BLASTX nr result

ID: Coptis21_contig00001087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001087
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166461.1| PREDICTED: LOW QUALITY PROTEIN: actin-101-li...    69   5e-10
ref|XP_004147353.1| PREDICTED: actin-7-like [Cucumis sativus] gi...    69   5e-10
gb|ADV04491.1| beta-actin [Camellia sinensis]                          69   5e-10
gb|AAW63030.1| actin [Isatis tinctoria]                                69   5e-10
gb|AAP73459.1| actin [Gossypium hirsutum]                              69   5e-10

>ref|XP_004166461.1| PREDICTED: LOW QUALITY PROTEIN: actin-101-like [Cucumis sativus]
          Length = 107

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = -1

Query: 255 GGSILASLSTFQQMWISKGEYDESGPSIVHRK 160
           GGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 74  GGSILASLSTFQQMWISKGEYDESGPSIVHRK 105


>ref|XP_004147353.1| PREDICTED: actin-7-like [Cucumis sativus]
           gi|449461823|ref|XP_004148641.1| PREDICTED: actin-7-like
           [Cucumis sativus] gi|449532903|ref|XP_004173417.1|
           PREDICTED: actin-7-like [Cucumis sativus]
          Length = 377

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = -1

Query: 255 GGSILASLSTFQQMWISKGEYDESGPSIVHRK 160
           GGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 344 GGSILASLSTFQQMWISKGEYDESGPSIVHRK 375


>gb|ADV04491.1| beta-actin [Camellia sinensis]
          Length = 377

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = -1

Query: 255 GGSILASLSTFQQMWISKGEYDESGPSIVHRK 160
           GGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 344 GGSILASLSTFQQMWISKGEYDESGPSIVHRK 375


>gb|AAW63030.1| actin [Isatis tinctoria]
          Length = 377

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = -1

Query: 255 GGSILASLSTFQQMWISKGEYDESGPSIVHRK 160
           GGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 344 GGSILASLSTFQQMWISKGEYDESGPSIVHRK 375


>gb|AAP73459.1| actin [Gossypium hirsutum]
          Length = 377

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = -1

Query: 255 GGSILASLSTFQQMWISKGEYDESGPSIVHRK 160
           GGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 344 GGSILASLSTFQQMWISKGEYDESGPSIVHRK 375


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