BLASTX nr result

ID: Coptis21_contig00001102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001102
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [...   306   4e-81
ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   289   8e-76
ref|XP_002525052.1| conserved hypothetical protein [Ricinus comm...   267   3e-69
ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like ...   258   2e-66
ref|XP_004143689.1| PREDICTED: elongator complex protein 6-like ...   256   5e-66

>ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [Vitis vinifera]
            gi|297736457|emb|CBI25328.3| unnamed protein product
            [Vitis vinifera]
          Length = 256

 Score =  306 bits (785), Expect = 4e-81
 Identities = 155/249 (62%), Positives = 193/249 (77%), Gaps = 9/249 (3%)
 Frame = -3

Query: 1006 LLDEAVGLGGRG--VVVIEDCVETSGAFILDHFIKR--ALSSSTHGVVLLIALAHPFSHY 839
            LLDEA+ L      V+VIEDCVET+GAF+L H +KR  AL +S+   V+ +A + PFSHY
Sbjct: 9    LLDEALALDWTQPRVIVIEDCVETNGAFVLHHVLKRSLALHTSSTSAVIFLAFSQPFSHY 68

Query: 838  ERVLRKQGCNLVTQSENSRFFFFDMLKLDCPEG-----AGGLVELYQKIRKAVEVISSHK 674
            +R+LRK GCNLVT  +N RF FF++L L+CP+G     +GGL  LY++I+K +  I+ H+
Sbjct: 69   DRILRKLGCNLVTPKDNKRFVFFNLLTLECPDGDEGKTSGGLPSLYREIQKVI--IALHE 126

Query: 673  HNRSDITIMIDDISLMEVAACGSFNYVLDFLHYCHTLTSEIGCSLVVLNHDDIYSSTIAP 494
             NR  ITIMIDDISLMEVAA GS N+VLDFLHYCHTLT E GC LV +NH DIYSS   P
Sbjct: 127  ENRKSITIMIDDISLMEVAANGSTNHVLDFLHYCHTLTLEFGCLLVTVNHGDIYSSMERP 186

Query: 493  SLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKESS 314
            +L+L+MEYLA+++IK EPL+TGLATDVHGQLTVLNKGI +  G  RNR HNFHFK+KE+S
Sbjct: 187  ALLLQMEYLADILIKAEPLSTGLATDVHGQLTVLNKGICEGQGNSRNRTHNFHFKVKENS 246

Query: 313  VDYFYPGSR 287
            V+ FYPG+R
Sbjct: 247  VECFYPGTR 255


>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
            predicted protein [Populus trichocarpa]
          Length = 261

 Score =  289 bits (739), Expect = 8e-76
 Identities = 148/255 (58%), Positives = 190/255 (74%), Gaps = 15/255 (5%)
 Frame = -3

Query: 1006 LLDEAVGLGG-------RG-VVVIEDCVETSGAFILDHFIKRALSS-STHGVVLLIALAH 854
            LLDEA+GL         RG VV+IEDCVETSG F+L   +KR LSS S +  V+ +A +H
Sbjct: 8    LLDEALGLDYQTDPWPLRGKVVLIEDCVETSGCFVLHQLLKRTLSSQSPNNTVIFLAFSH 67

Query: 853  PFSHYERVLRKQGCNLVTQSENSRFFFFDMLKLDCPE------GAGGLVELYQKIRKAVE 692
            P SHY+R+LRK GCNLV Q EN RFFFFDMLKL CP+      G GG   LY KI+  + 
Sbjct: 68   PLSHYDRILRKLGCNLVAQRENGRFFFFDMLKLLCPDEKEGKTGKGGFTALYWKIQNTIC 127

Query: 691  VISSHKHNRSDITIMIDDISLMEVAACGSFNYVLDFLHYCHTLTSEIGCSLVVLNHDDIY 512
             +   ++N++  TIMIDD+SLMEVAA GS ++VL+F+HYCHTLTSE+GCSL+ LNH+DIY
Sbjct: 128  ALP--ENNKNHATIMIDDMSLMEVAAHGSSDHVLNFMHYCHTLTSELGCSLITLNHEDIY 185

Query: 511  SSTIAPSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHF 332
            +S   P+ ML+ +YL +++IK EPLATGLA DVHGQLTVLN+   +  G+ +N+I NFHF
Sbjct: 186  TSMERPTFMLQTKYLVDVLIKAEPLATGLAADVHGQLTVLNRDFCNVKGSSKNKISNFHF 245

Query: 331  KIKESSVDYFYPGSR 287
            K+KE+SV+YFYPG+R
Sbjct: 246  KVKENSVEYFYPGTR 260


>ref|XP_002525052.1| conserved hypothetical protein [Ricinus communis]
            gi|223535633|gb|EEF37299.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 284

 Score =  267 bits (683), Expect = 3e-69
 Identities = 141/277 (50%), Positives = 182/277 (65%), Gaps = 34/277 (12%)
 Frame = -3

Query: 1006 LLDEAVGLGGRG---------VVVIEDCVETSGAFILDHFIKRALSSSTHGVVLLIALAH 854
            LL+EA+GL             V+VIED VETSG+F+L+H IKR LS ++  V++ +A ++
Sbjct: 8    LLEEALGLEEEASNTWDLRGKVIVIEDRVETSGSFLLNHLIKRILSPNSFKVIIFLAFSN 67

Query: 853  PFSHYERVLRKQGCNLVTQSENSRFFFFDMLKLDCP------------------------ 746
            PFSHY+R+LRK GCNL    +  RFFFFDML L C                         
Sbjct: 68   PFSHYDRILRKLGCNLAAHKDCGRFFFFDMLMLQCSGEKWLNLFDHKSFEFNSLLDRNEG 127

Query: 745  -EGAGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDISLMEVAACGSFNYVLDFLHYCH 569
                 G + L+ +I+K +  +  +  N   +TIMIDD+SLMEVAA GS + VLDFLHYCH
Sbjct: 128  NSNKAGFITLFGEIQKVICALPENYKNH--VTIMIDDVSLMEVAAYGSSDRVLDFLHYCH 185

Query: 568  TLTSEIGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLN 389
            TLTS+ GCSLV LNH+DIYS+    + +L+MEYLA+++IK EPLATGLATDVHGQLTVL+
Sbjct: 186  TLTSDFGCSLVTLNHEDIYSTMERRAFILQMEYLADILIKAEPLATGLATDVHGQLTVLS 245

Query: 388  KGIIDEHGTLRNRIHNFHFKIKESSVDYFYPGSRNLG 278
             GI    G L+N+I NF F +KE+SV+YFYPGSR  G
Sbjct: 246  TGICCRKGNLKNKISNFQFMVKENSVEYFYPGSRTCG 282


>ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  258 bits (659), Expect = 2e-66
 Identities = 139/256 (54%), Positives = 180/256 (70%), Gaps = 16/256 (6%)
 Frame = -3

Query: 1006 LLDEAVG---------LGGRGVVVIEDCVETSGAFILDHFIKRALSSS-THGVVLLIALA 857
            LLDEA+G         L GR ++++EDCVETSGAF+L H +KRA SS  +  VV+ +A +
Sbjct: 8    LLDEAIGFDDPTNPTPLIGR-LLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLAFS 66

Query: 856  HPFSHYERVLRKQGCNLVTQSENSRFFFFDMLKLDCPE------GAGGLVELYQKIRKAV 695
              F HY+R+LRK GCNL  Q ++ RF FFDML L C +      G G LV LY KI++AV
Sbjct: 67   QSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETGEGVLVGLYCKIQRAV 126

Query: 694  EVISSHKHNRSDITIMIDDISLMEVAACGSFNYVLDFLHYCHTLTSEIGCSLVVLNHDDI 515
              +   + N+  ITI+IDDISL+EVAA GS N+VLDFLHYCHTL SE+GCS++ L+H+D+
Sbjct: 127  HALI--QENKKHITIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIALDHEDV 184

Query: 514  YSSTIAPSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFH 335
            Y     P L L++EYLA+++IKV PLATG+A DVHGQLTVLNK +      LRNR+ NF 
Sbjct: 185  YMDIERP-LSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQ 243

Query: 334  FKIKESSVDYFYPGSR 287
            F IKE+  ++FY GSR
Sbjct: 244  FYIKENGTEFFYSGSR 259


>ref|XP_004143689.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  256 bits (655), Expect = 5e-66
 Identities = 138/256 (53%), Positives = 179/256 (69%), Gaps = 16/256 (6%)
 Frame = -3

Query: 1006 LLDEAVG------LGGRGVVVIEDCVETSGAFILDHFIKRALSSS-THGVVLLIALAHPF 848
            LLDEA+G      L GR ++++EDCVETSGAF+L H +KRA SS  +  VV+ +A +  F
Sbjct: 8    LLDEAIGFDDPTPLIGR-LLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLAFSQSF 66

Query: 847  SHYERVLRKQGCNLVTQSENSRFFFFDMLKLDCP---------EGAGGLVELYQKIRKAV 695
             HY+R+LRK GCNL  Q ++ RF FFDML L C           G G LV LY KI++AV
Sbjct: 67   IHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSGEKTRSGKETGEGVLVGLYCKIQRAV 126

Query: 694  EVISSHKHNRSDITIMIDDISLMEVAACGSFNYVLDFLHYCHTLTSEIGCSLVVLNHDDI 515
              +   + N+  +TI+IDDISL+EVAA GS N+VLDFLHYCHTL SE+GCS++ L+H+D+
Sbjct: 127  HALI--QENKKHVTIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIALDHEDV 184

Query: 514  YSSTIAPSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFH 335
            Y     P L L++EYLA+++IKV PLATG+A DVHGQLTVLNK +      LRNR+ NF 
Sbjct: 185  YMDIERP-LSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQ 243

Query: 334  FKIKESSVDYFYPGSR 287
            F IKE+  ++FY GSR
Sbjct: 244  FYIKENGTEFFYSGSR 259


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