BLASTX nr result

ID: Coptis21_contig00001215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001215
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associat...   266   1e-69
ref|XP_003599782.1| Vacuolar protein sorting-associated protein-...   260   9e-68
ref|XP_003532091.1| PREDICTED: vacuolar protein sorting-associat...   257   6e-67
ref|XP_003551927.1| PREDICTED: vacuolar protein sorting-associat...   256   1e-66
ref|XP_002302135.1| predicted protein [Populus trichocarpa] gi|2...   253   9e-66

>ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Vitis vinifera] gi|302143532|emb|CBI22093.3| unnamed
           protein product [Vitis vinifera]
          Length = 838

 Score =  266 bits (680), Expect = 1e-69
 Identities = 134/154 (87%), Positives = 143/154 (92%)
 Frame = -3

Query: 463 EFLHIVPESTESIFKIGSTEPAALLYDALDHFDRRSAKADENLRLIRNSLPKAVEACIDA 284
           EFL  VP+ST SIFKIGST PAALLYDALDHFDRRSAKADENLRLIR+SLP+AVEACIDA
Sbjct: 319 EFLQRVPDSTVSIFKIGSTLPAALLYDALDHFDRRSAKADENLRLIRSSLPEAVEACIDA 378

Query: 283 AGHEFDITRQRTLLRAASYGQAFCSHVQHDRFQEMCKILRVLNAVRYYEIGIPLSIQQYK 104
           AGHEFD++RQRTLLRAASYGQAFCSHVQ DRFQ MCK LRVLNAV   EIGIPLSIQQYK
Sbjct: 379 AGHEFDVSRQRTLLRAASYGQAFCSHVQRDRFQVMCKTLRVLNAVHNSEIGIPLSIQQYK 438

Query: 103 LLTAPVLVGRLINSHQHLVALRVSEYLGLNQEVV 2
           LLTAPVL+GRLIN HQHL+ALR+SEYLG+NQEVV
Sbjct: 439 LLTAPVLIGRLINMHQHLLALRISEYLGMNQEVV 472


>ref|XP_003599782.1| Vacuolar protein sorting-associated protein-like protein [Medicago
           truncatula] gi|355488830|gb|AES70033.1| Vacuolar protein
           sorting-associated protein-like protein [Medicago
           truncatula]
          Length = 856

 Score =  260 bits (664), Expect = 9e-68
 Identities = 129/154 (83%), Positives = 142/154 (92%)
 Frame = -3

Query: 463 EFLHIVPESTESIFKIGSTEPAALLYDALDHFDRRSAKADENLRLIRNSLPKAVEACIDA 284
           EFL  VP+ST SIF IGST PAALLYDALDHFDRRSAKADENLRLIR+SLP+AVEAC+DA
Sbjct: 328 EFLQRVPDSTVSIFTIGSTSPAALLYDALDHFDRRSAKADENLRLIRSSLPEAVEACVDA 387

Query: 283 AGHEFDITRQRTLLRAASYGQAFCSHVQHDRFQEMCKILRVLNAVRYYEIGIPLSIQQYK 104
           AGHEFD++RQRTLLRAASYGQAFCS+   DR QEMCKILRVLNAVR +EIGIPLSIQQYK
Sbjct: 388 AGHEFDVSRQRTLLRAASYGQAFCSNFHRDRIQEMCKILRVLNAVRSFEIGIPLSIQQYK 447

Query: 103 LLTAPVLVGRLINSHQHLVALRVSEYLGLNQEVV 2
           LLT  VL+GRLIN+HQHL+ALR+SEYLG+NQEVV
Sbjct: 448 LLTPSVLIGRLINAHQHLLALRISEYLGMNQEVV 481


>ref|XP_003532091.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Glycine max]
          Length = 843

 Score =  257 bits (657), Expect = 6e-67
 Identities = 129/154 (83%), Positives = 142/154 (92%)
 Frame = -3

Query: 463 EFLHIVPESTESIFKIGSTEPAALLYDALDHFDRRSAKADENLRLIRNSLPKAVEACIDA 284
           EFL  VP+ST SIF IGST PAALLYDALDHFDRRSAKADENLRLIR+SLP+AVEAC+DA
Sbjct: 322 EFLQRVPDSTVSIFTIGSTSPAALLYDALDHFDRRSAKADENLRLIRSSLPEAVEACVDA 381

Query: 283 AGHEFDITRQRTLLRAASYGQAFCSHVQHDRFQEMCKILRVLNAVRYYEIGIPLSIQQYK 104
           AGHEFD++RQ+TLLRAASYGQAFCS+ Q DR QEMCKILRVLNAVR  EIGIPLSIQQYK
Sbjct: 382 AGHEFDVSRQQTLLRAASYGQAFCSNFQRDRIQEMCKILRVLNAVRSPEIGIPLSIQQYK 441

Query: 103 LLTAPVLVGRLINSHQHLVALRVSEYLGLNQEVV 2
           LLT  VL+GRLIN+HQHL+AL+VSEYLG+NQEVV
Sbjct: 442 LLTPSVLIGRLINAHQHLLALKVSEYLGMNQEVV 475


>ref|XP_003551927.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Glycine max]
          Length = 843

 Score =  256 bits (654), Expect = 1e-66
 Identities = 127/154 (82%), Positives = 142/154 (92%)
 Frame = -3

Query: 463 EFLHIVPESTESIFKIGSTEPAALLYDALDHFDRRSAKADENLRLIRNSLPKAVEACIDA 284
           EFL  VP+ST SIF IGST PAALLYDALDHFDRRSAKADENLRLIR+SLP+AVEAC+DA
Sbjct: 322 EFLQRVPDSTVSIFTIGSTSPAALLYDALDHFDRRSAKADENLRLIRSSLPEAVEACVDA 381

Query: 283 AGHEFDITRQRTLLRAASYGQAFCSHVQHDRFQEMCKILRVLNAVRYYEIGIPLSIQQYK 104
           AGHEFD++RQ+TLLRAASYGQAFCS+ Q DR QEMCKILRVLNAVR  EIG+PLSIQQYK
Sbjct: 382 AGHEFDLSRQQTLLRAASYGQAFCSNFQRDRIQEMCKILRVLNAVRSPEIGVPLSIQQYK 441

Query: 103 LLTAPVLVGRLINSHQHLVALRVSEYLGLNQEVV 2
           LLT  VL+GRLIN+HQHL+AL++SEYLG+NQEVV
Sbjct: 442 LLTPSVLIGRLINAHQHLLALKISEYLGMNQEVV 475


>ref|XP_002302135.1| predicted protein [Populus trichocarpa] gi|222843861|gb|EEE81408.1|
           predicted protein [Populus trichocarpa]
          Length = 844

 Score =  253 bits (647), Expect = 9e-66
 Identities = 126/154 (81%), Positives = 143/154 (92%)
 Frame = -3

Query: 463 EFLHIVPESTESIFKIGSTEPAALLYDALDHFDRRSAKADENLRLIRNSLPKAVEACIDA 284
           EF+ +VP+ST SIFKIGST PA+LL+DALDHFDRRSAKADENLRLIR+SLP+AVEACIDA
Sbjct: 322 EFVQLVPDSTVSIFKIGSTSPASLLFDALDHFDRRSAKADENLRLIRSSLPEAVEACIDA 381

Query: 283 AGHEFDITRQRTLLRAASYGQAFCSHVQHDRFQEMCKILRVLNAVRYYEIGIPLSIQQYK 104
           AGHEFD++RQRTLLRAASYGQAFCS+ + D  QEMCK LRVLNAVR  EIGIPLSI+QYK
Sbjct: 382 AGHEFDVSRQRTLLRAASYGQAFCSNFKCDHIQEMCKTLRVLNAVRDPEIGIPLSIEQYK 441

Query: 103 LLTAPVLVGRLINSHQHLVALRVSEYLGLNQEVV 2
           LL+APVLVGRLIN+HQHL+ALR+SEY+GLNQE V
Sbjct: 442 LLSAPVLVGRLINAHQHLLALRISEYVGLNQEEV 475


Top