BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001127
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235061.1| uncharacterized protein LOC100306695 [Glycin...   185   1e-44
gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana t...   184   2e-44
ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform...   184   4e-44
ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [C...   183   6e-44
gb|AFK34998.1| unknown [Lotus japonicus]                              182   1e-43

>ref|NP_001235061.1| uncharacterized protein LOC100306695 [Glycine max]
           gi|255629303|gb|ACU14996.1| unknown [Glycine max]
          Length = 107

 Score =  185 bits (470), Expect = 1e-44
 Identities = 89/106 (83%), Positives = 96/106 (90%)
 Frame = +1

Query: 127 MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEAMRLRKCNRTVMRWNTPTVRG 306
           MNAFKA+KACVPIAWSP+IYITLVRG+PGTR+LHRRTLEA+RLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNIYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 307 MLQQVKRLVVIETEEMFKARKQKLVTHRDLRPPLVIDHHPIPTPDS 444
           MLQQVKRLVVIETEEM+KARKQK   HR LRPPLVI H P    D+
Sbjct: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVISHKPPSVTDA 106


>gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana tabacum]
          Length = 108

 Score =  184 bits (468), Expect = 2e-44
 Identities = 85/108 (78%), Positives = 98/108 (90%)
 Frame = +1

Query: 127 MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEAMRLRKCNRTVMRWNTPTVRG 306
           M+A+ AFKAC PI+WSP++YITLVRG+PGTR+LHRRTLEA+RLRKCNRTVMRWNTPTVRG
Sbjct: 1   MSAYNAFKACAPISWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 307 MLQQVKRLVVIETEEMFKARKQKLVTHRDLRPPLVIDHHPIPTPDSSQ 450
           MLQQVKRLVVIETEEM+KARK+KL  H+ LRPPLV++HH  P  DS Q
Sbjct: 61  MLQQVKRLVVIETEEMYKARKEKLSDHKALRPPLVVNHHAAPAADSVQ 108


>ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform 1 [Vitis vinifera]
           gi|359474731|ref|XP_003631524.1| PREDICTED: 50S
           ribosomal protein L30 isoform 2 [Vitis vinifera]
           gi|359474733|ref|XP_003631525.1| PREDICTED: 50S
           ribosomal protein L30 isoform 3 [Vitis vinifera]
           gi|296085477|emb|CBI29209.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score =  184 bits (466), Expect = 4e-44
 Identities = 90/108 (83%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
 Frame = +1

Query: 127 MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEAMRLRKCNRTVMRWNTPTVRG 306
           MNAFKAFKACVP+AWSP++YITLVRG+PGTR+LHRRTLEA+RLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAFKACVPVAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 307 MLQQVKRLVVIETEEMFKARKQKLVTHRDLRPPLVIDH-HPIPTPDSS 447
           MLQQVKRLVVIETEEM+KARK K   HR LRPPLVI+H  P P  DSS
Sbjct: 61  MLQQVKRLVVIETEEMYKARKLKETNHRALRPPLVINHVLPPPANDSS 108


>ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [Cucumis sativus]
           gi|449522520|ref|XP_004168274.1| PREDICTED: 50S
           ribosomal protein L30-like [Cucumis sativus]
          Length = 108

 Score =  183 bits (464), Expect = 6e-44
 Identities = 87/107 (81%), Positives = 98/107 (91%)
 Frame = +1

Query: 127 MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEAMRLRKCNRTVMRWNTPTVRG 306
           MNAFKAFKA VPIAWS ++YITLVRGMPGTR+LHRRTLEA+RLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAFKASVPIAWSTNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 307 MLQQVKRLVVIETEEMFKARKQKLVTHRDLRPPLVIDHHPIPTPDSS 447
           M+QQVKRLVV+ETEEM+KARKQK+  HR LRPPLVI+H P P+  S+
Sbjct: 61  MIQQVKRLVVVETEEMYKARKQKMEQHRALRPPLVINHLPAPSSASA 107


>gb|AFK34998.1| unknown [Lotus japonicus]
          Length = 116

 Score =  182 bits (462), Expect = 1e-43
 Identities = 87/107 (81%), Positives = 97/107 (90%)
 Frame = +1

Query: 106 FGLRSKRMNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEAMRLRKCNRTVMRW 285
           F  + + MNAFKA+KACVPIAWSP++YITLVRG+PGTR+LHRRTLEA+RL KCNRTVMRW
Sbjct: 3   FCFQVEGMNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRW 62

Query: 286 NTPTVRGMLQQVKRLVVIETEEMFKARKQKLVTHRDLRPPLVIDHHP 426
           NTPTVRGMLQQVKRLVVIETEEM+KARKQK   HR LRPPLVI+H P
Sbjct: 63  NTPTVRGMLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQP 109