BLASTX nr result

ID: Coptis21_contig00001142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001142
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279930.1| PREDICTED: uncharacterized protein LOC100248...   401   e-109
emb|CBI15987.3| unnamed protein product [Vitis vinifera]              395   e-107
ref|XP_002525610.1| conserved hypothetical protein [Ricinus comm...   395   e-107
ref|XP_002314116.1| predicted protein [Populus trichocarpa] gi|2...   382   e-103
ref|XP_002299819.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101

>ref|XP_002279930.1| PREDICTED: uncharacterized protein LOC100248366 isoform 1 [Vitis
            vinifera]
          Length = 386

 Score =  401 bits (1031), Expect = e-109
 Identities = 223/377 (59%), Positives = 255/377 (67%), Gaps = 10/377 (2%)
 Frame = -2

Query: 1252 HLGCFFISTTN-ERTSSKKRKVTPDSHSISSTYHSKLHKPLIXXXXXXXXXXSYLKKIXX 1076
            HLGCF  +  + +R  S+KRKV+P S    S   S+                 YLKKI  
Sbjct: 22   HLGCFMFTVEDGDRRPSRKRKVSPVSSHHLSPMDSRSRS-----RNALSSSWFYLKKIFA 76

Query: 1075 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLVSVPTPADTRTSTPSRKRRNLSM--SD 902
                                           S+VSV  P     S P RK    +   SD
Sbjct: 77   SKPCTASMDTQPATATVSSARSSL------HSVVSVVLPEMMVVSDPQRKVPTATRPESD 130

Query: 901  ISMDHQSFPLRNDIFPCPTCGEIFHKTQLLENHQSVKHAVSELYDGDSGKNIVKIIFKTS 722
            IS DHQ FPLRNDIFPCP CGE+F K Q LE HQ++KHAVSEL DGDSG NIV+IIFKT 
Sbjct: 131  ISADHQFFPLRNDIFPCPACGEVFQKPQNLEQHQALKHAVSELIDGDSGNNIVRIIFKTG 190

Query: 721  WNDKEMKNPVIHRILKIHNSAKILAKFEEYREFVKSKAVN---ARRREERCIADGNELLR 551
            W D E K P I RILKIHNS+KILA+FEEYRE VKSKA      RRR+ERCIADGNELLR
Sbjct: 191  WTDSE-KIPKIQRILKIHNSSKILARFEEYRESVKSKAARNGAVRRRDERCIADGNELLR 249

Query: 550  FHCSTFICNLGQNGNSSLCSQQYCSVCGIIRSGFSGKIDGISTMSSSWKAHVAIPEDLEE 371
            FHCSTF+CNLGQNGNSS+C+ QYCSVCGIIR+GFS K+DGIST+S+SW+AH  IPED+E+
Sbjct: 250  FHCSTFLCNLGQNGNSSVCNHQYCSVCGIIRTGFSPKLDGISTLSTSWRAHATIPEDIED 309

Query: 370  EFAFMNVKRAMLVCRVVAGRIGSDQEVVDTDESSFDSVVGR---GHGGSQFR-SEEDELL 203
            EF FMNVKRAMLVCRVVAGRIGSDQ+ VD ++  FDSVVGR   G GGS  R  +++ELL
Sbjct: 310  EFRFMNVKRAMLVCRVVAGRIGSDQDEVDKEDGGFDSVVGRSAIGGGGSLTRLVDDEELL 369

Query: 202  VFNPRAVLPCFAIVYSV 152
            VFNPR+VLPCF IVYSV
Sbjct: 370  VFNPRSVLPCFVIVYSV 386


>emb|CBI15987.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  395 bits (1015), Expect = e-107
 Identities = 203/286 (70%), Positives = 229/286 (80%), Gaps = 9/286 (3%)
 Frame = -2

Query: 982 SLVSVPTPADTRTSTPSRKRRNLSM--SDISMDHQSFPLRNDIFPCPTCGEIFHKTQLLE 809
           S+VSV  P     S P RK    +   SDIS DHQ FPLRNDIFPCP CGE+F K Q LE
Sbjct: 49  SVVSVVLPEMMVVSDPQRKVPTATRPESDISADHQFFPLRNDIFPCPACGEVFQKPQNLE 108

Query: 808 NHQSVKHAVSELYDGDSGKNIVKIIFKTSWNDKEMKNPVIHRILKIHNSAKILAKFEEYR 629
            HQ++KHAVSEL DGDSG NIV+IIFKT W D E K P I RILKIHNS+KILA+FEEYR
Sbjct: 109 QHQALKHAVSELIDGDSGNNIVRIIFKTGWTDSE-KIPKIQRILKIHNSSKILARFEEYR 167

Query: 628 EFVKSKAVN---ARRREERCIADGNELLRFHCSTFICNLGQNGNSSLCSQQYCSVCGIIR 458
           E VKSKA      RRR+ERCIADGNELLRFHCSTF+CNLGQNGNSS+C+ QYCSVCGIIR
Sbjct: 168 ESVKSKAARNGAVRRRDERCIADGNELLRFHCSTFLCNLGQNGNSSVCNHQYCSVCGIIR 227

Query: 457 SGFSGKIDGISTMSSSWKAHVAIPEDLEEEFAFMNVKRAMLVCRVVAGRIGSDQEVVDTD 278
           +GFS K+DGIST+S+SW+AH  IPED+E+EF FMNVKRAMLVCRVVAGRIGSDQ+ VD +
Sbjct: 228 TGFSPKLDGISTLSTSWRAHATIPEDIEDEFRFMNVKRAMLVCRVVAGRIGSDQDEVDKE 287

Query: 277 ESSFDSVVGR---GHGGSQFR-SEEDELLVFNPRAVLPCFAIVYSV 152
           +  FDSVVGR   G GGS  R  +++ELLVFNPR+VLPCF IVYSV
Sbjct: 288 DGGFDSVVGRSAIGGGGSLTRLVDDEELLVFNPRSVLPCFVIVYSV 333


>ref|XP_002525610.1| conserved hypothetical protein [Ricinus communis]
            gi|223535046|gb|EEF36728.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 448

 Score =  395 bits (1014), Expect = e-107
 Identities = 223/384 (58%), Positives = 263/384 (68%), Gaps = 17/384 (4%)
 Frame = -2

Query: 1252 HLGCF-FISTTNERTSSKKRKVTPDSHSISSTYHSKL---HKPLIXXXXXXXXXXSYLKK 1085
            HLGCF F +    +  ++KRK +P   S SS+  S+L   HK L           SYLK+
Sbjct: 79   HLGCFTFTAKDQHQPPTRKRKASPPPSSSSSSSPSRLRVSHKAL-------SSSWSYLKR 131

Query: 1084 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLVSVPTPADTRTS---TPSRKRRNL 914
            I                                 S+V+V  P +       TP RK+ + 
Sbjct: 132  IFSSKAHKPISQAQSPAPTLASARSSQ------HSIVTVAVPQEDHQVSDITPPRKKPSG 185

Query: 913  SM--SDISMDH-QSFPLRNDIFPCPTCGEIFHKTQLLENHQSVKHAVSELYDGDSGKNIV 743
            S   SDIS  + Q FPLRNDIFPC  CGEIF K QLLE HQ++KHAVSEL DGDSGKNIV
Sbjct: 186  SCQESDISTSNDQFFPLRNDIFPCTACGEIFQKPQLLEQHQAIKHAVSELVDGDSGKNIV 245

Query: 742  KIIFKTSWNDKEMKNPVIHRILKIHNSAKILAKFEEYREFVKSKAVN----ARRREERCI 575
             IIFKT W+ K+ KNP IHRILKIHNS KIL++FEEYRE VK+KA       +RR+ERCI
Sbjct: 246  HIIFKTGWSCKD-KNPEIHRILKIHNSPKILSRFEEYRELVKAKAARNSSTIKRRDERCI 304

Query: 574  ADGNELLRFHCSTFICNLGQNGNSSLCSQQYCSVCGIIRSGFSGKIDGISTMSSSWKAHV 395
            ADGNELLRF+CSTF+C+LG NGNSS+CSQQYCSVCGII+SGFS K+DGIST+SSSW+AHV
Sbjct: 305  ADGNELLRFYCSTFMCDLGVNGNSSICSQQYCSVCGIIKSGFSPKLDGISTLSSSWRAHV 364

Query: 394  AIPEDLEEEFAFMNVKRAMLVCRVVAGRIGSDQEV---VDTDESSFDSVVGRGHGGSQFR 224
            A+PED+EEEF FMNVKRAMLVCRVVAGR+G + EV   V+ ++  FDSVVGRG  G   R
Sbjct: 365  AVPEDIEEEFRFMNVKRAMLVCRVVAGRVGCEMEVEEEVNKEDGGFDSVVGRGGSGVHTR 424

Query: 223  SEEDELLVFNPRAVLPCFAIVYSV 152
             +E+ELLVFNPRAVLPCF IVYSV
Sbjct: 425  LDEEELLVFNPRAVLPCFVIVYSV 448


>ref|XP_002314116.1| predicted protein [Populus trichocarpa] gi|222850524|gb|EEE88071.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  382 bits (981), Expect = e-103
 Identities = 211/378 (55%), Positives = 255/378 (67%), Gaps = 11/378 (2%)
 Frame = -2

Query: 1252 HLGCFFIST-------TNERTSSKKRKVTPDSHSISSTYHSKLHKPLIXXXXXXXXXXSY 1094
            HLGCF  +T        +   + K++KV+P +   SS    K HK L           SY
Sbjct: 21   HLGCFIFTTKLDDHHPNSPPPTKKRKKVSPLAPISSSPSRLKSHKAL-------SSSWSY 73

Query: 1093 LKKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLVSVPTPADTRTSTPSRKRRNL 914
            LK I                                +S+V    P       P RK+ + 
Sbjct: 74   LKSIFSSKSSKTQTQSGTPTLTSARSSQ--------QSIVPTIPPETHLPELPPRKKSSG 125

Query: 913  SM--SDISMDHQSFPLRNDIFPCPTCGEIFHKTQLLENHQSVKHAVSELYDGDSGKNIVK 740
            S   SDIS DH  FPLRNDIFPC  CGEIF K QLLE HQ+ KHAV++L DGDSGKNIV 
Sbjct: 126  SCEESDISTDHHFFPLRNDIFPCTACGEIFQKPQLLEQHQATKHAVTQLLDGDSGKNIVH 185

Query: 739  IIFKTSWNDKEMKNPVIHRILKIHNSAKILAKFEEYREFVKSKAV-NARRREERCIADGN 563
            IIFKT W+ KE K+P IHRILKIHNS KIL++FEEYREFV++KA  N++R +ERCIADGN
Sbjct: 186  IIFKTGWSCKE-KSPEIHRILKIHNSPKILSRFEEYREFVRAKAARNSKRGDERCIADGN 244

Query: 562  ELLRFHCSTFICNLGQNGNSSLCSQQYCSVCGIIRSGFSGKIDGISTMSSSWKAHVAIPE 383
            ELLRF+CSTF+C+LG N +SS+C+QQYCSVCGII+SGFS K+DGIST+S+SW+AH+AIPE
Sbjct: 245  ELLRFYCSTFMCDLGLNEDSSICNQQYCSVCGIIKSGFSPKMDGISTLSTSWRAHMAIPE 304

Query: 382  DLEEEFAFMNVKRAMLVCRVVAGRIGSD-QEVVDTDESSFDSVVGRGHGGSQFRSEEDEL 206
            ++EEEF FMNVKRAMLVCRVVAGR+G D +E VD  +   DSV+GRG  G   R +E+EL
Sbjct: 305  EIEEEFKFMNVKRAMLVCRVVAGRVGCDLEEDVDKQDGGSDSVLGRGGSGVHTRLDEEEL 364

Query: 205  LVFNPRAVLPCFAIVYSV 152
            LVFNPRAVLPCF IVY+V
Sbjct: 365  LVFNPRAVLPCFVIVYTV 382


>ref|XP_002299819.1| predicted protein [Populus trichocarpa] gi|222847077|gb|EEE84624.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  374 bits (961), Expect = e-101
 Identities = 187/268 (69%), Positives = 219/268 (81%), Gaps = 6/268 (2%)
 Frame = -2

Query: 937 PSRKRRNLSMS--DISMDHQSFPLRNDIFPCPTCGEIFHKTQLLENHQSVKHAVSELYDG 764
           P RK+   S    DIS DHQ FPLRNDIFPC  CGE+F K QLLE HQ++KHAV++L DG
Sbjct: 13  PPRKKSTGSCEEPDISTDHQFFPLRNDIFPCTACGEVFQKPQLLEQHQAIKHAVTQLLDG 72

Query: 763 DSGKNIVKIIFKTSWNDKEMKNPVIHRILKIHNSAKILAKFEEYREFVKSKAVN---ARR 593
           DSGKNIV IIFKT W+ KE K+P I RILKIHNS KIL++FEEYREFVK+KA      +R
Sbjct: 73  DSGKNIVDIIFKTGWSCKE-KSPEIRRILKIHNSPKILSRFEEYREFVKTKAARNSPIKR 131

Query: 592 REERCIADGNELLRFHCSTFICNLGQNGNSSLCSQQYCSVCGIIRSGFSGKIDGISTMSS 413
           R+ERCIADGNELLRF CSTF+C+LG NG+SS+C+QQYCSVCGII+SGFS K+DGIST+S+
Sbjct: 132 RDERCIADGNELLRFFCSTFMCDLGLNGDSSICNQQYCSVCGIIKSGFSPKMDGISTLST 191

Query: 412 SWKAHVAIPEDLEEEFAFMNVKRAMLVCRVVAGRIGSD-QEVVDTDESSFDSVVGRGHGG 236
           SW+AH+A PE++EEEF FMNVKRAMLVCRVVAGRIG D  E +D  +S  DSV+GRG  G
Sbjct: 192 SWRAHMAFPEEIEEEFKFMNVKRAMLVCRVVAGRIGCDLDEDIDKQDSGSDSVLGRGGSG 251

Query: 235 SQFRSEEDELLVFNPRAVLPCFAIVYSV 152
              R +E+ELLVFNPRAVLPCF IVY+V
Sbjct: 252 IHTRVDEEELLVFNPRAVLPCFVIVYTV 279


Top