BLASTX nr result

ID: Coptis21_contig00001214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001214
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002456108.1| hypothetical protein SORBIDRAFT_03g030590 [S...   160   4e-37
gb|ABF69968.1| vacuolar protein sorting 16 (VPS16) family protei...   110   4e-22
ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associat...   107   3e-21
gb|EEE55144.1| hypothetical protein OsJ_02938 [Oryza sativa Japo...    94   4e-17
dbj|BAB90498.1| vacuolar protein sorting-associated protein VPS1...    94   4e-17

>ref|XP_002456108.1| hypothetical protein SORBIDRAFT_03g030590 [Sorghum bicolor]
           gi|241928083|gb|EES01228.1| hypothetical protein
           SORBIDRAFT_03g030590 [Sorghum bicolor]
          Length = 825

 Score =  160 bits (404), Expect = 4e-37
 Identities = 78/119 (65%), Positives = 97/119 (81%), Gaps = 2/119 (1%)
 Frame = +2

Query: 362 MSGNMEVLIGVGDYVLVVDEASIQQVGAS--VGPLQKMVVTQNGKLIACFTHDGRLLVIF 535
           MSG+ EVL+ VGD V+ VDE  +Q +G    +GP+QKM V+ NGKL+A F HDGRLLVI 
Sbjct: 300 MSGSPEVLLAVGDRVIAVDEDGVQVLGVELEIGPVQKMAVSPNGKLLAAFAHDGRLLVIP 359

Query: 536 SDFSKILFEYNCDADENLRLIRNSLPKAVEACIDAAGHEFDVTRQRTLLRAASYGQALC 712
           +DFS+I+FEY CDA +N +LI +SLP+A+EACIDAAGHEFDV+RQRTLLRAA+YG A C
Sbjct: 360 TDFSRIIFEYECDAYDNYQLISSSLPEAIEACIDAAGHEFDVSRQRTLLRAATYGLAFC 418


>gb|ABF69968.1| vacuolar protein sorting 16 (VPS16) family protein [Musa acuminata]
          Length = 280

 Score =  110 bits (275), Expect = 4e-22
 Identities = 50/75 (66%), Positives = 63/75 (84%)
 Frame = +2

Query: 362 MSGNMEVLIGVGDYVLVVDEASIQQVGASVGPLQKMVVTQNGKLIACFTHDGRLLVIFSD 541
           MSGN+EVL+GVGD+VL+V+E  +QQ+G  VGP QKM V+QNGK +A FTHDGRLLVI +D
Sbjct: 189 MSGNVEVLLGVGDHVLLVEEDGVQQLGVGVGPFQKMAVSQNGKYLATFTHDGRLLVILTD 248

Query: 542 FSKILFEYNCDADEN 586
           FSKI+FEY C+  E+
Sbjct: 249 FSKIIFEYTCEHSED 263


>ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Vitis vinifera] gi|302143532|emb|CBI22093.3| unnamed
           protein product [Vitis vinifera]
          Length = 838

 Score =  107 bits (267), Expect = 3e-21
 Identities = 49/72 (68%), Positives = 64/72 (88%)
 Frame = +2

Query: 362 MSGNMEVLIGVGDYVLVVDEASIQQVGASVGPLQKMVVTQNGKLIACFTHDGRLLVIFSD 541
           MSGN+EVL+ V D VL+V+E  +QQ+GA +GPLQKMVV++NGKL+A FTHDGRLLVI +D
Sbjct: 189 MSGNVEVLLAVDDLVLLVEEDGVQQLGAGIGPLQKMVVSRNGKLLASFTHDGRLLVISTD 248

Query: 542 FSKILFEYNCDA 577
           FSKI+FEY+C++
Sbjct: 249 FSKIIFEYSCES 260



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 575 ADENLRLIRNSLPKAVEACIDAAGHEFDVTRQRTLLRAASYGQALC 712
           ADENLRLIR+SLP+AVEACIDAAGHEFDV+RQRTLLRAASYGQA C
Sbjct: 357 ADENLRLIRSSLPEAVEACIDAAGHEFDVSRQRTLLRAASYGQAFC 402


>gb|EEE55144.1| hypothetical protein OsJ_02938 [Oryza sativa Japonica Group]
          Length = 988

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 46/74 (62%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = +2

Query: 362 MSGNMEVLIGVGDYVLVVDEASIQQVGAS--VGPLQKMVVTQNGKLIACFTHDGRLLVIF 535
           MSG+ EVL+ VGD VL VDE  +Q +G    +GP+QKM V+ NGKL+A F HDGRLLVI 
Sbjct: 390 MSGSPEVLLAVGDRVLAVDEDDVQTLGLELEIGPVQKMAVSPNGKLLAAFAHDGRLLVIP 449

Query: 536 SDFSKILFEYNCDA 577
           +DFSKI+FEY CD+
Sbjct: 450 TDFSKIIFEYECDS 463



 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
 Frame = +2

Query: 362 MSGNMEVLIGVGDYVLVVDEASIQQVGAS--VGPLQKMVVTQNGKLIACFTHDGRLLVIF 535
           MSG+ EVL+ VGD VL VDE  +Q +G    +GP+QKM V+ NGKL+A F HDGRLLVI 
Sbjct: 224 MSGSPEVLLAVGDRVLAVDEDDVQTLGLELEIGPVQKMAVSPNGKLLAAFAHDGRLLVIP 283

Query: 536 SDFSKILFE 562
           +DFSKI+F+
Sbjct: 284 TDFSKIIFD 292



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
 Frame = +2

Query: 575 ADENLRLIRNSLPKAVEACIDAAGHEFDVTRQRTLLRAASYGQALCRIWM--WALGYNLL 748
           A +N +LI +SLP+A+EACIDAAGHEFD++RQ  LLRAA+YG    +I M      Y LL
Sbjct: 560 AYDNYQLISSSLPEAIEACIDAAGHEFDISRQHALLRAATYGPGFLQIGMPLTIQQYKLL 619

Query: 749 GIPIAAGAL 775
             P+  G L
Sbjct: 620 TAPVLIGRL 628


>dbj|BAB90498.1| vacuolar protein sorting-associated protein VPS16-like [Oryza
           sativa Japonica Group]
          Length = 892

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 46/74 (62%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = +2

Query: 362 MSGNMEVLIGVGDYVLVVDEASIQQVGAS--VGPLQKMVVTQNGKLIACFTHDGRLLVIF 535
           MSG+ EVL+ VGD VL VDE  +Q +G    +GP+QKM V+ NGKL+A F HDGRLLVI 
Sbjct: 272 MSGSPEVLLAVGDRVLAVDEDDVQTLGLELEIGPVQKMAVSPNGKLLAAFAHDGRLLVIP 331

Query: 536 SDFSKILFEYNCDA 577
           +DFSKI+FEY CD+
Sbjct: 332 TDFSKIIFEYECDS 345


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