BLASTX nr result

ID: Coptis21_contig00001221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001221
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79841.1| hypothetical protein VITISV_014518 [Vitis vinifera]    76   3e-23
ref|XP_002282937.1| PREDICTED: uncharacterized protein LOC100252...    76   3e-23
gb|ABK21577.1| unknown [Picea sitchensis]                              50   1e-08
gb|ABK23444.1| unknown [Picea sitchensis]                              49   3e-08
ref|XP_003563377.1| PREDICTED: uncharacterized protein LOC100828...    59   2e-06

>emb|CAN79841.1| hypothetical protein VITISV_014518 [Vitis vinifera]
          Length = 611

 Score = 75.9 bits (185), Expect(2) = 3e-23
 Identities = 35/49 (71%), Positives = 40/49 (81%)
 Frame = -2

Query: 640 RQCWEQVDVKVGSELSDIIMNKASPPYYSGSPPIRANNPLIQDVRFHKQ 494
           RQC   +D KVG+ELSDII +KASPPYYS SPPIRA NPL+QD RF +Q
Sbjct: 531 RQCGGHIDAKVGAELSDIITSKASPPYYSVSPPIRAGNPLVQDARFLQQ 579



 Score = 60.1 bits (144), Expect(2) = 3e-23
 Identities = 24/39 (61%), Positives = 34/39 (87%)
 Frame = -3

Query: 822 KSLFDEIKELRKLRTAAMMEKCMAKNEIVVCPKPRRRDL 706
           KSL +E++ELRKLRTA M+EKC+ +N++V CPKPRR+ +
Sbjct: 492 KSLVEELRELRKLRTAVMVEKCLGQNDVVTCPKPRRQQI 530


>ref|XP_002282937.1| PREDICTED: uncharacterized protein LOC100252636 [Vitis vinifera]
           gi|296081781|emb|CBI20786.3| unnamed protein product
           [Vitis vinifera]
          Length = 137

 Score = 75.9 bits (185), Expect(2) = 3e-23
 Identities = 35/49 (71%), Positives = 40/49 (81%)
 Frame = -2

Query: 640 RQCWEQVDVKVGSELSDIIMNKASPPYYSGSPPIRANNPLIQDVRFHKQ 494
           RQC   +D KVG+ELSDII +KASPPYYS SPPIRA NPL+QD RF +Q
Sbjct: 57  RQCGGHIDAKVGAELSDIITSKASPPYYSVSPPIRAGNPLVQDARFLQQ 105



 Score = 60.1 bits (144), Expect(2) = 3e-23
 Identities = 24/39 (61%), Positives = 34/39 (87%)
 Frame = -3

Query: 822 KSLFDEIKELRKLRTAAMMEKCMAKNEIVVCPKPRRRDL 706
           KSL +E++ELRKLRTA M+EKC+ +N++V CPKPRR+ +
Sbjct: 18  KSLVEELRELRKLRTAVMVEKCLGQNDVVTCPKPRRQQI 56


>gb|ABK21577.1| unknown [Picea sitchensis]
          Length = 152

 Score = 50.4 bits (119), Expect(2) = 1e-08
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 10/61 (16%)
 Frame = -2

Query: 628 EQVDVKVGSELSDIIMNKA----------SPPYYSGSPPIRANNPLIQDVRFHKQSVQQT 479
           E  ++  G E+ DII++K+          SPPY+ GSPP R +NPL+ DV+F  Q V  +
Sbjct: 52  EHNELNAGFEILDIILSKSGCSDSSNLGCSPPYFCGSPPSRVDNPLVHDVQFIHQRVPSS 111

Query: 478 P 476
           P
Sbjct: 112 P 112



 Score = 35.8 bits (81), Expect(2) = 1e-08
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -3

Query: 804 IKELRKLRTAAMMEKCMAKNEIVVCPKPRRRDL 706
           +KE+ +LR A M EK  ++ E+V+CPKPRR  L
Sbjct: 1   MKEMGRLRAAFMREK--SEEEVVICPKPRRLGL 31


>gb|ABK23444.1| unknown [Picea sitchensis]
          Length = 166

 Score = 48.9 bits (115), Expect(2) = 3e-08
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 10/54 (18%)
 Frame = -2

Query: 607 GSELSDIIMNKA----------SPPYYSGSPPIRANNPLIQDVRFHKQSVQQTP 476
           G E+ DI ++++          SPPY++GSPP RA+NPL+ D+ F  Q VQ +P
Sbjct: 73  GVEILDIFLSRSGCGDSLNFGCSPPYFNGSPPSRADNPLVHDINFIHQIVQASP 126



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = -3

Query: 807 EIKELRKLRTAAMMEKCMAKNEIVVCPKPRRRDL 706
           E+KE+ + R A M EKC    E+V CPKPRR  L
Sbjct: 15  EMKEMGRPRAAFMREKC---EEVVFCPKPRRAGL 45


>ref|XP_003563377.1| PREDICTED: uncharacterized protein LOC100828366 [Brachypodium
           distachyon]
          Length = 141

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = -2

Query: 640 RQCWEQVDVKVGSELSDIIMNKASPPYYSGSPPIRANNPLIQDVRFHKQSVQ 485
           R+ + + D++   +LSD+I++KASPPY+ GSPP+RA NP++ D +F    VQ
Sbjct: 61  RRPYMEYDLRNAQDLSDLIVSKASPPYFMGSPPVRATNPIVHDKQFRAWKVQ 112


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