BLASTX nr result

ID: Coptis21_contig00001123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001123
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303698.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
emb|CBI39030.3| unnamed protein product [Vitis vinifera]              147   9e-34
ref|XP_002273016.1| PREDICTED: probable LRR receptor-like serine...   147   9e-34
ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine...   142   4e-32
emb|CBI39026.3| unnamed protein product [Vitis vinifera]              142   4e-32

>ref|XP_002303698.1| predicted protein [Populus trichocarpa] gi|222841130|gb|EEE78677.1|
           predicted protein [Populus trichocarpa]
          Length = 1016

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/102 (68%), Positives = 80/102 (78%)
 Frame = +1

Query: 1   NSIFQQWGTSAVSSWNRSGNPCTGAAIDTTDIEDQPSNPGIKCNCALTNGTCHITQLRVS 180
           NS+F+QW T AV  WN SG PC+G+AID TD ED  +NP IKC C  T  TCHITQLRV 
Sbjct: 23  NSLFEQWDTQAVGLWNLSGEPCSGSAIDQTDFEDPDNNPAIKCECTQT--TCHITQLRVY 80

Query: 181 ALNVRGVIPEELGSLTFLTFLKLDQNYLTGPLPAFLGNLSAL 306
           ALN +GVIPE L +L +LTFLK+DQNY TGPLPAF+GNLSAL
Sbjct: 81  ALNKKGVIPEVLAALKYLTFLKIDQNYFTGPLPAFIGNLSAL 122


>emb|CBI39030.3| unnamed protein product [Vitis vinifera]
          Length = 2282

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/103 (66%), Positives = 83/103 (80%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1   NSIFQQWGTSAVSSWNRSGNPCTGAAIDTTDIEDQPSNPGIKCNCALTNGT-CHITQLRV 177
           NSIFQQW T +V+ WN SG PCTG+AI+ T  E   +NP IKC+C+  +GT CHITQLRV
Sbjct: 52  NSIFQQWDTQSVALWNISGEPCTGSAINGTAFESDDNNPAIKCDCSYDSGTTCHITQLRV 111

Query: 178 SALNVRGVIPEELGSLTFLTFLKLDQNYLTGPLPAFLGNLSAL 306
            ALN +GVIPEEL +LT+LTFLK+DQNY TGPLP+F+GNLS L
Sbjct: 112 YALNKKGVIPEELATLTYLTFLKIDQNYFTGPLPSFIGNLSKL 154



 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/103 (59%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    NSIFQQWGTSAVSSWNRSGNPCTGAAIDTTDIEDQPSNPGIKCNCAL-TNGTCHITQLRV 177
            NS+FQ+W   AV  WN SG PC+G+AI+ T+ E + ++P IKC+C+  +N TCHITQLRV
Sbjct: 1323 NSLFQKWDIEAVPLWNISGEPCSGSAINGTEFESEANSPAIKCDCSYDSNTTCHITQLRV 1382

Query: 178  SALNVRGVIPEELGSLTFLTFLKLDQNYLTGPLPAFLGNLSAL 306
             ALN RGVI EE  + T+L  LKLD+NY TGPLP+F+GNLS L
Sbjct: 1383 HALNKRGVIVEEFKAFTYLMVLKLDKNYFTGPLPSFIGNLSQL 1425


>ref|XP_002273016.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1048

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/103 (66%), Positives = 83/103 (80%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1   NSIFQQWGTSAVSSWNRSGNPCTGAAIDTTDIEDQPSNPGIKCNCALTNGT-CHITQLRV 177
           NSIFQQW T +V+ WN SG PCTG+AI+ T  E   +NP IKC+C+  +GT CHITQLRV
Sbjct: 52  NSIFQQWDTQSVALWNISGEPCTGSAINGTAFESDDNNPAIKCDCSYDSGTTCHITQLRV 111

Query: 178 SALNVRGVIPEELGSLTFLTFLKLDQNYLTGPLPAFLGNLSAL 306
            ALN +GVIPEEL +LT+LTFLK+DQNY TGPLP+F+GNLS L
Sbjct: 112 YALNKKGVIPEELATLTYLTFLKIDQNYFTGPLPSFIGNLSKL 154


>ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1037

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/103 (65%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1   NSIFQQWGTSAVSSWNRSGNPCTGAAIDTTDIEDQPSNPGIKCNCALTNGT-CHITQLRV 177
           NSIFQQW T + + WN SG PCTG+AI  +  E+  +NP I C+C   N T CHITQLRV
Sbjct: 7   NSIFQQWDTQSAALWNISGEPCTGSAISGSGFEETANNPAITCDCTYNNSTTCHITQLRV 66

Query: 178 SALNVRGVIPEELGSLTFLTFLKLDQNYLTGPLPAFLGNLSAL 306
            ALN RGVIPEEL +LT+LTFLK+DQNY TGPLP+F+GNLS L
Sbjct: 67  YALNRRGVIPEELTALTYLTFLKIDQNYFTGPLPSFIGNLSKL 109


>emb|CBI39026.3| unnamed protein product [Vitis vinifera]
          Length = 1037

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/103 (65%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1   NSIFQQWGTSAVSSWNRSGNPCTGAAIDTTDIEDQPSNPGIKCNCALTNGT-CHITQLRV 177
           NSIFQQW T + + WN SG PCTG+AI  +  E+  +NP I C+C   N T CHITQLRV
Sbjct: 52  NSIFQQWDTQSAALWNISGEPCTGSAISGSGFEETANNPAITCDCTYNNSTTCHITQLRV 111

Query: 178 SALNVRGVIPEELGSLTFLTFLKLDQNYLTGPLPAFLGNLSAL 306
            ALN RGVIPEEL +LT+LTFLK+DQNY TGPLP+F+GNLS L
Sbjct: 112 YALNRRGVIPEELTALTYLTFLKIDQNYFTGPLPSFIGNLSKL 154


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