BLASTX nr result
ID: Coptis21_contig00001160
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00001160 (661 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284896.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 176 5e-42 gb|ABK96576.1| unknown [Populus trichocarpa x Populus deltoides] 161 9e-38 ref|XP_002315859.1| predicted protein [Populus trichocarpa] gi|2... 159 4e-37 ref|XP_003632647.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 157 1e-36 ref|XP_002282155.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 157 1e-36 >ref|XP_002284896.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Vitis vinifera] Length = 393 Score = 176 bits (445), Expect = 5e-42 Identities = 86/142 (60%), Positives = 104/142 (73%) Frame = +1 Query: 235 NYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHXXXXXXXXXXXXXXXXXQIPTIDLS 414 +YDRAKEVK+FD+SKIGVKGLVDSGIT+IPRIFIH IP I LS Sbjct: 42 HYDRAKEVKQFDESKIGVKGLVDSGITTIPRIFIHPTETISDLKSSNPSGSHSIPVISLS 101 Query: 415 EPRSVTVDQIRQASKTFGFFQVTNHGIPLNVIHRMIDSVKEFNEQPAEIKSRHYSREMGR 594 RS VDQIR+AS FGFFQ+ NHGI +V+ R + +++ FNEQP E+K+++Y R++G Sbjct: 102 GDRSSVVDQIRRASAEFGFFQIINHGISTDVLDRTVAAIRAFNEQPTEVKAQYYRRDIGT 161 Query: 595 GVVFSTNFDLYQSKAASWRDTL 660 GV FSTNFDLY SKAASWRDTL Sbjct: 162 GVAFSTNFDLYHSKAASWRDTL 183 >gb|ABK96576.1| unknown [Populus trichocarpa x Populus deltoides] Length = 408 Score = 161 bits (408), Expect = 9e-38 Identities = 92/178 (51%), Positives = 107/178 (60%), Gaps = 10/178 (5%) Frame = +1 Query: 157 KEIHNIRNNPIRKKMTIGGNPSTETQNYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFI 336 K + RN I TI T Q YDR+KEVK+FDDSKIGVKGL+DSGITSIPRIFI Sbjct: 26 KTVSQKRNKKIIMAATIN---DTANQGYDRSKEVKQFDDSKIGVKGLIDSGITSIPRIFI 82 Query: 337 HXXXXXXXXXXXXXXXXXQ-----IPTIDLS-----EPRSVTVDQIRQASKTFGFFQVTN 486 H IPTID+S RS VD++ +A + FGFFQV N Sbjct: 83 HPPETLSDLKSKRSTRLPDSESNLIPTIDISGLEDSNRRSAVVDKVGRACREFGFFQVVN 142 Query: 487 HGIPLNVIHRMIDSVKEFNEQPAEIKSRHYSREMGRGVVFSTNFDLYQSKAASWRDTL 660 HG+PL V+ R I +K F+E P E K R Y REMG GV F +N DL+ SKAASWRDTL Sbjct: 143 HGVPLEVLDRTIGGIKGFHELPTEEKMRWYRREMGSGVSFLSNVDLFHSKAASWRDTL 200 >ref|XP_002315859.1| predicted protein [Populus trichocarpa] gi|222864899|gb|EEF02030.1| predicted protein [Populus trichocarpa] Length = 371 Score = 159 bits (402), Expect = 4e-37 Identities = 86/156 (55%), Positives = 100/156 (64%), Gaps = 10/156 (6%) Frame = +1 Query: 223 TETQNYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHXXXXXXXXXXXXXXXXXQ--- 393 T Q YDR+KEVK+FDDSKIGVKGL+DSGITSIPRIFIH Sbjct: 8 TANQEYDRSKEVKQFDDSKIGVKGLIDSGITSIPRIFIHPPETLSDLKSKRSTRLPDSES 67 Query: 394 --IPTIDLS-----EPRSVTVDQIRQASKTFGFFQVTNHGIPLNVIHRMIDSVKEFNEQP 552 IPTID+S RS VD++ +A + FGFFQV NHG+PL V+ R I +K F+E P Sbjct: 68 NLIPTIDISGLEDSNRRSAVVDKVGRACREFGFFQVVNHGVPLEVLDRTIGGIKGFHELP 127 Query: 553 AEIKSRHYSREMGRGVVFSTNFDLYQSKAASWRDTL 660 E K R Y REMG GV F +N DL+ SKAASWRDTL Sbjct: 128 TEEKMRWYRREMGSGVSFLSNVDLFHSKAASWRDTL 163 >ref|XP_003632647.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like isoform 2 [Vitis vinifera] Length = 363 Score = 157 bits (398), Expect = 1e-36 Identities = 79/147 (53%), Positives = 103/147 (70%), Gaps = 5/147 (3%) Frame = +1 Query: 235 NYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHXXXXXXXXXXXXXXXXXQIPTIDLS 414 +YDR KEVKEFD+SK+GVKGL DSGITSIPR FIH IP IDLS Sbjct: 7 DYDRMKEVKEFDESKMGVKGLSDSGITSIPRFFIHPPQTLSQLKSSSSSSSPGIPMIDLS 66 Query: 415 E-----PRSVTVDQIRQASKTFGFFQVTNHGIPLNVIHRMIDSVKEFNEQPAEIKSRHYS 579 R VDQIR+ASKT+GFFQV NHG+ ++ + I+++K F+EQP ++K++HY Sbjct: 67 NLDSPHHRPKIVDQIREASKTWGFFQVINHGVAVSALEETINAIKSFHEQPQQVKAKHYV 126 Query: 580 REMGRGVVFSTNFDLYQSKAASWRDTL 660 RE GRGV++++N DLY+S+AASW D+L Sbjct: 127 REEGRGVMYASNNDLYRSEAASWHDSL 153 >ref|XP_002282155.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like isoform 1 [Vitis vinifera] Length = 364 Score = 157 bits (398), Expect = 1e-36 Identities = 79/147 (53%), Positives = 103/147 (70%), Gaps = 5/147 (3%) Frame = +1 Query: 235 NYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHXXXXXXXXXXXXXXXXXQIPTIDLS 414 +YDR KEVKEFD+SK+GVKGL DSGITSIPR FIH IP IDLS Sbjct: 7 DYDRMKEVKEFDESKMGVKGLSDSGITSIPRFFIHPPQTLSQLKSSSSSSSPGIPMIDLS 66 Query: 415 E-----PRSVTVDQIRQASKTFGFFQVTNHGIPLNVIHRMIDSVKEFNEQPAEIKSRHYS 579 R VDQIR+ASKT+GFFQV NHG+ ++ + I+++K F+EQP ++K++HY Sbjct: 67 NLDSPHHRPKIVDQIREASKTWGFFQVINHGVAVSALEETINAIKSFHEQPQQVKAKHYV 126 Query: 580 REMGRGVVFSTNFDLYQSKAASWRDTL 660 RE GRGV++++N DLY+S+AASW D+L Sbjct: 127 REEGRGVMYASNNDLYRSEAASWHDSL 153