BLASTX nr result

ID: Coptis21_contig00001179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001179
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322799.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]   130   4e-28
ref|XP_002530155.1| conserved hypothetical protein [Ricinus comm...   107   3e-21
ref|XP_003553616.1| PREDICTED: uncharacterized protein LOC100786...    97   3e-18
ref|XP_003520710.1| PREDICTED: uncharacterized protein LOC100804...    91   2e-16

>ref|XP_002322799.1| predicted protein [Populus trichocarpa] gi|222867429|gb|EEF04560.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  134 bits (337), Expect = 2e-29
 Identities = 84/160 (52%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
 Frame = -1

Query: 476 SLRRRNSM-TSPLLPKDLHIPNLKQQXXXXXXXXXXXXXTGDLELLSLKPT-AYTSLKEI 303
           +LRRRNS+ TS ++P  L   +L                  D+ LL LK + +YTS+K++
Sbjct: 12  TLRRRNSIATSFVIPTKL---SLHTSSLPPSHLNGTLPSHLDISLLPLKSSLSYTSIKDL 68

Query: 302 LPSLSAVQSPTGAS--TQSIYEIPIRNHLVKQAAWAYLQPMSASPGSANRHSFRRMWGRF 129
           LPS + V SPT A+  T S YEIPIRN LVKQAAWAYLQPMS+SP S+  H  RR+W R 
Sbjct: 69  LPS-ATVNSPTSATSNTTSTYEIPIRNRLVKQAAWAYLQPMSSSPDSSGTHFLRRLWLRL 127

Query: 128 STWYLRNPINACYEFISQRVIPTITRAFDLVLGAIRVRIN 9
           ST   +NPI AC+ FIS RVIP+IT AFD +L AIRV  N
Sbjct: 128 ST---KNPITACFGFISFRVIPSITNAFDRILRAIRVHFN 164


>emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]
          Length = 735

 Score =  130 bits (326), Expect = 4e-28
 Identities = 81/176 (46%), Positives = 99/176 (56%), Gaps = 15/176 (8%)
 Frame = -1

Query: 497  SEPVFQSSLRRRNSMTSPLLPKDLHIPN-------------LKQQXXXXXXXXXXXXXTG 357
            S P   S+LRRRNS+ +  +P  L +P+             ++                 
Sbjct: 560  SHPPPSSNLRRRNSIGTAAIPTKLTLPSKAHYSSSFPRPNGVRVSSSTSSSSPQSSFPNV 619

Query: 356  DLELLSLKPTAYTSLKEILPSLSAVQSPTGASTQS--IYEIPIRNHLVKQAAWAYLQPMS 183
            D EL+SLK  AYTSLK++LPS SA QSPT A T S   YEI IRN LVKQAAWAYLQPMS
Sbjct: 620  DFELISLKSLAYTSLKDLLPSTSAAQSPTAAGTGSGSCYEISIRNRLVKQAAWAYLQPMS 679

Query: 182  ASPGSANRHSFRRMWGRFSTWYLRNPINACYEFISQRVIPTITRAFDLVLGAIRVR 15
            ASPGS+    F RM   FS   LRN ++ C  FI++ +   I RAFD +L  I VR
Sbjct: 680  ASPGSSGGRLFDRMLLGFSMECLRNRVSTCLGFINRHIFSAIIRAFDRILRMIGVR 735


>ref|XP_002530155.1| conserved hypothetical protein [Ricinus communis]
           gi|223530316|gb|EEF32210.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 181

 Score =  107 bits (266), Expect = 3e-21
 Identities = 78/181 (43%), Positives = 100/181 (55%), Gaps = 18/181 (9%)
 Frame = -1

Query: 497 SEPVFQSSLRRRNSM-TSPLLPKDLHIPN-------LKQQXXXXXXXXXXXXXTGD---- 354
           S P    SLRRRNS+ TS  +P  L +P+       L  Q              G+    
Sbjct: 12  SSPPSPPSLRRRNSISTSVFIPAKLTLPSQPFHTSSLPPQSTTNGTINCNGSGNGNDVVA 71

Query: 353 LELLSLKPTA--YTSLKEILPSLSAVQSPTGASTQ----SIYEIPIRNHLVKQAAWAYLQ 192
            EL S K ++  YTSLK+ILPS +AV SPT A+      S YEI IRNHLVKQAAWAYLQ
Sbjct: 72  FELASFKSSSLSYTSLKDILPS-TAVNSPTPAAATPTCGSAYEISIRNHLVKQAAWAYLQ 130

Query: 191 PMSASPGSANRHSFRRMWGRFSTWYLRNPINACYEFISQRVIPTITRAFDLVLGAIRVRI 12
           PMS+SP S+++H  +R+W +FST     PI AC  F        IT  FD ++  I +++
Sbjct: 131 PMSSSPDSSSQHFLQRLWLKFST---AGPITACIRF--------ITLVFDRIICLICIQM 179

Query: 11  N 9
           N
Sbjct: 180 N 180


>ref|XP_003553616.1| PREDICTED: uncharacterized protein LOC100786476 [Glycine max]
          Length = 155

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 72/175 (41%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
 Frame = -1

Query: 524 MGTTTITMNSEPVFQSSLRRRNSMTSPLLPKDLHIPNLKQQXXXXXXXXXXXXXTGDLEL 345
           M  T  T    P     LRR NS+ +P +PK L +P    Q                 EL
Sbjct: 1   MAETESTTTPAPSESPPLRRHNSIAAPSVPK-LFLPATPPQRTT------------SFEL 47

Query: 344 LSLKP---TAYTSLKEILPS-LSAVQSPTGASTQSIYEIPIRNHLVKQAAWAYLQPMSAS 177
           +SLK     +YTSL+++LPS  +AV SPT AS  S  EI IRN LVKQAAWAYLQPMSAS
Sbjct: 48  VSLKSPFSASYTSLRDVLPSPYAAVNSPT-ASAYSGQEISIRNRLVKQAAWAYLQPMSAS 106

Query: 176 PGSANRHSFRRMWGRFSTWYLRNPINACYEFISQRVIPTITRAFDLVLGAIRVRI 12
           PG A+   F           LR     C  F     IP ++R F  +L A+RV +
Sbjct: 107 PGGASTPHF-----------LRRLSATCLGFFYHHFIPVVSRVFSRMLHALRVHV 150


>ref|XP_003520710.1| PREDICTED: uncharacterized protein LOC100804851 [Glycine max]
          Length = 156

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 69/172 (40%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
 Frame = -1

Query: 524 MGTTTITMNSEPVFQSSLRRRNSMTSPLLPKDLHIPNLKQQXXXXXXXXXXXXXTGDLEL 345
           M  T  T    P     L R NS+T P  PK L +P    Q                + L
Sbjct: 1   MAETESTTTHAPPESPPLHRHNSITGPSAPK-LSLPATPPQRTSSFEL---------VSL 50

Query: 344 LSLKPTAYTSLKEILPS-LSAVQSPTGASTQSIYEIPIRNHLVKQAAWAYLQPMSASPGS 168
           +S    +YTSL+++LPS  +AV SPT AS  S  EI IRN LVKQAAWAYLQPMSAS G 
Sbjct: 51  MSPFSASYTSLRDMLPSPYAAVNSPT-ASVYSGQEISIRNRLVKQAAWAYLQPMSASQGG 109

Query: 167 ANRHSFRRMWGRFSTWYLRNPINACYEFISQRVIPTITRAFDLVLGAIRVRI 12
           A+  +F           LR    AC  F      P +TR F  +L A+RV +
Sbjct: 110 ASTPNF-----------LRRLSAACLGFFYHHFFPAVTRFFRRMLHALRVHV 150


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