BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001081
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265...   149   1e-33
ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|2...   137   3e-30
ref|XP_004147401.1| PREDICTED: cold-regulated 413 inner membrane...   133   6e-29
ref|XP_002893559.1| predicted protein [Arabidopsis lyrata subsp....   133   6e-29
ref|NP_564327.1| cold regulated 314 thylakoid membrane 2 [Arabid...   132   1e-28

>ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265908 [Vitis vinifera]
           gi|297740634|emb|CBI30816.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  149 bits (375), Expect = 1e-33
 Identities = 94/197 (47%), Positives = 112/197 (56%), Gaps = 2/197 (1%)
 Frame = -1

Query: 676 KNILSLQNPKFIGSSNKTQLSWQRSSTNYPMMNK--RGSCGVVCSYSSPFTIHTLQWVST 503
           K  LSLQ+P         +    R   N+ ++ K  R   G VC YS+P T   LQWV T
Sbjct: 17  KPFLSLQSPPHQAKLFSLRFHHLRFQGNHGVVMKKNRRGFGAVC-YSAPLTPPNLQWVCT 75

Query: 502 ISSVVLVFAKGTAAPKSFLVPIFALQAPTSVISWIKGEYGXXXXXXXXXXXXXXXFPGEL 323
           +SS VL+ ++GTAA KSFLVP+FALQAPTS+ISWIKGEYG                PGEL
Sbjct: 76  VSSAVLMLSRGTAAQKSFLVPLFALQAPTSIISWIKGEYGAWTAFLALLVRLFFFIPGEL 135

Query: 322 ELPFMALLLVIVSPYQVMDLRXXXXXXXXXXXXXXXXXXXXQHFSRLGSLRKAFDQGSXX 143
           ELPF+ALLLVIV+PYQVM+LR                    QHFSR GSL++AF+QGS  
Sbjct: 136 ELPFVALLLVIVAPYQVMNLR--GTQMGAIVSLLIAGYLAFQHFSRAGSLQRAFNQGSIV 193

Query: 142 XXXXXXXXXXVSCLLLI 92
                     VSCLL I
Sbjct: 194 ATLAIICITAVSCLLFI 210


>ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|222875388|gb|EEF12519.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  137 bits (345), Expect = 3e-30
 Identities = 93/208 (44%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
 Frame = -1

Query: 676 KNILSLQNPKF------IGSSNKTQLSWQRSSTNYPMMNK-------RGSCGVVCSYSSP 536
           K  LS+QNP        + SS  T    + S  +  MM K       RG  G VC ++  
Sbjct: 26  KQFLSIQNPLRSPTVTPLSSSFTTFNPLRLSIKSNEMMMKIKRKESGRGF-GAVC-HAGS 83

Query: 535 FTIHTLQWVSTISSVVLVFAKGTAAPKSFLVPIFALQAPTSVISWIKGEYGXXXXXXXXX 356
            T  +L W+S +SS VLV AKGTA  KSFLVP+FALQAP +VISWIKGEYG         
Sbjct: 84  LTTPSLPWISALSSAVLVLAKGTAVQKSFLVPLFALQAPPAVISWIKGEYGIWTAFLALL 143

Query: 355 XXXXXXFPGELELPFMALLLVIVSPYQVMDLRXXXXXXXXXXXXXXXXXXXXQHFSRLGS 176
                  PGELELPFMALLLVIV+PYQVM++R                    QHFSR+G+
Sbjct: 144 FRLFFFIPGELELPFMALLLVIVAPYQVMNIR--GKQEGAIVGLVIAAYLAFQHFSRIGN 201

Query: 175 LRKAFDQGSXXXXXXXXXXXXVSCLLLI 92
           +++AF+QGS             SCLLLI
Sbjct: 202 MQRAFEQGSVVATIAVVCVVVTSCLLLI 229


>ref|XP_004147401.1| PREDICTED: cold-regulated 413 inner membrane protein 2,
           chloroplastic-like [Cucumis sativus]
           gi|449500602|ref|XP_004161143.1| PREDICTED:
           cold-regulated 413 inner membrane protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 224

 Score =  133 bits (334), Expect = 6e-29
 Identities = 77/147 (52%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
 Frame = -1

Query: 583 MNKRGSCGV--VCSYSSPFTIHTLQWVSTISSVVLVFAKGTAAPKSFLVPIFALQAPTSV 410
           +NK+ S G+  VC Y+ P    TLQW+STISSVVL+ AKGT   KSF+VP+FALQAP SV
Sbjct: 62  INKKKSRGLSAVC-YAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASV 120

Query: 409 ISWIKGEYGXXXXXXXXXXXXXXXFPGELELPFMALLLVIVSPYQVMDLRXXXXXXXXXX 230
           ISWIKGEYG                PGELE+PF++LLLVIV+PYQV +LR          
Sbjct: 121 ISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLR--GTQEGCII 178

Query: 229 XXXXXXXXXXQHFSRLGSLRKAFDQGS 149
                     QHFSR GS ++AFDQ S
Sbjct: 179 SLLIAAYLAFQHFSRAGSFQRAFDQNS 205


>ref|XP_002893559.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339401|gb|EFH69818.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score =  133 bits (334), Expect = 6e-29
 Identities = 77/151 (50%), Positives = 91/151 (60%)
 Frame = -1

Query: 601 STNYPMMNKRGSCGVVCSYSSPFTIHTLQWVSTISSVVLVFAKGTAAPKSFLVPIFALQA 422
           ST      KRGS  VVC  +   ++  LQW+STIS V L+FA+GT   KSF+VP+FALQA
Sbjct: 258 STRVEKRRKRGS-SVVCYATPMLSVQNLQWISTISCVALMFARGTGIHKSFVVPLFALQA 316

Query: 421 PTSVISWIKGEYGXXXXXXXXXXXXXXXFPGELELPFMALLLVIVSPYQVMDLRXXXXXX 242
           P  +ISW+KGEYG               FPGELELPF+ALLLVIV+PYQVM +R      
Sbjct: 317 PLGIISWMKGEYGIWAAFLALLTRLFFAFPGELELPFIALLLVIVAPYQVMSIR--GKQE 374

Query: 241 XXXXXXXXXXXXXXQHFSRLGSLRKAFDQGS 149
                         QHFSR GSL+KAFDQ S
Sbjct: 375 GAILSLAISCFLAFQHFSRAGSLQKAFDQSS 405



 Score =  129 bits (325), Expect = 7e-28
 Identities = 75/154 (48%), Positives = 98/154 (63%)
 Frame = -1

Query: 610 QRSSTNYPMMNKRGSCGVVCSYSSPFTIHTLQWVSTISSVVLVFAKGTAAPKSFLVPIFA 431
           QR+ST    + KR    VVC Y++P ++ +LQW+STIS + L+ A+GTA  KS +VP+FA
Sbjct: 54  QRTSTVSARVEKRRK-SVVC-YAAPISVDSLQWISTISCLALMLARGTAIHKSVVVPLFA 111

Query: 430 LQAPTSVISWIKGEYGXXXXXXXXXXXXXXXFPGELELPFMALLLVIVSPYQVMDLRXXX 251
           L AP+S+I+WIKGEYG               FPGELELPF+ALLLVIV+PYQVM++R   
Sbjct: 112 LHAPSSIITWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIR--G 169

Query: 250 XXXXXXXXXXXXXXXXXQHFSRLGSLRKAFDQGS 149
                            QHFSR GSL KA+++GS
Sbjct: 170 KQEGAIISIAISCFLAFQHFSRAGSLEKAYEKGS 203


>ref|NP_564327.1| cold regulated 314 thylakoid membrane 2 [Arabidopsis thaliana]
           gi|426019472|sp|F4I1G5.1|CRIM2_ARATH RecName:
           Full=Cold-regulated 413 inner membrane protein 2,
           chloroplastic; Short=AtCOR413-IM2; AltName:
           Full=Cold-regulated 413 thylakoid membrane 2;
           Short=AtCOR413-TM2; Flags: Precursor
           gi|332192959|gb|AEE31080.1| cold regulated 314 thylakoid
           membrane 2 [Arabidopsis thaliana]
          Length = 226

 Score =  132 bits (332), Expect = 1e-28
 Identities = 88/206 (42%), Positives = 107/206 (51%), Gaps = 5/206 (2%)
 Frame = -1

Query: 694 KTSPPLKNILSLQNPKFIGSSNKTQLSWQRSST-----NYPMMNKRGSCGVVCSYSSPFT 530
           K  P   NI  L +   +   N  +LS  R  T           KRGS  VVC  +   +
Sbjct: 24  KLRPRPSNISGLGHSTSVVCFNPLRLSADRQRTATVSARAEKRRKRGS-SVVCYATPMLS 82

Query: 529 IHTLQWVSTISSVVLVFAKGTAAPKSFLVPIFALQAPTSVISWIKGEYGXXXXXXXXXXX 350
           +H LQW+STIS V L+FA+GT   KSF+VP+FALQAP  ++SW+KGEYG           
Sbjct: 83  VHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAPMGIVSWMKGEYGIWAAFLALLTR 142

Query: 349 XXXXFPGELELPFMALLLVIVSPYQVMDLRXXXXXXXXXXXXXXXXXXXXQHFSRLGSLR 170
               FP ELELPF+ALLLVIV+PYQVM +R                    QHFSR G+L+
Sbjct: 143 LFFSFPVELELPFIALLLVIVAPYQVMSIR--GKQEGAILSLAISCFLAFQHFSRAGTLQ 200

Query: 169 KAFDQGSXXXXXXXXXXXXVSCLLLI 92
           KAFDQ S            VS L LI
Sbjct: 201 KAFDQNSVLATVAIIGVTVVSFLFLI 226