BLASTX nr result
ID: Coptis21_contig00001224
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00001224
(1826 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like... 734 0.0
ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like... 733 0.0
ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|2... 726 0.0
ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like... 724 0.0
ref|XP_004145709.1| PREDICTED: splicing factor 3A subunit 3-like... 723 0.0
>ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like [Vitis vinifera]
gi|302144037|emb|CBI23142.3| unnamed protein product
[Vitis vinifera]
Length = 509
Score = 734 bits (1896), Expect = 0.0
Identities = 355/510 (69%), Positives = 412/510 (80%), Gaps = 1/510 (0%)
Frame = +1
Query: 64 MSSTLLEVTRSSHEEVERLERLIVKDLQKEPASSRERLFQNHRVRNMIDSITSTTHKLVE 243
MSSTLLEVTR+ HEE+ERLERLIVKDLQ EPASS++RLFQ+HRVRNMID+IT TT KL++
Sbjct: 1 MSSTLLEVTRAGHEEIERLERLIVKDLQNEPASSKDRLFQSHRVRNMIDTITITTEKLID 60
Query: 244 IYEDKDSARKDEIAALGGQSGN-TNVFGAFYDRLKEIREYHRRHPSARVIDAGEDYDELL 420
IYEDKD+ARKDEIAALGGQ+ TNVF AFYDRLKEIREYHR+H +ARV+DA E+Y+ELL
Sbjct: 61 IYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRKHQAARVVDANEEYEELL 120
Query: 421 KEEPLVEFSGEEGYGRYFDMHELYNEYINSKFGKLIEYSTYLDIFSQTHEIPRNLKLTGA 600
KEE +EF GEE +GRY D+HELYNEYINSKFG+ IEYS Y+++FS+ +IPR LKLT
Sbjct: 121 KEELRIEFRGEEAFGRYLDLHELYNEYINSKFGEHIEYSAYVEVFSEPQKIPRKLKLTRQ 180
Query: 601 XXXXXXXXXXXXIHFFQRIEPLQDIDRFFSKVESEFEELWANGNVEGWENKGLENGHIPS 780
I+FF+R EPLQD+DR F+K+ ++FEE WANG VEGWEN+ ENG++P+
Sbjct: 181 YREYLENLLEYLIYFFERTEPLQDLDRIFTKLATDFEEQWANGMVEGWENESQENGNVPT 240
Query: 781 HEALIDLDYYSTVEELMEVGPGKLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKK 960
A IDLDYYSTVEE+MEVGP LKEAL+ALGLK+GGTV++RAERLFLTKHTPLEQLD+K
Sbjct: 241 QHAAIDLDYYSTVEEVMEVGPEMLKEALAALGLKTGGTVQQRAERLFLTKHTPLEQLDQK 300
Query: 961 HFLKGSHGVKQNGTAAVSERTGDLKNIALMEVKLKRLCEDLLNEIIVQTKENVEKKQALT 1140
HF KGS +QNGT A + K IAL+E KL+++CE LL E IV+TKEN+EKKQALT
Sbjct: 301 HFAKGSRRSEQNGTPAAPKEADSSKEIALLEAKLRKICE-LLYETIVRTKENIEKKQALT 359
Query: 1141 FXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 1320
+ QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
Sbjct: 360 YEEMEAEREEEEVQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 419
Query: 1321 GNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIEEAQELWRKIQQRQGVNKW 1500
GNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNE+TSI+EA+ LW +IQ+RQG+NKW
Sbjct: 420 GNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAKVLWERIQERQGLNKW 479
Query: 1501 RPXXXXXXXXXXGNIYNKKTYTDLQRQGLL 1590
RP GNIYNKKTYTDLQRQGL+
Sbjct: 480 RPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 509
>ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
Length = 509
Score = 733 bits (1891), Expect = 0.0
Identities = 356/510 (69%), Positives = 410/510 (80%), Gaps = 1/510 (0%)
Frame = +1
Query: 64 MSSTLLEVTRSSHEEVERLERLIVKDLQKEPASSRERLFQNHRVRNMIDSITSTTHKLVE 243
MSST+LEVTR++HEEVERLERLIVK+LQ +PAS++ERL+Q+HRVRNMID+ITSTT KL+
Sbjct: 1 MSSTVLEVTRAAHEEVERLERLIVKELQNDPASNKERLYQSHRVRNMIDTITSTTEKLIG 60
Query: 244 IYEDKDSARKDEIAALGGQSGN-TNVFGAFYDRLKEIREYHRRHPSARVIDAGEDYDELL 420
IYED D+ARKDEIAALGGQ+ NVF AFYDRLKEIREYHR+HP ARV+DA +DY+ LL
Sbjct: 61 IYEDSDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPVARVVDANDDYETLL 120
Query: 421 KEEPLVEFSGEEGYGRYFDMHELYNEYINSKFGKLIEYSTYLDIFSQTHEIPRNLKLTGA 600
EE +EFSGEE GRY D+HELY +Y+NSKFG+ IEYS YLD+FS T +IPR +K+T
Sbjct: 121 NEELQIEFSGEEALGRYLDLHELYYQYVNSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQ 180
Query: 601 XXXXXXXXXXXXIHFFQRIEPLQDIDRFFSKVESEFEELWANGNVEGWENKGLENGHIPS 780
++FFQR EPLQD+DR SKV +EFEE WA G V+GWEN ENGH+ +
Sbjct: 181 YREYLANLLEYLLYFFQRTEPLQDLDRILSKVTTEFEESWAVGKVQGWENDNQENGHVLA 240
Query: 781 HEALIDLDYYSTVEELMEVGPGKLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKK 960
A IDLDYYSTVEELMEVGP +LKEAL+ALGLK+GGTV++RAERLFLTKHTPLE+LDKK
Sbjct: 241 EHATIDLDYYSTVEELMEVGPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDKK 300
Query: 961 HFLKGSHGVKQNGTAAVSERTGDLKNIALMEVKLKRLCEDLLNEIIVQTKENVEKKQALT 1140
HF KG+ GV++NG AAVS+ G+ K IALME K+ +LC DLL E I +TK+NV KKQALT
Sbjct: 301 HFAKGARGVEKNGVAAVSQEDGNSKEIALMEAKMTKLC-DLLEETIARTKDNVVKKQALT 359
Query: 1141 FXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 1320
+ QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
Sbjct: 360 YEEMEAEREEEETQEDTESEDEEEQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 419
Query: 1321 GNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIEEAQELWRKIQQRQGVNKW 1500
GN+SYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNE+TSIEEA+ELW+KIQQRQGVNKW
Sbjct: 420 GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKW 479
Query: 1501 RPXXXXXXXXXXGNIYNKKTYTDLQRQGLL 1590
RP GNIYNKKTYTDLQRQGL+
Sbjct: 480 RPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 509
>ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|222858447|gb|EEE95994.1|
predicted protein [Populus trichocarpa]
Length = 509
Score = 726 bits (1874), Expect = 0.0
Identities = 354/510 (69%), Positives = 408/510 (80%), Gaps = 1/510 (0%)
Frame = +1
Query: 64 MSSTLLEVTRSSHEEVERLERLIVKDLQKEPASSRERLFQNHRVRNMIDSITSTTHKLVE 243
MSS LLEVTR+SHEEVERLERLIVKDLQ EPA++++RLFQ+HRVRNMID+I +TT KLVE
Sbjct: 1 MSSNLLEVTRASHEEVERLERLIVKDLQNEPANNKDRLFQSHRVRNMIDNIITTTEKLVE 60
Query: 244 IYEDKDSARKDEIAALGGQSG-NTNVFGAFYDRLKEIREYHRRHPSARVIDAGEDYDELL 420
+YEDKD+AR+DEIAALGGQ+ TNVF AFYDRLKEIREYHRRHP+ARV+DA EDY+ +L
Sbjct: 61 VYEDKDNARRDEIAALGGQTAMGTNVFSAFYDRLKEIREYHRRHPAARVVDANEDYEAML 120
Query: 421 KEEPLVEFSGEEGYGRYFDMHELYNEYINSKFGKLIEYSTYLDIFSQTHEIPRNLKLTGA 600
KEEP++EF+GEE +G+Y DMHELYN+Y N KF K IEYSTYLDIFSQ + +P LK +
Sbjct: 121 KEEPVIEFTGEEAFGKYLDMHELYNQYNNLKFEKPIEYSTYLDIFSQPNIVPHKLKFSRR 180
Query: 601 XXXXXXXXXXXXIHFFQRIEPLQDIDRFFSKVESEFEELWANGNVEGWENKGLENGHIPS 780
++FFQR EPLQD+DR FSKV +EFEE W N V+GWE ENGH+ +
Sbjct: 181 YREYMENLLEYLVYFFQRTEPLQDLDRIFSKVTTEFEEQWENDAVQGWEKTSQENGHLSA 240
Query: 781 HEALIDLDYYSTVEELMEVGPGKLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKK 960
+IDLD+YSTVEEL EVGP KLKEAL+ALGLKSGGTV++RAERLFLTK TPLE+LDKK
Sbjct: 241 DHTVIDLDFYSTVEELKEVGPEKLKEALAALGLKSGGTVQQRAERLFLTKDTPLEKLDKK 300
Query: 961 HFLKGSHGVKQNGTAAVSERTGDLKNIALMEVKLKRLCEDLLNEIIVQTKENVEKKQALT 1140
HF+KGS G + NG AA S+ + K IALME K+ +LC DLL+E IV+TKENV KKQALT
Sbjct: 301 HFVKGSRGSEPNGGAATSKEVDNSKEIALMEAKINKLC-DLLDETIVRTKENVVKKQALT 359
Query: 1141 FXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 1320
+ QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
Sbjct: 360 YDEMEAEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 419
Query: 1321 GNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIEEAQELWRKIQQRQGVNKW 1500
GN+SYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNE+TSI+EAQELW+ IQ+RQGVNKW
Sbjct: 420 GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAQELWKGIQERQGVNKW 479
Query: 1501 RPXXXXXXXXXXGNIYNKKTYTDLQRQGLL 1590
RP GNIYN+KTYTDLQRQGL+
Sbjct: 480 RPDLEEEYEDKEGNIYNRKTYTDLQRQGLI 509
>ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
Length = 509
Score = 724 bits (1868), Expect = 0.0
Identities = 350/510 (68%), Positives = 407/510 (79%), Gaps = 1/510 (0%)
Frame = +1
Query: 64 MSSTLLEVTRSSHEEVERLERLIVKDLQKEPASSRERLFQNHRVRNMIDSITSTTHKLVE 243
MSST+LEVTR++HEEVERLERLIVK+LQ +PAS++ERL+Q+HRVRNMID+ITSTT KL+
Sbjct: 1 MSSTVLEVTRAAHEEVERLERLIVKELQNDPASNKERLYQSHRVRNMIDTITSTTEKLIG 60
Query: 244 IYEDKDSARKDEIAALGGQSGN-TNVFGAFYDRLKEIREYHRRHPSARVIDAGEDYDELL 420
+YED D+ARKDEIAALGGQ+ NVF AFYDRLKEIREYHR+HP ARV+DA +DY+ LL
Sbjct: 61 VYEDNDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPVARVVDANDDYETLL 120
Query: 421 KEEPLVEFSGEEGYGRYFDMHELYNEYINSKFGKLIEYSTYLDIFSQTHEIPRNLKLTGA 600
EEP +EFSGEE GRY D+HELY +Y+NSKFG+ IEYS YLD+FS T +IPR +K+T
Sbjct: 121 NEEPQIEFSGEESLGRYLDLHELYYQYVNSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQ 180
Query: 601 XXXXXXXXXXXXIHFFQRIEPLQDIDRFFSKVESEFEELWANGNVEGWENKGLENGHIPS 780
++FFQR EPLQD+DR SKV +EFEE W G V+ WEN ENGH+ +
Sbjct: 181 YREYLANLLEYLLYFFQRTEPLQDLDRILSKVTTEFEESWVVGKVQRWENDNQENGHVLA 240
Query: 781 HEALIDLDYYSTVEELMEVGPGKLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKK 960
A IDLDYYST+EELMEVGP +LKEAL+ALGLK+GGTV++RAERLFLTKHTPLE+LD+K
Sbjct: 241 EHAPIDLDYYSTIEELMEVGPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDRK 300
Query: 961 HFLKGSHGVKQNGTAAVSERTGDLKNIALMEVKLKRLCEDLLNEIIVQTKENVEKKQALT 1140
HF KG+ GV++NG AAV + G+ K IALME K+ +LC LL E I +TK+NV KKQALT
Sbjct: 301 HFAKGACGVEKNGVAAVPQEDGNSKEIALMEAKMTKLCH-LLEETIARTKDNVVKKQALT 359
Query: 1141 FXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 1320
+ QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
Sbjct: 360 YEEMEAEREEEETQEDSESEDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 419
Query: 1321 GNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIEEAQELWRKIQQRQGVNKW 1500
GN+SYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNE+TSIEEA+ELW+KIQQRQGVNKW
Sbjct: 420 GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKW 479
Query: 1501 RPXXXXXXXXXXGNIYNKKTYTDLQRQGLL 1590
RP GNIYNKKTYTDLQRQGL+
Sbjct: 480 RPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 509
>ref|XP_004145709.1| PREDICTED: splicing factor 3A subunit 3-like [Cucumis sativus]
gi|449507630|ref|XP_004163087.1| PREDICTED: LOW QUALITY
PROTEIN: splicing factor 3A subunit 3-like [Cucumis
sativus]
Length = 508
Score = 723 bits (1865), Expect = 0.0
Identities = 355/510 (69%), Positives = 407/510 (79%), Gaps = 1/510 (0%)
Frame = +1
Query: 64 MSSTLLEVTRSSHEEVERLERLIVKDLQKEPASSRERLFQNHRVRNMIDSITSTTHKLVE 243
MSSTLLEVTRSSHEEVERLERLIVK+LQ EPAS ++RL Q+HRVR+MID+I STT KLVE
Sbjct: 1 MSSTLLEVTRSSHEEVERLERLIVKELQNEPASGKDRLLQSHRVRSMIDTIMSTTEKLVE 60
Query: 244 IYEDKDSARKDEIAALGGQS-GNTNVFGAFYDRLKEIREYHRRHPSARVIDAGEDYDELL 420
IYEDKDSARKDEIAALGGQ+ TNVF AFYDRLKEIREYHRRHP+ARV+D ED D LL
Sbjct: 61 IYEDKDSARKDEIAALGGQTTSGTNVFSAFYDRLKEIREYHRRHPAARVVDVSED-DGLL 119
Query: 421 KEEPLVEFSGEEGYGRYFDMHELYNEYINSKFGKLIEYSTYLDIFSQTHEIPRNLKLTGA 600
KEEP +EFSGEE +GRY D+HELYN+YINSKFG+ IEYS+YLD+FSQ +I + LK +
Sbjct: 120 KEEPQIEFSGEEAFGRYLDLHELYNQYINSKFGEAIEYSSYLDVFSQPQKISQKLKFSRQ 179
Query: 601 XXXXXXXXXXXXIHFFQRIEPLQDIDRFFSKVESEFEELWANGNVEGWENKGLENGHIPS 780
I+FFQR EPLQD+DR FSKVESEFEE W G +EGWEN +NGH +
Sbjct: 180 YREYLENLLAYLIYFFQRTEPLQDLDRIFSKVESEFEERWVIGTIEGWENTSQDNGHDSA 239
Query: 781 HEALIDLDYYSTVEELMEVGPGKLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKK 960
+LIDLDYYSTVEEL+E+GP +LKE L ALGLK+GGTV++RAERLFLTKHTPL+ LDKK
Sbjct: 240 QHSLIDLDYYSTVEELVELGPERLKEGLMALGLKTGGTVQQRAERLFLTKHTPLQLLDKK 299
Query: 961 HFLKGSHGVKQNGTAAVSERTGDLKNIALMEVKLKRLCEDLLNEIIVQTKENVEKKQALT 1140
HF K S QNG+A S+ +LK +ALME K+++LC DLL+E I +TK+N+ KKQALT
Sbjct: 300 HFAKLSRQPIQNGSAVASQNNENLKQVALMEAKIEKLC-DLLDETIARTKDNIVKKQALT 358
Query: 1141 FXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 1320
+ QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
Sbjct: 359 YEEIEAEREEEETQAESESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC 418
Query: 1321 GNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIEEAQELWRKIQQRQGVNKW 1500
GN+SYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNE+TSIEEA++LW++IQ+RQGVNKW
Sbjct: 419 GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKDLWKRIQERQGVNKW 478
Query: 1501 RPXXXXXXXXXXGNIYNKKTYTDLQRQGLL 1590
RP GNIYNKKTYTDLQRQGL+
Sbjct: 479 RPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 508