BLASTX nr result

ID: Coptis21_contig00001158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001158
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31643.3| unnamed protein product [Vitis vinifera]              157   4e-36
ref|XP_002524204.1| DNA binding protein, putative [Ricinus commu...   147   3e-33
ref|XP_003538417.1| PREDICTED: uncharacterized protein LOC100817...   140   5e-31
ref|XP_002521049.1| DNA binding protein, putative [Ricinus commu...   137   4e-30
ref|XP_003552872.1| PREDICTED: uncharacterized protein LOC100806...   136   6e-30

>emb|CBI31643.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  157 bits (396), Expect = 4e-36
 Identities = 84/154 (54%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
 Frame = +1

Query: 7   GDFGRKMAMRARQTLLPAEWWSTYGGSCPNLARLAIRILSQTCSARVCELRSFPFEQLHK 186
           GDFGRKMA+RAR TLLPAEWWSTYGGSCPNLARLAIR+LSQ CS+ V +    PFEQ+H 
Sbjct: 100 GDFGRKMAIRARDTLLPAEWWSTYGGSCPNLARLAIRVLSQPCSSIVNKRNQIPFEQMHD 159

Query: 187 SKNHLEHQRLCDLVFVXXXXXXXXXXXRKDRDSGQMDPISIDSIDLTEDWVTEKMGYFGS 366
           S+N LEHQRL DLVFV           + +R+    DPIS DS ++ +DWV+ K      
Sbjct: 160 SRNCLEHQRLIDLVFV-QYNLRLMQIVQMNREHDPRDPISFDSSNVVDDWVSGKEACLQD 218

Query: 367 -GDSDWMALHQPVANSTXXXXXXXXXXKLVAGFD 465
            G SDWMAL  P  N+            L AGFD
Sbjct: 219 YGTSDWMALDPPSGNTMLLGPSNDEAEDLGAGFD 252


>ref|XP_002524204.1| DNA binding protein, putative [Ricinus communis]
           gi|223536481|gb|EEF38128.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 753

 Score =  147 bits (371), Expect = 3e-33
 Identities = 76/138 (55%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   ATGDFGRKMAMRARQTLLPAEWWSTYGGSCPNLARLAIRILSQTCSARVCELRSFPFEQL 180
           A+GDFGRKMA+RAR+TLLPAEWWSTYGGSCPNLARLAIR+LSQ CS+   +L     EQ+
Sbjct: 585 ASGDFGRKMAVRARETLLPAEWWSTYGGSCPNLARLAIRVLSQPCSSFGYKLNHISLEQI 644

Query: 181 HKSKNHLEHQRLCDLVFVXXXXXXXXXXXRKDRDSGQMDPISIDSIDLTEDWVTEK-MGY 357
           H +KN LE QRL DLVFV            K  +   +DP+S D I + EDW+ EK +  
Sbjct: 645 HDTKNCLERQRLSDLVFVQYNLRLKQMVG-KSEEQDSVDPLSFDCISILEDWIKEKDIST 703

Query: 358 FGSGDSDWMALHQPVANS 411
               +SDWMAL  P  N+
Sbjct: 704 EDYANSDWMALDPPSVNT 721


>ref|XP_003538417.1| PREDICTED: uncharacterized protein LOC100817502 [Glycine max]
          Length = 759

 Score =  140 bits (352), Expect = 5e-31
 Identities = 73/157 (46%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
 Frame = +1

Query: 1    ATGDFGRKMAMRARQTLLPAEWWSTYGGSCPNLARLAIRILSQTCSARVCELRSFPFEQL 180
            A+GDFGRKMA+RAR  LLP+EWWSTYGG CPNL+RLAIRILSQT S   C+    PFEQ+
Sbjct: 582  ASGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMSCKRNQIPFEQI 641

Query: 181  HKSKNHLEHQRLCDLVFVXXXXXXXXXXXRKDRDSGQMDPISIDSIDLTEDWVTEKMGYF 360
              ++N++E Q L DLVFV            K++D    DP+S D+I   E+W+  +  Y 
Sbjct: 642  INTRNYIERQHLTDLVFVHCNLRLRQMFMSKEQDFS--DPLSFDNISNVEEWIRPRDLYI 699

Query: 361  GS--GDSDWMALHQPVANSTXXXXXXXXXXKLVAGFD 465
                G+SDWMAL     N+            L  G+D
Sbjct: 700  DDECGNSDWMALDPSSVNTMLLRPLNDEAEDLGEGYD 736


>ref|XP_002521049.1| DNA binding protein, putative [Ricinus communis]
            gi|223539752|gb|EEF41333.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 854

 Score =  137 bits (344), Expect = 4e-30
 Identities = 73/155 (47%), Positives = 93/155 (60%), Gaps = 1/155 (0%)
 Frame = +1

Query: 1    ATGDFGRKMAMRARQTLLPAEWWSTYGGSCPNLARLAIRILSQTCSARVCELRSFPFEQL 180
            A GD GRKMA+R+R TLLPAEWWSTYGG CPNLARLA+RILSQTCS+  C     PFE++
Sbjct: 688  AVGDLGRKMAIRSRGTLLPAEWWSTYGGGCPNLARLALRILSQTCSSIGCRSNHIPFEKV 747

Query: 181  HKSKNHLEHQRLCDLVFVXXXXXXXXXXXRKDRDSGQMDPISIDSIDLTEDWVTEKMGYF 360
            H ++N LE +R  DLVFV            + ++   +DPIS D+I + EDW+ +     
Sbjct: 748  HATRNCLEQKRRSDLVFVQCNLRLKEMVD-ESKNQVPLDPISFDNISIVEDWILQNDICL 806

Query: 361  GSGDS-DWMALHQPVANSTXXXXXXXXXXKLVAGF 462
               +S DWM+L  P AN+            L  GF
Sbjct: 807  EDYESADWMSLVPPSANNMPAGSAVDEIEDLGVGF 841


>ref|XP_003552872.1| PREDICTED: uncharacterized protein LOC100806265 [Glycine max]
          Length = 758

 Score =  136 bits (343), Expect = 6e-30
 Identities = 71/157 (45%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
 Frame = +1

Query: 1    ATGDFGRKMAMRARQTLLPAEWWSTYGGSCPNLARLAIRILSQTCSARVCELRSFPFEQL 180
            A GDFGRKMA+RAR  LLP+EWWSTYGG CPNL+RLAIRILSQT S   C+    PFEQ+
Sbjct: 581  AAGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMSCKRNQVPFEQI 640

Query: 181  HKSKNHLEHQRLCDLVFVXXXXXXXXXXXRKDRDSGQMDPISIDSIDLTEDWVTEKMGYF 360
              ++N++E Q L DLVFV            K+++    DP+S D++   E+W+  +  Y 
Sbjct: 641  INTRNYIERQHLTDLVFVHCNLRLRQMFMSKEQNFS--DPLSFDNVSNVEEWIRPRDLYV 698

Query: 361  GS--GDSDWMALHQPVANSTXXXXXXXXXXKLVAGFD 465
                G+SDWMAL     N+            L  G+D
Sbjct: 699  DDECGNSDWMALDPSSVNTMLLRPLNDETEDLGEGYD 735


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