BLASTX nr result

ID: Coptis21_contig00001164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001164
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305719.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-12
ref|XP_002267082.1| PREDICTED: BES1/BZR1 homolog protein 4 [Viti...    55   9e-11
ref|XP_002285537.2| PREDICTED: BES1/BZR1 homolog protein 4-like ...    55   2e-10
ref|XP_002331704.1| predicted protein [Populus trichocarpa] gi|2...    56   7e-10
gb|ABK93591.1| unknown [Populus trichocarpa]                           56   7e-10

>ref|XP_002305719.1| predicted protein [Populus trichocarpa] gi|222848683|gb|EEE86230.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 58.5 bits (140), Expect(2) = 8e-12
 Identities = 28/57 (49%), Positives = 31/57 (54%)
 Frame = -1

Query: 174 SSPCSSYHQSPCAXXXXXXXXXXXXXXXXXSYITSVQANTDANSLIPWLKNLSSASS 4
           +SPCSSYH+SPCA                  Y  +   N D NSLIPWLKNLSS SS
Sbjct: 89  ASPCSSYHRSPCASYNPSPASSSFPSPVSSHYAANANGNADPNSLIPWLKNLSSGSS 145



 Score = 36.2 bits (82), Expect(2) = 8e-12
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = -2

Query: 251 VSEAKATPEKGCKPLERMDVIGRSTSAA 168
           V E   T  KGCKP+ERMD++G S SA+
Sbjct: 63  VEEDGTTYRKGCKPVERMDIMGGSASAS 90


>ref|XP_002267082.1| PREDICTED: BES1/BZR1 homolog protein 4 [Vitis vinifera]
          Length = 341

 Score = 55.1 bits (131), Expect(2) = 9e-11
 Identities = 27/59 (45%), Positives = 32/59 (54%)
 Frame = -1

Query: 180 YFSSPCSSYHQSPCAXXXXXXXXXXXXXXXXXSYITSVQANTDANSLIPWLKNLSSASS 4
           Y  SPC+SY+ SPCA                  Y  +  A+ DAN+LIPWLKNLSS SS
Sbjct: 102 YNPSPCASYNPSPCASYNPSPASSSFPSPVSSRYAANANASADANALIPWLKNLSSGSS 160



 Score = 36.2 bits (82), Expect(2) = 9e-11
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = -2

Query: 251 VSEAKATPEKGCKPLERMDVIGRSTSAA 168
           V E   T  KGCKP+ERMD++G S SA+
Sbjct: 62  VEEDGTTYRKGCKPVERMDIMGGSASAS 89


>ref|XP_002285537.2| PREDICTED: BES1/BZR1 homolog protein 4-like [Vitis vinifera]
          Length = 371

 Score = 54.7 bits (130), Expect(2) = 2e-10
 Identities = 30/57 (52%), Positives = 32/57 (56%)
 Frame = -1

Query: 174 SSPCSSYHQSPCAXXXXXXXXXXXXXXXXXSYITSVQANTDANSLIPWLKNLSSASS 4
           +SPCSSYH SPCA                 SY  +   N D NSLIPWLKNLSSASS
Sbjct: 134 ASPCSSYHPSPCASYNPSPASSSFPSPASSSY--AANPNADGNSLIPWLKNLSSASS 188



 Score = 35.0 bits (79), Expect(2) = 2e-10
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -2

Query: 233 TPEKGCKPLERMDVIGRSTSAA 168
           T  KGCKP+ERMD++G S SA+
Sbjct: 114 TYRKGCKPVERMDIVGGSASAS 135


>ref|XP_002331704.1| predicted protein [Populus trichocarpa] gi|222874310|gb|EEF11441.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score = 56.2 bits (134), Expect(2) = 7e-10
 Identities = 31/57 (54%), Positives = 33/57 (57%)
 Frame = -1

Query: 174 SSPCSSYHQSPCAXXXXXXXXXXXXXXXXXSYITSVQANTDANSLIPWLKNLSSASS 4
           +SPCSSYH SPCA                 SY  +  AN D NSLIPWLKNLSSASS
Sbjct: 89  TSPCSSYHPSPCASYNPSPGSSSFPSPASSSY--AANANMDCNSLIPWLKNLSSASS 143



 Score = 32.0 bits (71), Expect(2) = 7e-10
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = -2

Query: 233 TPEKGCKPLERMDVIGRS--TSAALAHH 156
           T  KGCKP+ERMD++G S  TS   ++H
Sbjct: 69  TFRKGCKPVERMDILGVSATTSPCSSYH 96


>gb|ABK93591.1| unknown [Populus trichocarpa]
          Length = 328

 Score = 56.2 bits (134), Expect(2) = 7e-10
 Identities = 31/57 (54%), Positives = 33/57 (57%)
 Frame = -1

Query: 174 SSPCSSYHQSPCAXXXXXXXXXXXXXXXXXSYITSVQANTDANSLIPWLKNLSSASS 4
           +SPCSSYH SPCA                 SY  +  AN D NSLIPWLKNLSSASS
Sbjct: 89  TSPCSSYHPSPCASYNPSPGSSSFPSPASSSY--AANANMDCNSLIPWLKNLSSASS 143



 Score = 32.0 bits (71), Expect(2) = 7e-10
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = -2

Query: 233 TPEKGCKPLERMDVIGRS--TSAALAHH 156
           T  KGCKP+ERMD++G S  TS   ++H
Sbjct: 69  TFRKGCKPVERMDILGVSATTSPCSSYH 96


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