BLASTX nr result

ID: Coptis21_contig00001139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001139
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267795.1| PREDICTED: putative disease resistance prote...   316   6e-84
ref|XP_003632842.1| PREDICTED: putative disease resistance prote...   306   4e-81
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...   303   4e-80
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...   301   2e-79
ref|XP_002268266.2| PREDICTED: putative disease resistance prote...   299   9e-79

>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 928

 Score =  316 bits (810), Expect = 6e-84
 Identities = 167/360 (46%), Positives = 239/360 (66%), Gaps = 5/360 (1%)
 Frame = -1

Query: 1072 ELQNLETKLHLVKAVLEDAEKKEIHDSAVKVWLGQLKDVMYDAEDVLDEWNTRIL---IS 902
            E+ NL++ L  ++AVL DAEK++  +  VKVWL +LKD+ Y  +DV+D W+T +L   I+
Sbjct: 34   EVDNLKSTLQSIRAVLGDAEKRQFTEELVKVWLERLKDISYQMDDVVDGWSTALLKLQIA 93

Query: 901  ANGPHVAN-RVRSYLLSLCACFRHVGVRHGIAHRIKGIVKRLDGIARNKDPLSLVQSHSH 725
            A  P +   ++ S L S C CF+ V +RH IA +IK I K+L+ IA  ++  + V S   
Sbjct: 94   AENPGIPKPKISSCLPSPCVCFKQVSLRHDIALQIKDIKKQLNAIANERNQFNFVSSSII 153

Query: 724  GEP-RQLTSSVVDVSVICGRDLDKQSILSRLLCETSQQETQVCIPILSIVGTGGFGKTTL 548
             +P R++TSSV+DVS  CGRD D   I+ +LL  + Q+ + + I  +SIVG GG GKTTL
Sbjct: 154  QQPHRRITSSVIDVSQFCGRDADINIIIGKLLGGSCQESSSLYI--VSIVGMGGIGKTTL 211

Query: 547  AQLVYNEGTIATTFELKIWVCVSEPFDLERVAREIIEQATGGKPPNVVGWEPLHQLLCNS 368
            AQL YN   + + F  ++WVCVS+PFD  R++R I+E A   K       E + Q +C  
Sbjct: 212  AQLAYNHEKVKSYFHERMWVCVSDPFDPMRISRAILE-ALQKKSSGFHDLEAVQQKICTL 270

Query: 367  LKGKRFLLMLDDVWTEDSNYWELLKLSLDGGERGSKIIVTTRNEAVAIMIGSIYIHRLAQ 188
            +  ++FLL+LDDVWTE+   WE ++ SL GG  GS+I+VTTRNE V+ M+G+ Y H L +
Sbjct: 271  IADEKFLLVLDDVWTENYELWEQVESSLKGGAPGSRILVTTRNENVSTMMGTTYKHPLGE 330

Query: 187  LSDDDCWDLFRHIAFWGRTQQEQERLKGIGQEIAKKCKGVPLAVKTLASLMRFKRAKEDW 8
            LS + CW LF +IAF+GR++++ E L+ IG++IA KC+G+PLA K L SLMR K  KEDW
Sbjct: 331  LSKEQCWSLFSNIAFYGRSREKVEELENIGRKIADKCRGLPLAAKVLGSLMRLKDNKEDW 390


>ref|XP_003632842.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 1006

 Score =  306 bits (785), Expect = 4e-81
 Identities = 164/360 (45%), Positives = 235/360 (65%), Gaps = 5/360 (1%)
 Frame = -1

Query: 1072 ELQNLETKLHLVKAVLEDAEKKEIHDSAVKVWLGQLKDVMYDAEDVLDEWNTRIL---IS 902
            E+ NL + L  ++AVL DAEK++  +  VKVWL +LKD+ Y  +DV+D WNT +L   I 
Sbjct: 30   EVDNLNSTLQSIRAVLADAEKRQFSEELVKVWLERLKDISYQMDDVVDGWNTALLKLQIG 89

Query: 901  ANGPHVAN-RVRSYLLSLCACFRHVGVRHGIAHRIKGIVKRLDGIARNKDPLSLVQSHSH 725
            A  P +   ++ S L S C CF+ V +R  I  +IK I K+LD IA  ++  + V S + 
Sbjct: 90   AENPCIPKLKISSCLPSPCVCFKQVLLRCDIGIKIKDIRKQLDAIANERNQFNFVSSSTI 149

Query: 724  GEP-RQLTSSVVDVSVICGRDLDKQSILSRLLCETSQQETQVCIPILSIVGTGGFGKTTL 548
             +P R++TSSV+DVS  CGRD D   I+ +LL  +SQ+ + + I  +SIVG GG GKTTL
Sbjct: 150  QQPHRRMTSSVIDVSQFCGRDADMDVIIDKLLGGSSQESSSLYI--ISIVGMGGIGKTTL 207

Query: 547  AQLVYNEGTIATTFELKIWVCVSEPFDLERVAREIIEQATGGKPPNVVGWEPLHQLLCNS 368
            AQL YN+  +   F  ++WVCVS+PFD   ++R I+E A   +  +    E + Q +C  
Sbjct: 208  AQLAYNDDRVKAYFHERMWVCVSDPFDPVTISRAILE-ALQKESCDFHELENVEQKICTL 266

Query: 367  LKGKRFLLMLDDVWTEDSNYWELLKLSLDGGERGSKIIVTTRNEAVAIMIGSIYIHRLAQ 188
            +  K+FLL+LDDVWTE+   WE ++ SL GG  GS+I+VTTR + V+ M+G+ Y H L +
Sbjct: 267  IADKKFLLVLDDVWTENYELWEKVESSLKGGAPGSRILVTTRKDDVSTMMGTTYKHPLRE 326

Query: 187  LSDDDCWDLFRHIAFWGRTQQEQERLKGIGQEIAKKCKGVPLAVKTLASLMRFKRAKEDW 8
            LS+  CW LF +IAF GR++++ E L+ IG++IA KC+G+PLA K L SLMR K  KE+W
Sbjct: 327  LSEGQCWSLFSNIAFCGRSREKVEELENIGRKIADKCRGLPLAAKVLGSLMRLKDNKENW 386


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 987

 Score =  303 bits (777), Expect = 4e-80
 Identities = 168/389 (43%), Positives = 236/389 (60%), Gaps = 33/389 (8%)
 Frame = -1

Query: 1075 EELQNLETKLHLVKAVLEDAEKKEIHDSAVKVWLGQLKDVMYDAEDVLDEWNTRIL---- 908
            +E+Q+L+     ++ VLEDAE+K++ D+AVK WL  LKDV YD +DVLDEW+T +L    
Sbjct: 33   KEIQHLKNNFQAIRDVLEDAERKQLKDTAVKHWLNNLKDVSYDMDDVLDEWSTAVLKWEM 92

Query: 907  ----------------------------ISANGPHVANRVRSYLLSLCACFRHVGVRHGI 812
                                         + N     + V S+L S C  FR V  RH I
Sbjct: 93   EEAENALAPKSVVFSFLRSCCFCFRRAEQAENALAPKSVVSSFLCSFCCSFRRVARRHDI 152

Query: 811  AHRIKGIVKRLDGIARNKDPLSL-VQSHSHGEPRQLTSSVVDVSVICGRDLDKQSILSRL 635
            AH+I  + ++L+ IA+ K      +      EP + T+S VDVS + GR+ +K++++S+L
Sbjct: 153  AHKIIEVGQKLEDIAKRKAMFGFELHKAIEKEPDRQTTSFVDVSRVHGREDEKKNVISKL 212

Query: 634  LCETSQQETQVCIPILSIVGTGGFGKTTLAQLVYNEGTIATTFELKIWVCVSEPFDLERV 455
            LC++SQ+  +V   ++SIVG GG GKTTLAQL YN   I T FE +IWVCVS PFD   V
Sbjct: 213  LCDSSQEGRKV--QVISIVGMGGLGKTTLAQLAYNADEIKTYFEKRIWVCVSHPFDENTV 270

Query: 454  AREIIEQATGGKPPNVVGWEPLHQLLCNSLKGKRFLLMLDDVWTEDSNYWELLKLSLDGG 275
            A+ IIE  +G   PN+V  EPL + +  S++GK+FLL+LDDVW ++   WE LK SL  G
Sbjct: 271  AKAIIEDLSGA-APNLVELEPLCKRISESIEGKKFLLVLDDVWEDNPRKWEPLKESLKCG 329

Query: 274  ERGSKIIVTTRNEAVAIMIGSIYIHRLAQLSDDDCWDLFRHIAFWGRTQQEQERLKGIGQ 95
              GS+I+VTTR + VA M+ S Y   L +L+D++CW +F  +AF+GR+Q   E    IG+
Sbjct: 330  APGSRILVTTRKDTVAKMMESDYSLLLGKLTDEECWSVFSQVAFYGRSQDACEMFTEIGR 389

Query: 94   EIAKKCKGVPLAVKTLASLMRFKRAKEDW 8
            +I  +CKG+PLA KTL  LM+ K   EDW
Sbjct: 390  QIVYRCKGLPLAAKTLGGLMQSKTTTEDW 418


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 945

 Score =  301 bits (770), Expect = 2e-79
 Identities = 163/363 (44%), Positives = 238/363 (65%), Gaps = 7/363 (1%)
 Frame = -1

Query: 1075 EELQNLETKLHLVKAVLEDAEKKEIHDSAVKVWLGQLKDVMYDAEDVLDEWNTRILI--- 905
            +++  L++ L  +++VLEDA++K++ D AV+ W+ +LKD  YD +DVLDEW+T IL    
Sbjct: 33   KQVDKLKSNLLDIQSVLEDADRKQVKDKAVRDWVDKLKDACYDMDDVLDEWSTAILRWKM 92

Query: 904  --SANGPHVANRVR-SYLLSLCACFRHVGVRHGIAHRIKGIVKRLDGIARNKDPLSLVQS 734
              +    H   ++R S+L S C CF  V  R  IA +IK + +++D IA+ +        
Sbjct: 93   EEAEENTHSRQKIRCSFLGSPCFCFNQVVRRRDIALKIKEVSEKVDDIAKERAKYGFDLY 152

Query: 733  HSHGEPRQLTS-SVVDVSVICGRDLDKQSILSRLLCETSQQETQVCIPILSIVGTGGFGK 557
                E ++LT+ S VD S + GRD +K++++S+LL E+S +   V   ++S+VG GG GK
Sbjct: 153  KGTDELQRLTTTSFVDESSVIGRDGEKRNVVSKLLAESSHEARDV--DVISLVGLGGIGK 210

Query: 556  TTLAQLVYNEGTIATTFELKIWVCVSEPFDLERVAREIIEQATGGKPPNVVGWEPLHQLL 377
            TTLAQL +N+  +   FE KIWVCVSEPFD  R+A+ I+EQ  G +P N+V  + L Q +
Sbjct: 211  TTLAQLAFNDSEVTAHFEKKIWVCVSEPFDEIRIAKAILEQLEG-RPTNLVELQSLLQGV 269

Query: 376  CNSLKGKRFLLMLDDVWTEDSNYWELLKLSLDGGERGSKIIVTTRNEAVAIMIGSIYIHR 197
              S+ GKR LL+LDDVWTE+   WE LK SL G  RGS+I+VTTR +AVA M+G+ +   
Sbjct: 270  SESITGKRLLLVLDDVWTENHGQWEQLKPSLTGCARGSRILVTTRKDAVATMMGTDHRIN 329

Query: 196  LAQLSDDDCWDLFRHIAFWGRTQQEQERLKGIGQEIAKKCKGVPLAVKTLASLMRFKRAK 17
            + +LSD+ C  +F H+AF  R++ E+ERL  IG +IA KCKG+PLA K L  LM+ KR +
Sbjct: 330  IEKLSDEICRSIFNHVAFQERSEDERERLTDIGDKIANKCKGLPLAAKVLGGLMQSKRTR 389

Query: 16   EDW 8
            E+W
Sbjct: 390  EEW 392


>ref|XP_002268266.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 932

 Score =  299 bits (765), Expect = 9e-79
 Identities = 162/363 (44%), Positives = 236/363 (65%), Gaps = 6/363 (1%)
 Frame = -1

Query: 1072 ELQNLETKLHLVKAVLEDAEKKEIHDSAVKVWLGQLKDVMYDAEDVLDEWNTRILI---- 905
            E+Q+L   L  V+ VLEDAE++++ + +V+ WL +LKD+ Y  +DVLDEW+T IL     
Sbjct: 34   EIQSLTDTLRSVRDVLEDAERRQVKEKSVQGWLERLKDMAYQMDDVLDEWSTAILQLQME 93

Query: 904  -SANGPHVANRVRSYLLSLCACFRHVGVRHGIAHRIKGIVKRLDGIARNKDPLSLVQSHS 728
             + N     N+V S + S C CF+ V  R  IA +IK + ++LD IA  +   + + S +
Sbjct: 94   GAENASMSKNKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQLDVIASERTRFNFISSGT 153

Query: 727  HGEPRQLTSSVVDVSVICGRDLDKQSILSRLLCETSQQETQVCIPILSIVGTGGFGKTTL 548
                R +T+S +DVS + GRD D  +IL RLL E  ++++++ I  ++IVGTGG GKTTL
Sbjct: 154  QEPQRLITTSAIDVSEVYGRDTDVNAILGRLLGENDEEKSRLYI--IAIVGTGGMGKTTL 211

Query: 547  AQLVYNEGTIATTFELKIWVCVSEPFDLERVAREIIEQATGGKPPNVVGWEPLHQLLCNS 368
            AQL YN   +   F+ +IWVCVS+PFD  RV R I+E     KP N+   E + Q +   
Sbjct: 212  AQLAYNHPEVKAHFDERIWVCVSDPFDPIRVCRAIVETLQK-KPCNLHDLEAVQQEIQTC 270

Query: 367  LKGKRFLLMLDDVWTEDSNYWELLKLSLD-GGERGSKIIVTTRNEAVAIMIGSIYIHRLA 191
            + GK+FLL+LDD+WTED   WE LK +L+ G   GS+I+VTTR + VA M+G+ Y H + 
Sbjct: 271  IAGKKFLLVLDDMWTEDYRLWEQLKNTLNYGAVGGSRILVTTRKDNVAKMMGTTYKHPIG 330

Query: 190  QLSDDDCWDLFRHIAFWGRTQQEQERLKGIGQEIAKKCKGVPLAVKTLASLMRFKRAKED 11
            +LS      LF  IAF+G+++++ E LK IG++IA KCKG+PLA+KTL +LMR K  KE+
Sbjct: 331  ELSPQHAEVLFHQIAFFGKSREQVEELKEIGEKIADKCKGLPLAIKTLGNLMRLKNKKEE 390

Query: 10   WRD 2
            W++
Sbjct: 391  WKN 393


Top