQE 244

Query: 756  KNIVLTRINPEIRDTSVLVRLRPAWEDLRSYLNAKGRKRFEVYVCTMAERDYALEMWRLL 935
            +NIVLTRINPEIRDTSVLVRLRPAW+DLRSYL AKGRKRFEVYVCTMAERDYALE+WRLL
Sbjct: 245  RNIVLTRINPEIRDTSVLVRLRPAWDDLRSYLTAKGRKRFEVYVCTMAERDYALEIWRLL 304

Query: 936  DPEAHLISSNKLLNRIVCVNPGSRKSLPSVFQDGICHPKMAMVIDDRQKVWEDNDQPRVH 1115
            DP AHLI   ++LNR++CV  GSRKSL +VFQDG+CHPKMAMVIDDR KVW D DQPRVH
Sbjct: 305  DPGAHLIGLKQVLNRVICVKSGSRKSLLNVFQDGVCHPKMAMVIDDRSKVWVDKDQPRVH 364

Query: 1116 VVPAFTPYYAPQAETANAVPVLCVARNVACNVRAGFFKEFDENLLRKIFELCYEDEIANL 1295
            VVPAFTPYYAPQAETANAVPVLCVARNVACNVR  FFKEFDE+LL++I E+ +ED+I  L
Sbjct: 365  VVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDESLLQRIAEIFFEDDIGLL 424

Query: 1296 PYSPDVSDFLMSEDTVFAPNENRDVLMSEGISGGEVERRIEKLDEKHTTVDFPTPFVRNN 1475
            P+ PDVS++LMSED    PN N +   SEG++G EVERR+ + D+K  +VD  T  + N+
Sbjct: 425  PHPPDVSNYLMSED---VPNGNANAPFSEGMNGAEVERRLSQPDDKF-SVDLSTRPMTNS 480

Query: 1476 PDLGPEAPQKPVYISPNVVTYETSRTSLPSQKLGLSEASARLEVNPSELDPGQRRRPLTL 1655
             +   E  Q    I  NV    +SRT +PSQK GL     + + N  + D   R+  L +
Sbjct: 481  VEFRHETSQPTAGIISNVTGPGSSRTLIPSQKPGLLGPPVKHDGNSVDRDYDMRKGLLGM 540

Query: 1656 QRGQNFQEQNFGDPSLLSRLP-------VQSCRGWLVEED-SDMDQSNNRPAELTKE--L 1805
            + G + + Q   +P L+ R P       +Q   G LVE+D +   Q+N+ P+   KE  +
Sbjct: 541  RHGPDIRGQISAEPPLILRPPNQASPSLMQPFGGGLVEDDIASRSQTNSWPSASVKESNV 600

Query: 1806 IPLQEKQAHQN-LPSCRTESMPSGTSSQLSEVKSQQVYSKREGKKXXXXXXXXXXXXEGE 1982
            I   + QA Q    +    S P+    Q S++K+++  S  + ++            +G 
Sbjct: 601  IKSDKHQAQQKPFSNSVIGSSPNVLLPQASQLKAEEATSVSDLQRQIVPSKSQLSSEDG- 659

Query: 1983 VAINQASNINKEHQSEAGKGAPLPPYIAIGVLQEIGRKCGSKIEFRSVVSTSKDLQFSVE 2162
            ++ N AS+ +K+ Q EAGK   L P ++I VLQEIGR+C SK+EF+S++STSKDLQFSVE
Sbjct: 660  ISQNHASSNSKDFQHEAGKMNFLSP-LSIQVLQEIGRRCNSKVEFKSILSTSKDLQFSVE 718

Query: 2163 VLFTGEKIGAGMGKTKKDAQHQAAENALHTLSDEYKAYVAANPGSVDEILSMLPPKNENG 2342
            VLFTGEKIG GMG+T+KDAQ QAAENAL +L+++Y A+V     +VD+    L    +NG
Sbjct: 719  VLFTGEKIGVGMGRTRKDAQQQAAENALRSLAEKYVAHVEPQCRAVDKDFDKLSLGCDNG 778

Query: 2343 FLWDDAESDEEEALPNACTSEAGGGLKALRAQ-EANSPRRPEGIQNKRFKGER 2498
            FLWD    +  E  P    S      +AL A+  +++P       +KR    R
Sbjct: 779  FLWDVINPESSEPQPEDGVSRENAS-EALDAETRSSTPNAINQQMDKRMSSPR 830


>ref|XP_003623236.1| RNA polymerase II C-terminal domain phosphatase-like protein
            [Medicago truncatula] gi|355498251|gb|AES79454.1| RNA
            polymerase II C-terminal domain phosphatase-like protein
            [Medicago truncatula]
          Length = 796

 Score =  786 bits (2030), Expect = 0.0
 Identities = 441/801 (55%), Positives = 555/801 (69%), Gaps = 18/801 (2%)
 Frame = +3

Query: 60   MNR-GLKTAVFHGDLYLGEVEIFST---NNFQFPNNELRINHISSLSERCPPLSILQTIS 227
            MNR GLK  VF GD  LGE++ F      NF+FPNNE+ I+H +  SERCPPLSILQ++S
Sbjct: 1    MNRLGLKVEVFEGDARLGELDYFPVIAFQNFRFPNNEIHIHHRTFRSERCPPLSILQSVS 60

Query: 228  PFSVVCKIKST-SNEKSHFNSLYISCLNDLKTAVVMLGGEELHLVAMPSKIEKLPWFWCC 404
             F+V CK+ S+ S E+    +L+ S  +++KTAV ++G EELHLVAMPSK +K P FWC 
Sbjct: 61   AFNVRCKLDSSLSVEQPLLINLHASMFHEMKTAVAVIGDEELHLVAMPSKRKKFPCFWCY 120

Query: 405  SVPLGLYESCLRMLNLRCLSIVFDLDETLIVANTMKSFEDRIDSLQKRLDVENDPLRVSG 584
            +VP  LY++C+ MLNLRCLSIVFDLDETLIVANTMKSFEDRID+L+  L  E DP RV G
Sbjct: 121  TVPARLYDACMGMLNLRCLSIVFDLDETLIVANTMKSFEDRIDALRSWLSRETDPSRVQG 180

Query: 585  MSAELRRYVEDRSLLKQYLENDNVVD-NGKFYSVLPEEVVSVGSEQEKIFRPVIRLKEKN 761
            MS EL+RY+EDR LLKQ+ E+D VVD NG+ Y V  EEV S+   ++K+ RPV+RL+++N
Sbjct: 181  MSGELKRYLEDRLLLKQFAESDCVVDGNGRQYQVQMEEVPSLS--EQKVMRPVVRLQDRN 238

Query: 762  IVLTRINPEIRDTSVLVRLRPAWEDLRSYLNAKGRKRFEVYVCTMAERDYALEMWRLLDP 941
            IVLTRINPEIRDTSVLVRLRPAWEDLR YL AKGRKRFEVYVCTMAERDYALEMWRLLDP
Sbjct: 239  IVLTRINPEIRDTSVLVRLRPAWEDLRCYLTAKGRKRFEVYVCTMAERDYALEMWRLLDP 298

Query: 942  EAHLISSNKLLNRIVCVNPGSRKSLPSVFQDGICHPKMAMVIDDRQKVWEDNDQPRVHVV 1121
             AHLI S ++ +R++CV  GSRKSL +VF DG+CHPKMAMVIDDR KVWED DQPRVHVV
Sbjct: 299  GAHLIGSKQVFDRVICVKSGSRKSLLNVFHDGMCHPKMAMVIDDRSKVWEDKDQPRVHVV 358

Query: 1122 PAFTPYYAPQAETANAVPVLCVARNVACNVRAGFFKEFDENLLRKIFELCYEDEIANLPY 1301
            PAFTPYYAPQAETANAVPVLCVARNVACNVR  FFKEFDEN L++I E+ +EDE+ +LP+
Sbjct: 359  PAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENYLQRIAEIFFEDEVGSLPH 418

Query: 1302 SPDVSDFLMSEDTVFAPNENRDVLMSEGISGGEVERRIEKLDEKHTTVDFPTPFVRNNPD 1481
             PDVS +LMSE+    PN N +  +SEG++G EVERR+ + D+K +      P V N+ +
Sbjct: 419  PPDVSSYLMSEE---VPNGNGNAPISEGMAGAEVERRLNQPDDKLSADLVSRPMV-NSVE 474

Query: 1482 LGPEAPQKPVYISPNVVTYETSRTSLPSQKLGLS---EASARLEVNPSELDPGQRRRPLT 1652
               E  Q    I+PNV    +SR  +PSQK GL+   EA +RL                 
Sbjct: 475  FRHETSQPTAGITPNVAGPGSSRPLIPSQKPGLTINYEAWSRL----------------- 517

Query: 1653 LQRGQNFQEQNFGDPSLLSRLPVQSCRGWLVEED-SDMDQSNNRPAELTKEL-IPLQEKQ 1826
              RGQ+  E     P L+SR P+ S  GWLV++D S+  Q+NN P    KE  +P  EK 
Sbjct: 518  --RGQSSAE-----PPLISRPPIPSYGGWLVDDDISNKTQTNNWPFASAKESNLPKSEKH 570

Query: 1827 AHQNLPSCRTESMPSGT--SSQLSEVKSQQVYSKREGKKXXXXXXXXXXXXEGEVAINQA 2000
              Q  P      + + T   SQ S++K+++  S  + ++            E  ++ N  
Sbjct: 571  QAQPKPFSHRMEVSASTVPLSQASKLKAEEATSVSDFQR--RNIPSKSRLTEDVISPNHT 628

Query: 2001 SNINKEHQSEAGKGAPLPPYIAIGVLQEIGRKCGSKIEFRSVVSTSKDLQFSVEVLFTGE 2180
            S+ +K+ Q+E GK     P ++IGVLQEIG++C SK+EF+ +VSTSKDLQFSVEVLFTGE
Sbjct: 629  SSNSKDFQNEVGK---FDPSLSIGVLQEIGKRCSSKVEFKPIVSTSKDLQFSVEVLFTGE 685

Query: 2181 KIGAGMGKTKKDAQHQAAENALHTLSDEYKAYVAANPGSVDEILSMLPPKNENGFLWD-- 2354
            KIG GMG+T+KDAQ QAAENAL +L+++Y  ++     +V+     L  ++ENGFLWD  
Sbjct: 686  KIGFGMGRTRKDAQQQAAENALRSLAEKYLGHMEPQSKAVNTEFDKLSIEHENGFLWDVV 745

Query: 2355 ---DAESDEEEALPNACTSEA 2408
                 E   E+ L     SEA
Sbjct: 746  NPESVELQTEDGLQRESASEA 766