BLASTX nr result

ID: Coptis21_contig00001060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001060
         (1762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269144.1| PREDICTED: uncharacterized protein LOC100248...   293   1e-76
ref|XP_002312704.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
ref|XP_002520157.1| conserved hypothetical protein [Ricinus comm...   284   6e-74
emb|CBI32031.3| unnamed protein product [Vitis vinifera]              274   5e-71
ref|XP_002312779.1| predicted protein [Populus trichocarpa] gi|2...   255   2e-65

>ref|XP_002269144.1| PREDICTED: uncharacterized protein LOC100248339 [Vitis vinifera]
          Length = 444

 Score =  293 bits (750), Expect = 1e-76
 Identities = 164/358 (45%), Positives = 215/358 (60%), Gaps = 23/358 (6%)
 Frame = +2

Query: 137  STTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDE 316
            ++  TDGPV+S +NKRLR L+KKYN+I Q+EEA +QGKPINK+QE+VL++KP++  LIDE
Sbjct: 3    ASDVTDGPVLSLINKRLRGLRKKYNRITQMEEAIAQGKPINKEQEDVLRSKPAVTVLIDE 62

Query: 317  YEKLRQPLYTVVQEEVFL----NNKPXXXXXXXXXXXXXXXXXXXXX------------- 445
             E+LRQPL   V+EE+ L    N+ P                                  
Sbjct: 63   LERLRQPLSAAVEEELSLALQSNHLPPSPPPQPSSIINKDGADDGEEKPESDHLNVENLL 122

Query: 446  ---YFSCLFDVKQQSDFTSTMLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLV 616
               YF  LFDVK Q+DFTSTMLTRTHERGCCLTYDYVT             +IS L GL+
Sbjct: 123  NLLYFGYLFDVKPQTDFTSTMLTRTHERGCCLTYDYVTDDATDLLGERDLDLISQLSGLL 182

Query: 617  VSRPVNSSLSHKNALRSCVEHAKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTS 796
            +SRPV+SSLSHKNAL+ C+EHA+LWL NSD+ I+    +TY GLRE+L KI+ASDYFTT+
Sbjct: 183  ISRPVDSSLSHKNALQRCIEHARLWLANSDRPIEPDATVTYAGLREKLNKIMASDYFTTT 242

Query: 797  PEMKXXXXXXXXXGKYAPSNVAXXXXXXXXXXXXXXXXDFVQYEQKDEETENFEGQEAGA 976
            PEMK            A + V+                   QY+QKDE+  N +G E G 
Sbjct: 243  PEMKAPVEVAAAAA--AGNYVSFQVPLHSSVVPVQVEGSIAQYQQKDEDNSNVQGHETGD 300

Query: 977  EQSIPIEELSKDESDMVNAVENISDDKPEADGEGQ---NTRDMESKDHQYGQRRDYHN 1141
            +QS P+EEL +DE ++ N  E +S  + +A  + +   +  D+ESK+ QY  RR+Y N
Sbjct: 301  DQSSPVEELHQDELEIENPAEVVSVQQEQAKQQAEVEWSQGDVESKE-QYVPRRNYQN 357


>ref|XP_002312704.1| predicted protein [Populus trichocarpa] gi|222852524|gb|EEE90071.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  288 bits (738), Expect = 2e-75
 Identities = 162/352 (46%), Positives = 204/352 (57%), Gaps = 21/352 (5%)
 Frame = +2

Query: 149  TDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDEYEKL 328
            T+GPV+S + KRLR LKKK+N+I+Q+EE+ +QGKPINK+QE+ L++KPS+   IDE EKL
Sbjct: 10   TEGPVLSLITKRLRGLKKKFNRIVQMEESIAQGKPINKEQEDFLRSKPSVAAAIDELEKL 69

Query: 329  RQPLYTVVQEEVFLN----NKPXXXXXXXXXXXXXXXXXXXXXYFSCLFDVKQQSDFTST 496
            RQPL   V EE+ L     N                       YF CLFDV+ Q+DFT+T
Sbjct: 70   RQPLSVAVSEEIELAAHRLNPKSDSTVVPEASNGVVEDLLHLFYFGCLFDVRSQNDFTAT 129

Query: 497  MLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGG-LVVSRPVNSSLSHKNALRSCV 673
            MLTRTHERGCCLTYDYVT             +IS+LGG L++SRPVNSSLSHKNAL+ C+
Sbjct: 130  MLTRTHERGCCLTYDYVTDDATDLLSERDLDMISILGGGLIISRPVNSSLSHKNALQRCM 189

Query: 674  EHAKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMKXXXXXXXXXGKYAPS 853
            EHAKLWL NSD+ ID    ++Y  LRE+L KI+ASDYFTT+PE+K         G Y P 
Sbjct: 190  EHAKLWLANSDQPIDSNVNVSYAELREKLNKIMASDYFTTTPEIKAPVEMAAAAGNYVPF 249

Query: 854  NVAXXXXXXXXXXXXXXXXDFVQYEQKDEETENFEGQEAGAEQSIPIEELSKDESDMVNA 1033
             V                    QY+ K++ETEN +  E G +QS P EEL KDE +  N 
Sbjct: 250  QV--------PFSVHMDEDSVAQYQPKEQETENIQ-HETGDDQSSPAEELQKDEQETENP 300

Query: 1034 V---ENISDDKPEADGE-------------GQNTRDMESKDHQYGQRRDYHN 1141
                +    D P  + E               N R+ E K+ QY  RR+Y N
Sbjct: 301  AVVSDQEEQDNPSTEVEVYYNQREVEHGEVDHNQREAEPKEQQYVSRRNYQN 352


>ref|XP_002520157.1| conserved hypothetical protein [Ricinus communis]
            gi|223540649|gb|EEF42212.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 440

 Score =  284 bits (726), Expect = 6e-74
 Identities = 173/434 (39%), Positives = 225/434 (51%), Gaps = 18/434 (4%)
 Frame = +2

Query: 137  STTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDE 316
            S+  T+GPV++ +NKRLRAL+KKYN+I+Q+EE+ SQGKPINK+QE+VL++KP +   I+E
Sbjct: 6    SSEATEGPVLNLINKRLRALRKKYNRIIQMEESISQGKPINKEQEDVLRSKPYVTASIEE 65

Query: 317  YEKLRQPLYTVVQEEVFL------------NNKPXXXXXXXXXXXXXXXXXXXXXYFSCL 460
             EKL+QPL   V EE+ L            +                        YF  L
Sbjct: 66   LEKLKQPLSVAVSEEIDLAIQRQQQQSSSSDRTTNEANGDSNGGGLAIEDLLNLLYFGSL 125

Query: 461  FDVKQQSDFTSTMLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLVVSRPVNSS 640
            FDVK Q++FT+TMLTRTHERGCCLTYDYVT             +IS LG L++SRPV+SS
Sbjct: 126  FDVKSQNEFTATMLTRTHERGCCLTYDYVTDDATDLLGERDLDMISKLGALLISRPVDSS 185

Query: 641  LSHKNALRSCVEHAKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMK--XX 814
            LSHKNAL  C+EHAKLWL NSD+ ID    ++Y GLRERL KI+ASDYF T+PEMK    
Sbjct: 186  LSHKNALVKCIEHAKLWLSNSDQFIDPIANVSYSGLRERLNKIMASDYFITTPEMKAPVE 245

Query: 815  XXXXXXXGKYAPSNVAXXXXXXXXXXXXXXXXDFVQYEQKDEETENFEGQEAGAEQSIPI 994
                   G YA   V                 D  ++ +++E+T NF+G E+G +QS P 
Sbjct: 246  VAAAAAAGNYASFQVPVHGVGPISVPVQVEGSD--EHYEENEDTGNFQGHESGDDQSNPA 303

Query: 995  EELSKDESDMVNAVENISDDK-PEADGEGQN-TRDMESKDHQYGQRRDYHNXXXXXXXXX 1168
            EE  KD+ + V   E +S +K  E   E  N  ++++ K+ QY  RR+Y N         
Sbjct: 304  EEFHKDDPETVVPAEEVSGEKEQEKPLEVDNIQKEVDPKEQQYFARRNYQNQRGGRGGNG 363

Query: 1169 XXXXXXXXXXXXXXXXXXXXXXXXXXXH-YDQXXXXXXXXXXXXXXXXXXXXXXXAFNNH 1345
                                         YDQ                        +NNH
Sbjct: 364  GGRRGYSNGRGGRSSGRGGGGYQNGRNQFYDQSGNYYQRNYYNNRGRGGGRGGGHPYNNH 423

Query: 1346 GSA-QGGHAPADEG 1384
            GSA  GGH PA  G
Sbjct: 424  GSAVHGGHGPAGVG 437


>emb|CBI32031.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  274 bits (701), Expect = 5e-71
 Identities = 154/338 (45%), Positives = 205/338 (60%), Gaps = 3/338 (0%)
 Frame = +2

Query: 137  STTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDE 316
            ++  TDGPV+S +NKRLR L+KKYN+I Q+EEA +QGKPINK+QE+VL++KP++    D+
Sbjct: 3    ASDVTDGPVLSLINKRLRGLRKKYNRITQMEEAIAQGKPINKEQEDVLRSKPAVTDGADD 62

Query: 317  YEKLRQPLYTVVQEEVFLNNKPXXXXXXXXXXXXXXXXXXXXXYFSCLFDVKQQSDFTST 496
             E+  +P    +  E  LN                        YF  LFDVK Q+DFTST
Sbjct: 63   GEE--KPESDHLNVENLLN----------------------LLYFGYLFDVKPQTDFTST 98

Query: 497  MLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLVVSRPVNSSLSHKNALRSCVE 676
            MLTRTHERGCCLTYDYVT             +IS L GL++SRPV+SSLSHKNAL+ C+E
Sbjct: 99   MLTRTHERGCCLTYDYVTDDATDLLGERDLDLISQLSGLLISRPVDSSLSHKNALQRCIE 158

Query: 677  HAKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMKXXXXXXXXXGKYAPSN 856
            HA+LWL NSD+ I+    +TY GLRE+L KI+ASDYFTT+PEMK            A + 
Sbjct: 159  HARLWLANSDRPIEPDATVTYAGLREKLNKIMASDYFTTTPEMKAPVEVAAAAA--AGNY 216

Query: 857  VAXXXXXXXXXXXXXXXXDFVQYEQKDEETENFEGQEAGAEQSIPIEELSKDESDMVNAV 1036
            V+                   QY+QKDE+  N +G E G +QS P+EEL +DE ++ N  
Sbjct: 217  VSFQVPLHSSVVPVQVEGSIAQYQQKDEDNSNVQGHETGDDQSSPVEELHQDELEIENPA 276

Query: 1037 ENISDDKPEADGEGQ---NTRDMESKDHQYGQRRDYHN 1141
            E +S  + +A  + +   +  D+ESK+ QY  RR+Y N
Sbjct: 277  EVVSVQQEQAKQQAEVEWSQGDVESKE-QYVPRRNYQN 313


>ref|XP_002312779.1| predicted protein [Populus trichocarpa] gi|222852599|gb|EEE90146.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  255 bits (652), Expect = 2e-65
 Identities = 132/240 (55%), Positives = 159/240 (66%), Gaps = 4/240 (1%)
 Frame = +2

Query: 152 DGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDEYEKLR 331
           DGPV+S + KRLRALKKK+N+ILQ+EE+ +QGKPINK+QE+ L++KPS+   IDE EKLR
Sbjct: 11  DGPVLSLITKRLRALKKKHNRILQMEESIAQGKPINKEQEDFLRSKPSVSAAIDELEKLR 70

Query: 332 QPLYTVVQEEVFLN----NKPXXXXXXXXXXXXXXXXXXXXXYFSCLFDVKQQSDFTSTM 499
           QPL   V EE+ L     N                       YF  LFDVK Q+DFT+TM
Sbjct: 71  QPLSIAVSEEIELAAHRLNPKSDSTVVPEASDEMLEDLLHLLYFGSLFDVKSQNDFTATM 130

Query: 500 LTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLVVSRPVNSSLSHKNALRSCVEH 679
           LTRTHERGCCLTYDYVT             +IS+LGGL++SRP N+SLSHKNAL+ C+EH
Sbjct: 131 LTRTHERGCCLTYDYVTDDATDLLGERDLDMISMLGGLLISRPGNTSLSHKNALQRCMEH 190

Query: 680 AKLWLENSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMKXXXXXXXXXGKYAPSNV 859
           AKLWL NSD+ ID    ++Y  LRERL KI+ASDYFTT+PEMK         G Y P  V
Sbjct: 191 AKLWLANSDQPIDSTANVSYAELRERLNKIMASDYFTTTPEMKAPVEVAAAAGNYVPFQV 250


Top