BLASTX nr result
ID: Coptis21_contig00001129
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00001129
(2072 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus commu... 363 1e-97
ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-bin... 356 1e-95
ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like pr... 348 2e-94
gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera] 343 8e-92
emb|CBI27664.3| unnamed protein product [Vitis vinifera] 322 2e-85
>ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus communis]
gi|223545956|gb|EEF47459.1| LIGULELESS1 protein, putative
[Ricinus communis]
Length = 483
Score = 363 bits (931), Expect = 1e-97
Identities = 189/350 (54%), Positives = 234/350 (66%), Gaps = 4/350 (1%)
Frame = -2
Query: 1303 EPVIGLKLGKRTYFEDVCAGS-VVXXXXXXXXXXXXXXXXXXXXXSYHSTQTPRCQVEGC 1127
EP++GLKLGKRTYFEDVCAGS + S ++ TPRCQVEGC
Sbjct: 134 EPLLGLKLGKRTYFEDVCAGSNIKSSSFSSAIPGSSISPPKRSKSSSQASSTPRCQVEGC 193
Query: 1126 NFDLSSSKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKRSCRRRLS 947
N DLSS+KDYHR+HRVCE HSKCP+V+VAGLERRFCQQCSRFH L EFDEKKRSCRRRLS
Sbjct: 194 NLDLSSAKDYHRKHRVCENHSKCPKVIVAGLERRFCQQCSRFHGLSEFDEKKRSCRRRLS 253
Query: 946 DHNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIK- 770
DHNARRRK QP+ IQ NS RLSSS YD R MSL++NR PL H R AN WE T K
Sbjct: 254 DHNARRRKPQPESIQMNSARLSSSSYDERPHMSLVWNRAPLVHARANANLAWEGTSSSKF 313
Query: 769 PEAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGST--TEVLSQGFEA 596
KE V++ K+ I+G+L+L N L ++IPL + LL K EVL+Q E
Sbjct: 314 TITKEYVLKPAKIGGIDGQLHLPANELTTSIPLHPHNCKSLLPSKAKVPIAEVLNQDLEE 373
Query: 595 PVTASNLDVAPDFRCALSLLSNNPWRSGNPEHTSLDQLMNANHTSMAHPAMHAVPQGWPL 416
+ +SN+D D ALSLLS N W S P+ S ++ +HT M +HAVPQG PL
Sbjct: 374 SIISSNVDATQDLHRALSLLSTNSWGSCEPKSFSHERPAQLSHTGMPQSVLHAVPQGLPL 433
Query: 415 GSSEYWQAVQQPVDTQVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 266
SS+YW+A Q +++VH++ SQ S ++FQEFQL +AP+++ +YSSQ+N
Sbjct: 434 TSSDYWRAEQHITNSRVHTLTSQNDSSSYFQEFQLLRAPYDNDFYSSQLN 483
>ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-binding protein SPL10 [Vitis
vinifera]
Length = 506
Score = 356 bits (914), Expect = 1e-95
Identities = 183/334 (54%), Positives = 222/334 (66%), Gaps = 1/334 (0%)
Frame = -2
Query: 1303 EPVIGLKLGKRTYFEDVCAGSVVXXXXXXXXXXXXXXXXXXXXXSYHSTQTPRCQVEGCN 1124
E +IGLKLGKRTYFEDVCA S SY S+QTPRCQVEGCN
Sbjct: 128 EAMIGLKLGKRTYFEDVCAASTAKTTTSSVNPASSVSATKRFRTSYQSSQTPRCQVEGCN 187
Query: 1123 FDLSSSKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKRSCRRRLSD 944
DL S+KDYHRRHR+CE HSK P+V+VAGLERRFCQQCSRFH+L EFD+KKRSCRRRL+D
Sbjct: 188 LDLKSAKDYHRRHRICENHSKSPKVIVAGLERRFCQQCSRFHELTEFDDKKRSCRRRLND 247
Query: 943 HNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIK-P 767
HNARRR+ P+ IQF+S RL SS YD RQ ++L NR+P+ PVA P W+ C K
Sbjct: 248 HNARRRRPHPESIQFSSGRLPSSLYDGRQQINLACNRLPI----PVATPMWQNPCSFKDT 303
Query: 766 EAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQGFEAPVT 587
+ S++R VK I+ +L+L + +P AI ++H +S+R+LSF GST VL+QG EA
Sbjct: 304 QTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHGNSERMLSFDGSTPRVLNQGLEASAI 363
Query: 586 ASNLDVAPDFRCALSLLSNNPWRSGNPEHTSLDQLMNANHTSMAHPAMHAVPQGWPLGSS 407
ASN +VAPDFR ALSLLS N W +P TSLDQLM+ N TSMA P MHA P W L SS
Sbjct: 364 ASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQTSMAQPTMHAEPHNWALASS 423
Query: 406 EYWQAVQQPVDTQVHSMASQISSGNHFQEFQLFK 305
E Q P +T+ HS+ + F+ F K
Sbjct: 424 ENMHVQQTPSETRGHSLDLHNNEAACFKSFNYLK 457
>ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Vitis
vinifera]
Length = 477
Score = 348 bits (894), Expect(2) = 2e-94
Identities = 182/346 (52%), Positives = 224/346 (64%)
Frame = -2
Query: 1303 EPVIGLKLGKRTYFEDVCAGSVVXXXXXXXXXXXXXXXXXXXXXSYHSTQTPRCQVEGCN 1124
EP+IGLKLGKRTYFEDV AG+ S + RCQVEGCN
Sbjct: 134 EPLIGLKLGKRTYFEDVSAGANAKGSVFSVIPISSDTTAKRSRLSCQNAHVSRCQVEGCN 193
Query: 1123 FDLSSSKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKRSCRRRLSD 944
DLS++KDYHR+HRVCE+H+KCP+V+V GLERRFCQQCSRFH L EFDEKKRSCRRRLSD
Sbjct: 194 LDLSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSD 253
Query: 943 HNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIKPE 764
HNARRRK QP+GIQ NS RL SSFY +Q MSL+ + VP+ HTRP NP+WE TC +
Sbjct: 254 HNARRRKPQPEGIQSNSARL-SSFYGGKQQMSLVLSSVPIVHTRPAVNPSWEGTCSKFTQ 312
Query: 763 AKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQGFEAPVTA 584
K ++R I+ +L+L + L + I + DS RLL KG+ EVL+QG + +
Sbjct: 313 TK-GLVRPGNTGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIAEVLNQGLGDSMIS 371
Query: 583 SNLDVAPDFRCALSLLSNNPWRSGNPEHTSLDQLMNANHTSMAHPAMHAVPQGWPLGSSE 404
SNLD + D R ALSLLS N W S + D M+ N TSM MHAV QG +SE
Sbjct: 372 SNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQGMLHSTSE 431
Query: 403 YWQAVQQPVDTQVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 266
+W+ D++VH + SQ HFQEF+LFKAP+ESG+ S Q+N
Sbjct: 432 HWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYESGFSSGQLN 477
Score = 26.2 bits (56), Expect(2) = 2e-94
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 1466 NFTFETVERFGQDLGKKK 1413
NFTFE + F QD KK+
Sbjct: 95 NFTFEAFQDFSQDFNKKR 112
>gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]
Length = 500
Score = 343 bits (881), Expect = 8e-92
Identities = 178/334 (53%), Positives = 218/334 (65%), Gaps = 1/334 (0%)
Frame = -2
Query: 1303 EPVIGLKLGKRTYFEDVCAGSVVXXXXXXXXXXXXXXXXXXXXXSYHSTQTPRCQVEGCN 1124
E +IGLKLGKR YFEDVCA S SY S+QTPRCQVEGCN
Sbjct: 122 EAMIGLKLGKRPYFEDVCAASTAKTTTSSVNPASSVSATKRFRTSYQSSQTPRCQVEGCN 181
Query: 1123 FDLSSSKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKRSCRRRLSD 944
DL S+KDYHRRHR+CE HSK P+V+VAGLERRFCQQCSRFH+L EFD+KKRS RRRL+D
Sbjct: 182 LDLKSAKDYHRRHRICENHSKSPKVIVAGLERRFCQQCSRFHELTEFDDKKRSRRRRLND 241
Query: 943 HNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWEATCCIK-P 767
HNARRR+ P+ IQF+S RL SS YD RQ ++L NR+P+ PVA P W+ C K
Sbjct: 242 HNARRRRPHPESIQFSSGRLPSSLYDGRQQINLACNRLPI----PVATPMWQNPCSFKDT 297
Query: 766 EAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQGFEAPVT 587
+ S++R VK I+ +L+L + +P AI ++H +S+R+LSF GST VL+QG EA
Sbjct: 298 QTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHVNSERMLSFDGSTPRVLNQGLEASAI 357
Query: 586 ASNLDVAPDFRCALSLLSNNPWRSGNPEHTSLDQLMNANHTSMAHPAMHAVPQGWPLGSS 407
ASN +VAPDFR ALSLLS N W +P TSLDQLM+ N +SMA P MH P W L SS
Sbjct: 358 ASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQSSMAQPTMHVEPHNWALASS 417
Query: 406 EYWQAVQQPVDTQVHSMASQISSGNHFQEFQLFK 305
E Q P + + HS+ + F+ F K
Sbjct: 418 ENMHVQQTPSEIRGHSLDLHNNEAACFKSFNYLK 451
>emb|CBI27664.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 322 bits (826), Expect = 2e-85
Identities = 163/294 (55%), Positives = 202/294 (68%)
Frame = -2
Query: 1147 RCQVEGCNFDLSSSKDYHRRHRVCETHSKCPRVVVAGLERRFCQQCSRFHDLMEFDEKKR 968
RCQVEGCN DLS++KDYHR+HRVCE+H+KCP+V+V GLERRFCQQCSRFH L EFDEKKR
Sbjct: 127 RCQVEGCNLDLSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEFDEKKR 186
Query: 967 SCRRRLSDHNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWE 788
SCRRRLSDHNARRRK QP+GIQ NS RL SSFY +Q MSL+ + VP+ HTRP NP+WE
Sbjct: 187 SCRRRLSDHNARRRKPQPEGIQSNSARL-SSFYGGKQQMSLVLSSVPIVHTRPAVNPSWE 245
Query: 787 ATCCIKPEAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQ 608
TC + K ++R I+ +L+L + L + I + DS RLL KG+ EVL+Q
Sbjct: 246 GTCSKFTQTK-GLVRPGNTGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIAEVLNQ 304
Query: 607 GFEAPVTASNLDVAPDFRCALSLLSNNPWRSGNPEHTSLDQLMNANHTSMAHPAMHAVPQ 428
G + +SNLD + D R ALSLLS N W S + D M+ N TSM MHAV Q
Sbjct: 305 GLGDSMISSNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQ 364
Query: 427 GWPLGSSEYWQAVQQPVDTQVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 266
G +SE+W+ D++VH + SQ HFQEF+LFKAP+ESG+ S Q+N
Sbjct: 365 GMLHSTSEHWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYESGFSSGQLN 418