BLASTX nr result

ID: Coptis21_contig00001160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001160
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284896.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   176   5e-42
gb|ABK96576.1| unknown [Populus trichocarpa x Populus deltoides]      161   9e-38
ref|XP_002315859.1| predicted protein [Populus trichocarpa] gi|2...   159   4e-37
ref|XP_003632647.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   157   1e-36
ref|XP_002282155.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   157   1e-36

>ref|XP_002284896.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like
           [Vitis vinifera]
          Length = 393

 Score =  176 bits (445), Expect = 5e-42
 Identities = 86/142 (60%), Positives = 104/142 (73%)
 Frame = +1

Query: 235 NYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHXXXXXXXXXXXXXXXXXQIPTIDLS 414
           +YDRAKEVK+FD+SKIGVKGLVDSGIT+IPRIFIH                  IP I LS
Sbjct: 42  HYDRAKEVKQFDESKIGVKGLVDSGITTIPRIFIHPTETISDLKSSNPSGSHSIPVISLS 101

Query: 415 EPRSVTVDQIRQASKTFGFFQVTNHGIPLNVIHRMIDSVKEFNEQPAEIKSRHYSREMGR 594
             RS  VDQIR+AS  FGFFQ+ NHGI  +V+ R + +++ FNEQP E+K+++Y R++G 
Sbjct: 102 GDRSSVVDQIRRASAEFGFFQIINHGISTDVLDRTVAAIRAFNEQPTEVKAQYYRRDIGT 161

Query: 595 GVVFSTNFDLYQSKAASWRDTL 660
           GV FSTNFDLY SKAASWRDTL
Sbjct: 162 GVAFSTNFDLYHSKAASWRDTL 183


>gb|ABK96576.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 408

 Score =  161 bits (408), Expect = 9e-38
 Identities = 92/178 (51%), Positives = 107/178 (60%), Gaps = 10/178 (5%)
 Frame = +1

Query: 157 KEIHNIRNNPIRKKMTIGGNPSTETQNYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFI 336
           K +   RN  I    TI     T  Q YDR+KEVK+FDDSKIGVKGL+DSGITSIPRIFI
Sbjct: 26  KTVSQKRNKKIIMAATIN---DTANQGYDRSKEVKQFDDSKIGVKGLIDSGITSIPRIFI 82

Query: 337 HXXXXXXXXXXXXXXXXXQ-----IPTIDLS-----EPRSVTVDQIRQASKTFGFFQVTN 486
           H                       IPTID+S       RS  VD++ +A + FGFFQV N
Sbjct: 83  HPPETLSDLKSKRSTRLPDSESNLIPTIDISGLEDSNRRSAVVDKVGRACREFGFFQVVN 142

Query: 487 HGIPLNVIHRMIDSVKEFNEQPAEIKSRHYSREMGRGVVFSTNFDLYQSKAASWRDTL 660
           HG+PL V+ R I  +K F+E P E K R Y REMG GV F +N DL+ SKAASWRDTL
Sbjct: 143 HGVPLEVLDRTIGGIKGFHELPTEEKMRWYRREMGSGVSFLSNVDLFHSKAASWRDTL 200


>ref|XP_002315859.1| predicted protein [Populus trichocarpa] gi|222864899|gb|EEF02030.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  159 bits (402), Expect = 4e-37
 Identities = 86/156 (55%), Positives = 100/156 (64%), Gaps = 10/156 (6%)
 Frame = +1

Query: 223 TETQNYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHXXXXXXXXXXXXXXXXXQ--- 393
           T  Q YDR+KEVK+FDDSKIGVKGL+DSGITSIPRIFIH                     
Sbjct: 8   TANQEYDRSKEVKQFDDSKIGVKGLIDSGITSIPRIFIHPPETLSDLKSKRSTRLPDSES 67

Query: 394 --IPTIDLS-----EPRSVTVDQIRQASKTFGFFQVTNHGIPLNVIHRMIDSVKEFNEQP 552
             IPTID+S       RS  VD++ +A + FGFFQV NHG+PL V+ R I  +K F+E P
Sbjct: 68  NLIPTIDISGLEDSNRRSAVVDKVGRACREFGFFQVVNHGVPLEVLDRTIGGIKGFHELP 127

Query: 553 AEIKSRHYSREMGRGVVFSTNFDLYQSKAASWRDTL 660
            E K R Y REMG GV F +N DL+ SKAASWRDTL
Sbjct: 128 TEEKMRWYRREMGSGVSFLSNVDLFHSKAASWRDTL 163


>ref|XP_003632647.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like
           isoform 2 [Vitis vinifera]
          Length = 363

 Score =  157 bits (398), Expect = 1e-36
 Identities = 79/147 (53%), Positives = 103/147 (70%), Gaps = 5/147 (3%)
 Frame = +1

Query: 235 NYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHXXXXXXXXXXXXXXXXXQIPTIDLS 414
           +YDR KEVKEFD+SK+GVKGL DSGITSIPR FIH                  IP IDLS
Sbjct: 7   DYDRMKEVKEFDESKMGVKGLSDSGITSIPRFFIHPPQTLSQLKSSSSSSSPGIPMIDLS 66

Query: 415 E-----PRSVTVDQIRQASKTFGFFQVTNHGIPLNVIHRMIDSVKEFNEQPAEIKSRHYS 579
                  R   VDQIR+ASKT+GFFQV NHG+ ++ +   I+++K F+EQP ++K++HY 
Sbjct: 67  NLDSPHHRPKIVDQIREASKTWGFFQVINHGVAVSALEETINAIKSFHEQPQQVKAKHYV 126

Query: 580 REMGRGVVFSTNFDLYQSKAASWRDTL 660
           RE GRGV++++N DLY+S+AASW D+L
Sbjct: 127 REEGRGVMYASNNDLYRSEAASWHDSL 153


>ref|XP_002282155.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like
           isoform 1 [Vitis vinifera]
          Length = 364

 Score =  157 bits (398), Expect = 1e-36
 Identities = 79/147 (53%), Positives = 103/147 (70%), Gaps = 5/147 (3%)
 Frame = +1

Query: 235 NYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHXXXXXXXXXXXXXXXXXQIPTIDLS 414
           +YDR KEVKEFD+SK+GVKGL DSGITSIPR FIH                  IP IDLS
Sbjct: 7   DYDRMKEVKEFDESKMGVKGLSDSGITSIPRFFIHPPQTLSQLKSSSSSSSPGIPMIDLS 66

Query: 415 E-----PRSVTVDQIRQASKTFGFFQVTNHGIPLNVIHRMIDSVKEFNEQPAEIKSRHYS 579
                  R   VDQIR+ASKT+GFFQV NHG+ ++ +   I+++K F+EQP ++K++HY 
Sbjct: 67  NLDSPHHRPKIVDQIREASKTWGFFQVINHGVAVSALEETINAIKSFHEQPQQVKAKHYV 126

Query: 580 REMGRGVVFSTNFDLYQSKAASWRDTL 660
           RE GRGV++++N DLY+S+AASW D+L
Sbjct: 127 REEGRGVMYASNNDLYRSEAASWHDSL 153


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