BLASTX nr result

ID: Coptis21_contig00001146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001146
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS50249.1| GAI-like gibberellin response modulator [Morus al...    74   9e-12
gb|ABL97888.1| GAI-like protein 1 [Cissus striata subsp. argenti...    74   9e-12
gb|ABL97886.1| GAI-like protein 1 [Cissus striata]                     74   9e-12
gb|ABL97892.1| GAI-like protein 1 [Cissus striata subsp. argentina]    74   9e-12
gb|ABL97890.1| GAI-like protein 1 [Cissus striata subsp. argentina]    74   9e-12

>gb|ABS50249.1| GAI-like gibberellin response modulator [Morus alba var.
           multicaulis]
          Length = 267

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 47/97 (48%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
 Frame = +1

Query: 22  LAPSSNHPITDDTELASISPSVSMYDDLRAIPGNAICSATPNE------ELEPERKRLKP 183
           LAP+ +  IT          SV    DL+AIPG AI S TPN           E KRLKP
Sbjct: 74  LAPAESSTIT----------SVDYDYDLKAIPGKAIYSQTPNNLDSSSSSTTRESKRLKP 123

Query: 184 SVKMGLGSVTESTQPVVLVDSQETGIRLVHTLLACAE 294
           S  +   + T+S +P+VLVDSQE GIRLVH L+ACAE
Sbjct: 124 SNDVVSTAATDSNRPIVLVDSQENGIRLVHALMACAE 160


>gb|ABL97888.1| GAI-like protein 1 [Cissus striata subsp. argentina]
           gi|119713892|gb|ABL97889.1| GAI-like protein 1 [Cissus
           striata subsp. argentina]
          Length = 220

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 54/122 (44%), Positives = 62/122 (50%), Gaps = 28/122 (22%)
 Frame = +1

Query: 13  NPTLAPSSNHPI----------TDDTELASISPSVSMYDDLRAIPGNAICSATPNEELEP 162
           NP L P S  P           T   +  S+  S S+  DL+AIPG A+ S       +P
Sbjct: 51  NPFLPPISQSPAISPLDYTNCSTQPKQEPSLFDSPSLDYDLKAIPGKALYSHIEQPPQQP 110

Query: 163 --------ERKRLKP----------SVKMGLGSVTESTQPVVLVDSQETGIRLVHTLLAC 288
                   E KRLKP          SV  G G  TES +PVVLVDSQETGIRLVHTL+AC
Sbjct: 111 PPPPLYQRENKRLKPTTSATATSVSSVIGGWGVPTESARPVVLVDSQETGIRLVHTLMAC 170

Query: 289 AE 294
           AE
Sbjct: 171 AE 172


>gb|ABL97886.1| GAI-like protein 1 [Cissus striata]
          Length = 502

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 54/122 (44%), Positives = 62/122 (50%), Gaps = 28/122 (22%)
 Frame = +1

Query: 13  NPTLAPSSNHPI----------TDDTELASISPSVSMYDDLRAIPGNAICSATPNEELEP 162
           NP L P S  P           T   +  S+  S S+  DL+AIPG A+ S       +P
Sbjct: 61  NPFLPPISQSPAISPLDYTNCSTQPKQEPSLFDSPSLDYDLKAIPGKALYSHIEQPPQQP 120

Query: 163 --------ERKRLKP----------SVKMGLGSVTESTQPVVLVDSQETGIRLVHTLLAC 288
                   E KRLKP          SV  G G  TES +PVVLVDSQETGIRLVHTL+AC
Sbjct: 121 PPPPLYQRENKRLKPTTSATATSVSSVIGGWGVPTESARPVVLVDSQETGIRLVHTLMAC 180

Query: 289 AE 294
           AE
Sbjct: 181 AE 182


>gb|ABL97892.1| GAI-like protein 1 [Cissus striata subsp. argentina]
          Length = 224

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 54/122 (44%), Positives = 62/122 (50%), Gaps = 28/122 (22%)
 Frame = +1

Query: 13  NPTLAPSSNHPI----------TDDTELASISPSVSMYDDLRAIPGNAICSATPNEELEP 162
           NP L P S  P           T   +  S+  S S+  DL+AIPG A+ S       +P
Sbjct: 55  NPFLPPISQSPAISPLDYTNCSTQPKQEPSLFDSPSLDYDLKAIPGKALYSHIEQPPQQP 114

Query: 163 --------ERKRLKP----------SVKMGLGSVTESTQPVVLVDSQETGIRLVHTLLAC 288
                   E KRLKP          SV  G G  TES +PVVLVDSQETGIRLVHTL+AC
Sbjct: 115 PPPPLYQRENKRLKPTTSATATSVSSVIGGWGVPTESARPVVLVDSQETGIRLVHTLMAC 174

Query: 289 AE 294
           AE
Sbjct: 175 AE 176


>gb|ABL97890.1| GAI-like protein 1 [Cissus striata subsp. argentina]
          Length = 220

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 54/122 (44%), Positives = 62/122 (50%), Gaps = 28/122 (22%)
 Frame = +1

Query: 13  NPTLAPSSNHPI----------TDDTELASISPSVSMYDDLRAIPGNAICSATPNEELEP 162
           NP L P S  P           T   +  S+  S S+  DL+AIPG A+ S       +P
Sbjct: 51  NPFLPPISQSPAISPLDYTNCSTQPKQEPSLFDSPSLDYDLKAIPGKALYSHIEQPPQQP 110

Query: 163 --------ERKRLKP----------SVKMGLGSVTESTQPVVLVDSQETGIRLVHTLLAC 288
                   E KRLKP          SV  G G  TES +PVVLVDSQETGIRLVHTL+AC
Sbjct: 111 PPPPLYQRENKRLKPTTSATATSVSSVIGGWGVPTESARPVVLVDSQETGIRLVHTLMAC 170

Query: 289 AE 294
           AE
Sbjct: 171 AE 172


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