BLASTX nr result

ID: Coptis21_contig00001195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001195
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272163.1| PREDICTED: uncharacterized protein LOC100243...   100   3e-19
gb|AFK35837.1| unknown [Lotus japonicus]                               98   1e-18
ref|NP_001235413.1| uncharacterized protein LOC100500255 precurs...    97   2e-18
ref|NP_001234955.1| uncharacterized protein LOC100527616 precurs...    95   2e-17
ref|XP_003596857.1| NAC domain protein [Medicago truncatula] gi|...    94   2e-17

>ref|XP_002272163.1| PREDICTED: uncharacterized protein LOC100243239 [Vitis vinifera]
           gi|296084865|emb|CBI28274.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score =  100 bits (249), Expect = 3e-19
 Identities = 54/108 (50%), Positives = 70/108 (64%)
 Frame = +3

Query: 123 MSRSXXXXXXXXXXXXTSQFEWKKQTVNEFEATPSVSNKQQLYSYRQEAVKEKILISQER 302
           MSR             TSQFEWK+Q V + + + S+S KQQ  S R+EAVKEKI++SQE+
Sbjct: 1   MSRPMLLVFLLLILIITSQFEWKQQLVIDLDPSSSISQKQQQISQREEAVKEKIILSQEK 60

Query: 303 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDRQKILED 446
           +IQ L E++R L+EQL+QCR S  TR   V  L +N    +RQKILED
Sbjct: 61  NIQGLNEVIRSLQEQLKQCRNSKGTRNSSVSPLNDNVIELERQKILED 108


>gb|AFK35837.1| unknown [Lotus japonicus]
          Length = 108

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 54/108 (50%), Positives = 69/108 (63%)
 Frame = +3

Query: 123 MSRSXXXXXXXXXXXXTSQFEWKKQTVNEFEATPSVSNKQQLYSYRQEAVKEKILISQER 302
           MSR             TSQFEWK+  V + ++ P+VS KQ+  S  +E VKEKI++ QE+
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQPLVADVDSNPNVSQKQRQISKPEETVKEKIILVQEK 60

Query: 303 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDRQKILED 446
           +I+RL ELVR L+EQLQQCRGSN T  G    LTE     +RQ+ILED
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGSNGTTNGTSSSLTERILELERQQILED 108


>ref|NP_001235413.1| uncharacterized protein LOC100500255 precursor [Glycine max]
           gi|255629851|gb|ACU15276.1| unknown [Glycine max]
          Length = 108

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 55/108 (50%), Positives = 67/108 (62%)
 Frame = +3

Query: 123 MSRSXXXXXXXXXXXXTSQFEWKKQTVNEFEATPSVSNKQQLYSYRQEAVKEKILISQER 302
           MSR             TSQFEWK+Q V + ++ PSVS KQ   S   E VKEKI++ QE+
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPSVSQKQHQISKAGETVKEKIILVQEK 60

Query: 303 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDRQKILED 446
           +I+RL ELVR L+EQLQQCRG N T  G V  L E     +RQ+ILED
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILELERQQILED 108


>ref|NP_001234955.1| uncharacterized protein LOC100527616 precursor [Glycine max]
           gi|255632782|gb|ACU16744.1| unknown [Glycine max]
          Length = 108

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 52/108 (48%), Positives = 67/108 (62%)
 Frame = +3

Query: 123 MSRSXXXXXXXXXXXXTSQFEWKKQTVNEFEATPSVSNKQQLYSYRQEAVKEKILISQER 302
           MSR             TSQFEWK+Q V + ++ P++  KQ   S  +E VKEKI++ QE+
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPNLPQKQHQISKAEETVKEKIILVQEK 60

Query: 303 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDRQKILED 446
           +I+RL ELVR L+EQLQQCRG N T  G V  L E     +RQ+ILED
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILELERQQILED 108


>ref|XP_003596857.1| NAC domain protein [Medicago truncatula]
           gi|355485905|gb|AES67108.1| NAC domain protein [Medicago
           truncatula]
          Length = 589

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 53/108 (49%), Positives = 68/108 (62%)
 Frame = +3

Query: 123 MSRSXXXXXXXXXXXXTSQFEWKKQTVNEFEATPSVSNKQQLYSYRQEAVKEKILISQER 302
           MSR             TSQFEWK+  V++ E+  SV+ KQ   S  +E VKEKI++ QE+
Sbjct: 482 MSRPMLLVFLLIILIITSQFEWKQPLVSDVESNSSVTQKQHRISNAEETVKEKIILVQEK 541

Query: 303 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDRQKILED 446
           +I+RL ELVR L+EQLQQC+GSN T    V  LTE     +RQ+ILED
Sbjct: 542 NIRRLNELVRHLQEQLQQCKGSNGTINSTVGPLTERILELERQQILED 589


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