BLASTX nr result

ID: Coptis21_contig00001149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001149
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW78548.1| protein translation factor SUI1 [Zea mays]             184   1e-44
ref|XP_004152930.1| PREDICTED: protein translation factor SUI1 h...   183   4e-44
gb|EEC79466.1| hypothetical protein OsI_20483 [Oryza sativa Indi...   182   5e-44
ref|XP_003532130.1| PREDICTED: protein translation factor SUI1 h...   179   4e-43
gb|EEE67305.1| hypothetical protein OsJ_24532 [Oryza sativa Japo...   179   7e-43

>gb|AFW78548.1| protein translation factor SUI1 [Zea mays]
          Length = 185

 Score =  184 bits (468), Expect = 1e-44
 Identities = 93/122 (76%), Positives = 105/122 (86%), Gaps = 3/122 (2%)
 Frame = -3

Query: 552 KVNQQSFMVDVDVQLPTAFDPFAEAEAL---SGPGTKEYVHIRIQQRNGKKTLTTVQGLK 382
           K  Q SFM D+DVQLP+AFDPFAEA A    +GPGTK+YVH+RIQQRNG+K+LTTVQGLK
Sbjct: 64  KPQQPSFMSDLDVQLPSAFDPFAEANAEDSGAGPGTKDYVHVRIQQRNGRKSLTTVQGLK 123

Query: 381 TELSYDKILKDLKKGFCCNGTVVQDATLGKVIQLQGDQRKNVADFLVKARILKKDSIKIH 202
            E SY+KILKDLKK FCCNGTVVQD  LG+VIQLQGDQRKNVA FLV+A I KK++IKIH
Sbjct: 124 KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKENIKIH 183

Query: 201 GF 196
           GF
Sbjct: 184 GF 185


>ref|XP_004152930.1| PREDICTED: protein translation factor SUI1 homolog 2-like [Cucumis
           sativus] gi|449523439|ref|XP_004168731.1| PREDICTED:
           protein translation factor SUI1 homolog 2-like [Cucumis
           sativus]
          Length = 112

 Score =  183 bits (464), Expect = 4e-44
 Identities = 87/112 (77%), Positives = 98/112 (87%)
 Frame = -3

Query: 531 MVDVDVQLPTAFDPFAEAEALSGPGTKEYVHIRIQQRNGKKTLTTVQGLKTELSYDKILK 352
           MVD+DVQ+P+AFDPFA+A+    PGTKEYVHIR+QQRNGKK LTTVQGLK E SYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 351 DLKKGFCCNGTVVQDATLGKVIQLQGDQRKNVADFLVKARILKKDSIKIHGF 196
           DLKK FCCNG VVQD  LGK+IQLQGDQRKNV+ FLV+A ++KKD IKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112


>gb|EEC79466.1| hypothetical protein OsI_20483 [Oryza sativa Indica Group]
           gi|222632108|gb|EEE64240.1| hypothetical protein
           OsJ_19073 [Oryza sativa Japonica Group]
          Length = 213

 Score =  182 bits (463), Expect = 5e-44
 Identities = 92/119 (77%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
 Frame = -3

Query: 543 QQSFMVDVDVQLPTAFDPFAEAEAL---SGPGTKEYVHIRIQQRNGKKTLTTVQGLKTEL 373
           Q SFM D+DVQLP+AFDPFAEA A    +GPG K+YVH+RIQQRNG+K+LTTVQGLK E 
Sbjct: 95  QTSFMSDLDVQLPSAFDPFAEANAEDSGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEY 154

Query: 372 SYDKILKDLKKGFCCNGTVVQDATLGKVIQLQGDQRKNVADFLVKARILKKDSIKIHGF 196
           SY+KILKDLKK FCCNGTVVQD  LG+VIQLQGDQRKNVA FLV+A I KKD+IKIHGF
Sbjct: 155 SYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKDNIKIHGF 213


>ref|XP_003532130.1| PREDICTED: protein translation factor SUI1 homolog 2-like [Glycine
           max]
          Length = 112

 Score =  179 bits (455), Expect = 4e-43
 Identities = 84/112 (75%), Positives = 98/112 (87%)
 Frame = -3

Query: 531 MVDVDVQLPTAFDPFAEAEALSGPGTKEYVHIRIQQRNGKKTLTTVQGLKTELSYDKILK 352
           MVD+++Q+P+AFDPFAEA     PG KEYVHIRIQQRNGKK+LTTVQGLK E SY+KILK
Sbjct: 1   MVDLEIQVPSAFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILK 60

Query: 351 DLKKGFCCNGTVVQDATLGKVIQLQGDQRKNVADFLVKARILKKDSIKIHGF 196
           DLKK FCCNGTVVQD  LGK+IQLQGDQRKNV+ FLV+A +++KD +KIHGF
Sbjct: 61  DLKKDFCCNGTVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDQVKIHGF 112


>gb|EEE67305.1| hypothetical protein OsJ_24532 [Oryza sativa Japonica Group]
          Length = 230

 Score =  179 bits (453), Expect = 7e-43
 Identities = 88/120 (73%), Positives = 105/120 (87%), Gaps = 3/120 (2%)
 Frame = -3

Query: 546 NQQSFMVDVDVQLPTAFDPFAEAEAL---SGPGTKEYVHIRIQQRNGKKTLTTVQGLKTE 376
           +QQSFM D+D+Q+PTAFDPFAEA A    +  G+K+YVH+RIQQRNG+K+LTTVQGLK E
Sbjct: 111 HQQSFMSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKE 170

Query: 375 LSYDKILKDLKKGFCCNGTVVQDATLGKVIQLQGDQRKNVADFLVKARILKKDSIKIHGF 196
            SY+KILKDLKK FCCNGTVVQD  LG+VIQLQGDQRKNV++FLV+A I+KK+ IKIHGF
Sbjct: 171 FSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 230


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