BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001083
         (1466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   504   e-140
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              504   e-140
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   504   e-140
ref|XP_002525113.1| splicing factor u2af large subunit, putative...   499   e-139
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...   497   e-138

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  504 bits (1299), Expect = e-140
 Identities = 260/303 (85%), Positives = 268/303 (88%)
 Frame = +3

Query: 276  MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 455
            M   +FPL++G  F  LPVMPVQAMTQQATRHARRVYVGGLSP+ANEQSVATFFSQVMSA
Sbjct: 202  MFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSA 260

Query: 456  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 635
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 261  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 320

Query: 636  SLAAALGPSQPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 815
            SLAA LGPSQPNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGPL
Sbjct: 321  SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 380

Query: 816  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 995
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE
Sbjct: 381  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 440

Query: 996  QETXXXXXXXXXXXXXXXFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 1175
            QE                FQ  PG L T+VVCLTQVV+ADEL+DD+ YEDIVEDMR E  
Sbjct: 441  QENVLLHAQQQIALQRLMFQ--PGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGG 498

Query: 1176 KFG 1184
            KFG
Sbjct: 499  KFG 501


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  504 bits (1299), Expect = e-140
 Identities = 260/303 (85%), Positives = 268/303 (88%)
 Frame = +3

Query: 276  MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 455
            M   +FPL++G  F  LPVMPVQAMTQQATRHARRVYVGGLSP+ANEQSVATFFSQVMSA
Sbjct: 27   MFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSA 85

Query: 456  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 635
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 86   IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 145

Query: 636  SLAAALGPSQPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 815
            SLAA LGPSQPNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGPL
Sbjct: 146  SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 205

Query: 816  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 995
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE
Sbjct: 206  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 265

Query: 996  QETXXXXXXXXXXXXXXXFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 1175
            QE                FQ  PG L T+VVCLTQVV+ADEL+DD+ YEDIVEDMR E  
Sbjct: 266  QENVLLHAQQQIALQRLMFQ--PGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGG 323

Query: 1176 KFG 1184
            KFG
Sbjct: 324  KFG 326


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  504 bits (1299), Expect = e-140
 Identities = 260/303 (85%), Positives = 268/303 (88%)
 Frame = +3

Query: 276  MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 455
            M   +FPL++G  F  LPVMPVQAMTQQATRHARRVYVGGLSP+ANEQSVATFFSQVMSA
Sbjct: 199  MFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSA 257

Query: 456  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 635
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 258  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 317

Query: 636  SLAAALGPSQPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 815
            SLAA LGPSQPNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGPL
Sbjct: 318  SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 377

Query: 816  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 995
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE
Sbjct: 378  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 437

Query: 996  QETXXXXXXXXXXXXXXXFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 1175
            QE                FQ  PG L T+VVCLTQVV+ADEL+DD+ YEDIVEDMR E  
Sbjct: 438  QENVLLHAQQQIALQRLMFQ--PGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGG 495

Query: 1176 KFG 1184
            KFG
Sbjct: 496  KFG 498


>ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
            gi|223535572|gb|EEF37240.1| splicing factor u2af large
            subunit, putative [Ricinus communis]
          Length = 549

 Score =  499 bits (1284), Expect(2) = e-139
 Identities = 255/302 (84%), Positives = 264/302 (87%)
 Frame = +3

Query: 276  MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 455
            M   +FPL TG  F TLPVMPVQAMTQQATRHARRVYVGGL P+ANEQSVATFFS VM+A
Sbjct: 223  MFPNMFPLGTGQQFGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMAA 282

Query: 456  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 635
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 283  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 342

Query: 636  SLAAALGPSQPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 815
            SLAA LGPSQPNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGPL
Sbjct: 343  SLAATLGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 402

Query: 816  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 995
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA+QPKPE
Sbjct: 403  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 462

Query: 996  QETXXXXXXXXXXXXXXXFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 1175
            QET                Q     +PT+VVCLTQVV+ADEL+DD EYEDI+EDMR E  
Sbjct: 463  QETVLLHAQQQIALQRLMLQ----PVPTKVVCLTQVVTADELKDDDEYEDILEDMRTEGG 518

Query: 1176 KF 1181
            KF
Sbjct: 519  KF 520



 Score = 26.2 bits (56), Expect(2) = e-139
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 1297 FTACWPPFCYKESGLNH 1347
            F  C   FCYKESGL +
Sbjct: 520  FAFCSATFCYKESGLTY 536


>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
            sativus]
          Length = 587

 Score =  497 bits (1279), Expect = e-138
 Identities = 251/303 (82%), Positives = 267/303 (88%)
 Frame = +3

Query: 276  MLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMSA 455
            M  T+FPL+TG  F  LPVMPVQAMTQQATRHARRVYVGGL P+ANEQSVATFFSQVM+A
Sbjct: 221  MFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 280

Query: 456  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 635
            IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP
Sbjct: 281  IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 340

Query: 636  SLAAALGPSQPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 815
            SLAA LGPSQPNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE Q+RELLESFGPL
Sbjct: 341  SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 400

Query: 816  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPE 995
            RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA+QPKPE
Sbjct: 401  RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 460

Query: 996  QETXXXXXXXXXXXXXXXFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVEDMREESR 1175
            QE+                Q  PG + T+V+CLTQVV+ +EL +D++YEDI+EDMR E  
Sbjct: 461  QESVLLHAQQQIALQKLMLQ--PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGG 518

Query: 1176 KFG 1184
            KFG
Sbjct: 519  KFG 521