BLASTX nr result

ID: Coptis21_contig00001152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001152
         (1553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22146.3| unnamed protein product [Vitis vinifera]              248   2e-63
ref|XP_002267296.1| PREDICTED: uncharacterized protein LOC100243...   248   2e-63
gb|ABK95689.1| unknown [Populus trichocarpa]                          232   2e-58
ref|XP_002509615.1| conserved hypothetical protein [Ricinus comm...   228   3e-57
ref|XP_002329852.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-56

>emb|CBI22146.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  248 bits (634), Expect = 2e-63
 Identities = 150/305 (49%), Positives = 178/305 (58%), Gaps = 10/305 (3%)
 Frame = -1

Query: 1277 DPFSNFGGFGG--QQRSLVSSMXXXXXXXXXXXXXXXXXXXXXXXXXPNMFGAPMPSMFG 1104
            DPF+ FG FGG    RSLVSS+                            F  P   MF 
Sbjct: 92   DPFAGFGSFGGFGGHRSLVSSVFGGRDPFDDP-----------------FFTQPFGGMFE 134

Query: 1103 GPSLFGES-------PAIGFIDNQGHPSQGNTTRGPVIEEILSXXXXXXXXXXXXXXXXN 945
              SLFG         P  GF++   H  Q   TRGP+IEE+ S                 
Sbjct: 135  S-SLFGSRGSPFMAMPGTGFLE---HQVQQPNTRGPIIEELNSDDEKEEEEKKDNP---- 186

Query: 944  TRKHSRSGGEVYVEEPDDGGVEERRIRHMQNRNEFSRMNNVT-QPQTRSFSFHSSKVTYG 768
             RKH RS  E YVE+ DD     R+ + MQ RNE++RM N   QPQ RSFSF SS VTYG
Sbjct: 187  -RKHRRSSKEPYVEDADDEA-SGRKSKQMQYRNEYNRMTNTQPQPQPRSFSFTSSTVTYG 244

Query: 767  GPNGAYYTSSTTRNIGDNGVMIEEKKEADLTTRKAEHRVSKGIRDKGHTVTRKLNPDGKV 588
            G NG YYTSSTTR  G +G+  EE KEAD TTR+A HRVS+GIR+KGH+VTRKLN DG+V
Sbjct: 245  GTNGPYYTSSTTRRTGSDGLTFEESKEADTTTRQAAHRVSRGIRNKGHSVTRKLNSDGQV 304

Query: 587  DTMQTLHNLDEDELAGFQETWKGNARKNLPGWTEGNDVYENIGPSSSTPQVQASRHGWAL 408
            DTMQ LHNL+E+EL+GF+E W+GNA+K LPGW E  +  +NIG  SS    QA+R GWAL
Sbjct: 305  DTMQALHNLNENELSGFEEAWQGNAKKYLPGWNERFNGLDNIGHGSSGQTGQANRGGWAL 364

Query: 407  PSVEQ 393
            PS E+
Sbjct: 365  PSTER 369


>ref|XP_002267296.1| PREDICTED: uncharacterized protein LOC100243132 [Vitis vinifera]
          Length = 329

 Score =  248 bits (634), Expect = 2e-63
 Identities = 150/305 (49%), Positives = 178/305 (58%), Gaps = 10/305 (3%)
 Frame = -1

Query: 1277 DPFSNFGGFGG--QQRSLVSSMXXXXXXXXXXXXXXXXXXXXXXXXXPNMFGAPMPSMFG 1104
            DPF+ FG FGG    RSLVSS+                            F  P   MF 
Sbjct: 14   DPFAGFGSFGGFGGHRSLVSSVFGGRDPFDDP-----------------FFTQPFGGMFE 56

Query: 1103 GPSLFGES-------PAIGFIDNQGHPSQGNTTRGPVIEEILSXXXXXXXXXXXXXXXXN 945
              SLFG         P  GF++   H  Q   TRGP+IEE+ S                 
Sbjct: 57   S-SLFGSRGSPFMAMPGTGFLE---HQVQQPNTRGPIIEELNSDDEKEEEEKKDNP---- 108

Query: 944  TRKHSRSGGEVYVEEPDDGGVEERRIRHMQNRNEFSRMNNVT-QPQTRSFSFHSSKVTYG 768
             RKH RS  E YVE+ DD     R+ + MQ RNE++RM N   QPQ RSFSF SS VTYG
Sbjct: 109  -RKHRRSSKEPYVEDADDEA-SGRKSKQMQYRNEYNRMTNTQPQPQPRSFSFTSSTVTYG 166

Query: 767  GPNGAYYTSSTTRNIGDNGVMIEEKKEADLTTRKAEHRVSKGIRDKGHTVTRKLNPDGKV 588
            G NG YYTSSTTR  G +G+  EE KEAD TTR+A HRVS+GIR+KGH+VTRKLN DG+V
Sbjct: 167  GTNGPYYTSSTTRRTGSDGLTFEESKEADTTTRQAAHRVSRGIRNKGHSVTRKLNSDGQV 226

Query: 587  DTMQTLHNLDEDELAGFQETWKGNARKNLPGWTEGNDVYENIGPSSSTPQVQASRHGWAL 408
            DTMQ LHNL+E+EL+GF+E W+GNA+K LPGW E  +  +NIG  SS    QA+R GWAL
Sbjct: 227  DTMQALHNLNENELSGFEEAWQGNAKKYLPGWNERFNGLDNIGHGSSGQTGQANRGGWAL 286

Query: 407  PSVEQ 393
            PS E+
Sbjct: 287  PSTER 291


>gb|ABK95689.1| unknown [Populus trichocarpa]
          Length = 372

 Score =  232 bits (591), Expect = 2e-58
 Identities = 128/256 (50%), Positives = 160/256 (62%), Gaps = 1/256 (0%)
 Frame = -1

Query: 1139 NMFGAPMPSMFGGPSLFGESPAIGFIDNQGHPSQGNTTRGPVIEEILSXXXXXXXXXXXX 960
            NM  +P P+M   PS F      GF D+Q    +   +RGP+IEE+ S            
Sbjct: 89   NMLPSPFPNMH--PSPFPNLHPSGFADHQA--PELKKSRGPIIEELDSDNEKGEGDREKK 144

Query: 959  XXXXNTRKHSRSGGEVYVEEPDDGGVEERRIRHMQNRNEFSRMNNV-TQPQTRSFSFHSS 783
                  RKH RS  E YVE+PDD   E R+ +H+Q  N++S  N + +QPQ RSF+F SS
Sbjct: 145  ENP---RKHGRSSKEPYVEDPDDEA-EARKSKHLQYSNDYSSFNGMESQPQGRSFTFQSS 200

Query: 782  KVTYGGPNGAYYTSSTTRNIGDNGVMIEEKKEADLTTRKAEHRVSKGIRDKGHTVTRKLN 603
             VT+GG NGAYYTSS TR  G +G+  EE K AD  T +A H+VS+G+ +KGH++TRKLN
Sbjct: 201  TVTHGGANGAYYTSSKTRRAGSDGLTFEESKAADSATGQATHKVSRGLHNKGHSLTRKLN 260

Query: 602  PDGKVDTMQTLHNLDEDELAGFQETWKGNARKNLPGWTEGNDVYENIGPSSSTPQVQASR 423
             DG+V+TMQ LHNL+EDEL GF+E WKGNA K+LPGWT      +NIG S S    QASR
Sbjct: 261  SDGRVNTMQMLHNLNEDELTGFEEAWKGNAGKHLPGWTGSFTGIDNIGASRSGQNTQASR 320

Query: 422  HGWALPSVEQPSAPNR 375
             GWALPS EQ     R
Sbjct: 321  GGWALPSAEQSQHSGR 336


>ref|XP_002509615.1| conserved hypothetical protein [Ricinus communis]
            gi|223549514|gb|EEF51002.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 342

 Score =  228 bits (582), Expect = 3e-57
 Identities = 137/299 (45%), Positives = 173/299 (57%), Gaps = 5/299 (1%)
 Frame = -1

Query: 1277 DPFSNFG----GFGGQQRSLVSSMXXXXXXXXXXXXXXXXXXXXXXXXXPNMFGAPMPSM 1110
            DPF+ FG    GFGG  RSL+S                            +  G+P+ SM
Sbjct: 16   DPFAGFGGFGRGFGGVHRSLMSGFFGGRDPFDDPFFTRPFGGMFESSFFGSN-GSPLASM 74

Query: 1109 FGGPSLFGESPAIGFIDNQGHPSQGNTTRGPVIEEILSXXXXXXXXXXXXXXXXNTRKHS 930
               P          F+++Q      N +RGP+IEE+ S                N RKH 
Sbjct: 75   HPSP----------FVEHQALEPPRN-SRGPIIEELNS---DDDKEEADKGKKENPRKHG 120

Query: 929  RSGGEVYVEEPDDGGVEERRIRHMQNRNEFSRMNNV-TQPQTRSFSFHSSKVTYGGPNGA 753
            R   E YVE+PDD   EER+ +H+Q R+  +R N +  QPQTRSF+F SS VTYGG NGA
Sbjct: 121  RPSKEPYVEDPDD-EAEERKSKHLQYRSSHNRFNGMEQQPQTRSFTFQSSTVTYGGANGA 179

Query: 752  YYTSSTTRNIGDNGVMIEEKKEADLTTRKAEHRVSKGIRDKGHTVTRKLNPDGKVDTMQT 573
            YYTSS +R  G +G+ +EE KEAD +TRKA HR+S+G+ +KGHT+TR LN DGKV+TMQT
Sbjct: 180  YYTSSKSRRAGSDGLTVEESKEADTSTRKASHRISRGLHNKGHTLTRNLNSDGKVETMQT 239

Query: 572  LHNLDEDELAGFQETWKGNARKNLPGWTEGNDVYENIGPSSSTPQVQASRHGWALPSVE 396
            LHNL EDELA F E WK NAR+ LPGWT     ++++G SSS     AS  GWALP+ E
Sbjct: 240  LHNLHEDELADFGEVWKQNARQALPGWTGNFSGHDSMGASSSGR--NASMGGWALPATE 296


>ref|XP_002329852.1| predicted protein [Populus trichocarpa] gi|222871089|gb|EEF08220.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  226 bits (576), Expect = 1e-56
 Identities = 128/258 (49%), Positives = 160/258 (62%), Gaps = 3/258 (1%)
 Frame = -1

Query: 1139 NMFGAPMPSMFGGPSLFGESPAIGFIDNQGHPSQGNTTRGPVIEEILSXXXXXXXXXXXX 960
            NM  +P P+M   PS F      GF D+Q    +   +RGP+IEE+ S            
Sbjct: 89   NMLPSPFPNMH--PSPFPNLHPSGFADHQA--PELKKSRGPIIEELDSDNEKGEGDREKK 144

Query: 959  XXXXNTRKHSRSGGEVYVEEPDDGGVEERRIRHMQNRNEFSRMNNV-TQPQTRSFSFHSS 783
                  RKH RS  E YVE+PDD   E R+ +H+Q  N++S  N + +QPQ RSF+F SS
Sbjct: 145  ENP---RKHGRSTKEPYVEDPDDEA-EARKSKHLQYSNDYSSFNGMESQPQGRSFTFQSS 200

Query: 782  KVTYGGPNGAYYTSSTTRNIGDNGVMIEEKKEADLTTRKAEHRVSKGIRDKGHTVTRKLN 603
             VT+GG NGAYYTSS TR  G +G+  EE K AD  T +A H+VS+G+ +KGH++TRKLN
Sbjct: 201  TVTHGGANGAYYTSSKTRRAGSDGLTFEESKAADSATGQATHKVSRGLHNKGHSLTRKLN 260

Query: 602  PDGKVDTMQTLHNLDEDELAGFQETWKGNARKNLPGWTEGNDVYENI--GPSSSTPQVQA 429
             DG+V+TMQ LHNL+EDEL GF+E WKGNA K+LPGWT      +NI  G S S    QA
Sbjct: 261  SDGRVNTMQMLHNLNEDELTGFEEAWKGNAGKHLPGWTGSFTGIDNIGTGASRSGQNTQA 320

Query: 428  SRHGWALPSVEQPSAPNR 375
            SR GWALPS EQ     R
Sbjct: 321  SRGGWALPSAEQSQHSGR 338


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