BLASTX nr result

ID: Coptis21_contig00001230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001230
         (1508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267414.1| PREDICTED: thiazole biosynthetic enzyme, chl...   524   e-146
ref|XP_002317206.1| predicted protein [Populus trichocarpa] gi|2...   522   e-145
gb|AFM35683.1| thiamin biosynthetic protein [Vitis pseudoreticul...   521   e-145
ref|XP_002305603.1| predicted protein [Populus trichocarpa] gi|1...   521   e-145
gb|AAW66657.1| thiamine biosynthetic enzyme [Picrorhiza kurrooa]      513   e-143

>ref|XP_002267414.1| PREDICTED: thiazole biosynthetic enzyme, chloroplastic [Vitis
            vinifera] gi|378524328|sp|F6H7K5.1|THI42_VITVI RecName:
            Full=Thiamine thiazole synthase 2, chloroplastic;
            AltName: Full=Thiazole biosynthetic enzyme 2; Flags:
            Precursor
          Length = 355

 Score =  524 bits (1350), Expect = e-146
 Identities = 265/321 (82%), Positives = 286/321 (89%)
 Frame = -2

Query: 1321 ISTKPKSSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFEPIKE 1142
            +S+ PK +F D++SSFHG P +    +V P++               YDL SF FEPIKE
Sbjct: 11   LSSNPKPAFFDNKSSFHGSPISY---RVLPIKVSHQSPTISMSSVSPYDLQSFKFEPIKE 67

Query: 1141 SIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGGA 962
            SIV+REMTRRYMMDMITYADTDVV+VGAGSAGL+ AYE+SKNP++ VA+IEQSVSPGGGA
Sbjct: 68   SIVAREMTRRYMMDMITYADTDVVIVGAGSAGLSCAYELSKNPSIRVAIIEQSVSPGGGA 127

Query: 961  WLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFN 782
            WLGGQLFSAMVVRKPAH FLDEL IEYDEQD YVVIKHAALFTSTIMSKLLARPNVKLFN
Sbjct: 128  WLGGQLFSAMVVRKPAHHFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFN 187

Query: 781  AVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 602
            AVAAEDLIVK  +VAGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVK
Sbjct: 188  AVAAEDLIVKEERVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 247

Query: 601  RLKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAM 422
            RLKSIG+IDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDG+PRMGPTFGAM
Sbjct: 248  RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAM 307

Query: 421  MISGQKAAHLALKALGQPNVI 359
            MISGQKAAHLAL+ALGQPN I
Sbjct: 308  MISGQKAAHLALRALGQPNAI 328


>ref|XP_002317206.1| predicted protein [Populus trichocarpa] gi|222860271|gb|EEE97818.1|
            predicted protein [Populus trichocarpa]
          Length = 350

 Score =  522 bits (1344), Expect = e-145
 Identities = 265/322 (82%), Positives = 287/322 (89%)
 Frame = -2

Query: 1324 HISTKPKSSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFEPIK 1145
            ++S   KSSFLD++SSFHG P T T  +  P++               YDL SF F+PIK
Sbjct: 8    YLSANLKSSFLDNKSSFHGTPITTTT-RFTPIKSTSPAISMSLTQPS-YDLQSFKFQPIK 65

Query: 1144 ESIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGG 965
            ESIVSREMTRRYM DM+TYADTDVV+VGAGSAGL+ AYE+SKNP+V VA+IEQSVSPGGG
Sbjct: 66   ESIVSREMTRRYMTDMVTYADTDVVIVGAGSAGLSCAYELSKNPSVRVAIIEQSVSPGGG 125

Query: 964  AWLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLF 785
            AWLGGQLFSAM+VRKPAHRFLDELEIEYDE D YVVIKHAALFTSTIMSKLLARPNVKLF
Sbjct: 126  AWLGGQLFSAMIVRKPAHRFLDELEIEYDEADNYVVIKHAALFTSTIMSKLLARPNVKLF 185

Query: 784  NAVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 605
            NAVAAEDLIVKG +V+GVVTNWALVSMNH+TQSCMDPNVMEAK+VVSSCGHDGPFGATGV
Sbjct: 186  NAVAAEDLIVKGGRVSGVVTNWALVSMNHNTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 245

Query: 604  KRLKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGSPRMGPTFGA 425
            KRLKSIG+IDSVPGMKALDMN AEDAIVRLTREIVPGMIVTGMEVAEIDG+PRMGPTFGA
Sbjct: 246  KRLKSIGMIDSVPGMKALDMNAAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGA 305

Query: 424  MMISGQKAAHLALKALGQPNVI 359
            MMISGQKAAHLALKALGQPN +
Sbjct: 306  MMISGQKAAHLALKALGQPNAL 327


>gb|AFM35683.1| thiamin biosynthetic protein [Vitis pseudoreticulata]
          Length = 355

 Score =  521 bits (1343), Expect = e-145
 Identities = 263/321 (81%), Positives = 285/321 (88%)
 Frame = -2

Query: 1321 ISTKPKSSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFEPIKE 1142
            +S+ PK +F D++SSFHG P +    +V P++               YDL SF FEPIKE
Sbjct: 11   LSSNPKPAFFDNKSSFHGSPISY---RVLPIKVSHQSPTISMSSASPYDLQSFKFEPIKE 67

Query: 1141 SIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGGA 962
            SIV+REMTRRYMMDMITYADTDVV+VGAGSAGL+ AYE+SKNP++ VA+IEQSVSPGGGA
Sbjct: 68   SIVAREMTRRYMMDMITYADTDVVIVGAGSAGLSCAYELSKNPSIRVAIIEQSVSPGGGA 127

Query: 961  WLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFN 782
            WLGGQLFSAMVVRKPAH FLDEL IEYDEQD YVVIKHAALFTSTIMSKLLARPNVKL N
Sbjct: 128  WLGGQLFSAMVVRKPAHHFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLLN 187

Query: 781  AVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 602
            AVAAEDLIVK  +VAGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVK
Sbjct: 188  AVAAEDLIVKEERVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 247

Query: 601  RLKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAM 422
            RLKS+G+IDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDG+PRMGPTFGAM
Sbjct: 248  RLKSVGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAM 307

Query: 421  MISGQKAAHLALKALGQPNVI 359
            MISGQKAAHLAL+ALGQPN I
Sbjct: 308  MISGQKAAHLALRALGQPNAI 328


>ref|XP_002305603.1| predicted protein [Populus trichocarpa] gi|118486164|gb|ABK94925.1|
            unknown [Populus trichocarpa] gi|222848567|gb|EEE86114.1|
            predicted protein [Populus trichocarpa]
          Length = 350

 Score =  521 bits (1342), Expect = e-145
 Identities = 268/323 (82%), Positives = 286/323 (88%)
 Frame = -2

Query: 1327 SHISTKPKSSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFEPI 1148
            S +S   KSSFLD +SSFHG P T T  +  P++               YDL SF F+PI
Sbjct: 7    SSLSINLKSSFLDHKSSFHGTPITTTG-RFTPIKSTSPAITMSLTQPS-YDLQSFKFQPI 64

Query: 1147 KESIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGG 968
            KESIVSREMTRRYM DM+TYADTDVVVVGAGSAGL+ AYE+SKNP+V VA+IEQSVSPGG
Sbjct: 65   KESIVSREMTRRYMTDMVTYADTDVVVVGAGSAGLSCAYELSKNPSVRVAIIEQSVSPGG 124

Query: 967  GAWLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKL 788
            GAWLGGQLFSAM+VRKPAHRFLDELEIEYDE D YVVIKHAALFTSTIMSKLLARPNVKL
Sbjct: 125  GAWLGGQLFSAMIVRKPAHRFLDELEIEYDEADNYVVIKHAALFTSTIMSKLLARPNVKL 184

Query: 787  FNAVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATG 608
            FNAVAAEDLIVKG +V+GVVTNWALVSMNH+TQSCMDPNVMEAKIVVSSCGHDGPFGATG
Sbjct: 185  FNAVAAEDLIVKGGRVSGVVTNWALVSMNHNTQSCMDPNVMEAKIVVSSCGHDGPFGATG 244

Query: 607  VKRLKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGSPRMGPTFG 428
            VKRLKSIG+IDSVPGMKALDMN AEDAIVRLTREIVPGMIVTGMEVAEIDG+PRMGPTFG
Sbjct: 245  VKRLKSIGMIDSVPGMKALDMNAAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFG 304

Query: 427  AMMISGQKAAHLALKALGQPNVI 359
            AMMISGQKAAHLALKALGQPN +
Sbjct: 305  AMMISGQKAAHLALKALGQPNAL 327


>gb|AAW66657.1| thiamine biosynthetic enzyme [Picrorhiza kurrooa]
          Length = 354

 Score =  513 bits (1322), Expect = e-143
 Identities = 262/320 (81%), Positives = 282/320 (88%)
 Frame = -2

Query: 1318 STKPKSSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFEPIKES 1139
            S+  KSSFLD++SS +G P +      +                 +YDL++ TF PIKES
Sbjct: 10   SSLTKSSFLDTKSSIYGSPLSSRATIQRVKSSPQNLSVTMSAATPAYDLDNLTFAPIKES 69

Query: 1138 IVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGGAW 959
            IVSREMTRRYMMDMITYADTDVVVVGAGSAGL+ AYE+SKNPN+N+A+IEQSVSPGGGAW
Sbjct: 70   IVSREMTRRYMMDMITYADTDVVVVGAGSAGLSCAYELSKNPNINIAIIEQSVSPGGGAW 129

Query: 958  LGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNA 779
            LG QLFSAMVVRKPA +FLDELEI YDEQD YVVIKHAALFTSTIMSKLLARPNVKLFNA
Sbjct: 130  LGSQLFSAMVVRKPAPKFLDELEIAYDEQDDYVVIKHAALFTSTIMSKLLARPNVKLFNA 189

Query: 778  VAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKR 599
            VAAEDLIVKG +VAGVVTNWALVSMNHDTQSCMDPNVME+KIVVSSCGHDGPFGATGVKR
Sbjct: 190  VAAEDLIVKGGRVAGVVTNWALVSMNHDTQSCMDPNVMESKIVVSSCGHDGPFGATGVKR 249

Query: 598  LKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMM 419
            L+SIG+IDSVPGMKALDMNTAEDAIVRL REIVPGMIVTGMEVAEIDGSPRMGPTFGAMM
Sbjct: 250  LRSIGMIDSVPGMKALDMNTAEDAIVRLAREIVPGMIVTGMEVAEIDGSPRMGPTFGAMM 309

Query: 418  ISGQKAAHLALKALGQPNVI 359
            ISGQKAAHLALKALGQPN +
Sbjct: 310  ISGQKAAHLALKALGQPNAL 329