BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001059
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275749.2| PREDICTED: ferredoxin-3, chloroplastic-like ...   224   1e-56
emb|CAN74125.1| hypothetical protein VITISV_038770 [Vitis vinifera]   221   8e-56
ref|XP_002267623.2| PREDICTED: uncharacterized protein LOC100266...   214   8e-54
emb|CBI18580.3| unnamed protein product [Vitis vinifera]              214   8e-54
ref|XP_002523809.1| Ferredoxin-3, chloroplast precursor, putativ...   213   1e-53

>ref|XP_002275749.2| PREDICTED: ferredoxin-3, chloroplastic-like isoform 1 [Vitis
           vinifera]
          Length = 154

 Score =  224 bits (570), Expect = 1e-56
 Identities = 107/141 (75%), Positives = 124/141 (87%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 VSMSTVSLPSACMIKSGGQSRITGALVKRPSSLGSIKSVSKGFGLKTSS-FRVSAMAVYK 245
           V MSTV+LP+ CM +S  Q+RI  A ++ PSSLGS+KS+SK FGLK+S  FR +AMAVYK
Sbjct: 2   VIMSTVNLPTHCMFRSATQNRIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYK 61

Query: 244 VKLIGPEGEENEFEAPDDCYILDSAENAGLELPYSCRAGACSTCAGHMVKGAVDQSDGSF 65
           +KLIGPEGEE+EF+APDD YILDSAENAG+ELPYSCRAGACSTCAG MV G+VDQSDGSF
Sbjct: 62  IKLIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTCAGQMVSGSVDQSDGSF 121

Query: 64  LDDNQMEKGYVLTCVSYPTSD 2
           LDD QMEKGY+LTC+SYPTSD
Sbjct: 122 LDDKQMEKGYLLTCISYPTSD 142


>emb|CAN74125.1| hypothetical protein VITISV_038770 [Vitis vinifera]
          Length = 151

 Score =  221 bits (562), Expect = 8e-56
 Identities = 105/139 (75%), Positives = 122/139 (87%), Gaps = 1/139 (0%)
 Frame = -3

Query: 415 MSTVSLPSACMIKSGGQSRITGALVKRPSSLGSIKSVSKGFGLKTSS-FRVSAMAVYKVK 239
           MSTV+LP+ CM +S  Q+ I  A ++ PSSLGS+KS+SK FGLK+S  FR +AMAVYK+K
Sbjct: 1   MSTVNLPTHCMFRSATQNXIASAFIRSPSSLGSVKSISKAFGLKSSPCFRATAMAVYKIK 60

Query: 238 LIGPEGEENEFEAPDDCYILDSAENAGLELPYSCRAGACSTCAGHMVKGAVDQSDGSFLD 59
           LIGPEGEE+EF+APDD YILDSAENAG+ELPYSCRAGACSTCAG MV G+VDQSDGSFLD
Sbjct: 61  LIGPEGEEHEFDAPDDAYILDSAENAGVELPYSCRAGACSTCAGQMVSGSVDQSDGSFLD 120

Query: 58  DNQMEKGYVLTCVSYPTSD 2
           D QMEKGY+LTC+SYPTSD
Sbjct: 121 DKQMEKGYLLTCISYPTSD 139


>ref|XP_002267623.2| PREDICTED: uncharacterized protein LOC100266537 [Vitis vinifera]
          Length = 351

 Score =  214 bits (545), Expect = 8e-54
 Identities = 106/140 (75%), Positives = 122/140 (87%)
 Frame = -3

Query: 421 VSMSTVSLPSACMIKSGGQSRITGALVKRPSSLGSIKSVSKGFGLKTSSFRVSAMAVYKV 242
           V+MSTVSLP+  + KS    + + AL++ P SLGS++S SK FGLK+SSFRVSAMAVYKV
Sbjct: 201 VNMSTVSLPTPFLFKSAPLKK-SCALIRSPGSLGSVRSTSKAFGLKSSSFRVSAMAVYKV 259

Query: 241 KLIGPEGEENEFEAPDDCYILDSAENAGLELPYSCRAGACSTCAGHMVKGAVDQSDGSFL 62
           KLIGP+GEE+EF+APDD YILDSAENAGLELPYSCRAGACSTCAG MV G+VDQSDGSFL
Sbjct: 260 KLIGPDGEESEFDAPDDVYILDSAENAGLELPYSCRAGACSTCAGQMVLGSVDQSDGSFL 319

Query: 61  DDNQMEKGYVLTCVSYPTSD 2
           D+ QM+ GYVLTCVSYPTSD
Sbjct: 320 DEKQMDNGYVLTCVSYPTSD 339


>emb|CBI18580.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score =  214 bits (545), Expect = 8e-54
 Identities = 106/140 (75%), Positives = 122/140 (87%)
 Frame = -3

Query: 421 VSMSTVSLPSACMIKSGGQSRITGALVKRPSSLGSIKSVSKGFGLKTSSFRVSAMAVYKV 242
           V+MSTVSLP+  + KS    + + AL++ P SLGS++S SK FGLK+SSFRVSAMAVYKV
Sbjct: 18  VNMSTVSLPTPFLFKSAPLKK-SCALIRSPGSLGSVRSTSKAFGLKSSSFRVSAMAVYKV 76

Query: 241 KLIGPEGEENEFEAPDDCYILDSAENAGLELPYSCRAGACSTCAGHMVKGAVDQSDGSFL 62
           KLIGP+GEE+EF+APDD YILDSAENAGLELPYSCRAGACSTCAG MV G+VDQSDGSFL
Sbjct: 77  KLIGPDGEESEFDAPDDVYILDSAENAGLELPYSCRAGACSTCAGQMVLGSVDQSDGSFL 136

Query: 61  DDNQMEKGYVLTCVSYPTSD 2
           D+ QM+ GYVLTCVSYPTSD
Sbjct: 137 DEKQMDNGYVLTCVSYPTSD 156


>ref|XP_002523809.1| Ferredoxin-3, chloroplast precursor, putative [Ricinus communis]
           gi|223536897|gb|EEF38535.1| Ferredoxin-3, chloroplast
           precursor, putative [Ricinus communis]
          Length = 150

 Score =  213 bits (543), Expect = 1e-53
 Identities = 100/138 (72%), Positives = 121/138 (87%)
 Frame = -3

Query: 415 MSTVSLPSACMIKSGGQSRITGALVKRPSSLGSIKSVSKGFGLKTSSFRVSAMAVYKVKL 236
           M+TV +PS CM+K+  +S++T  ++K PSSLGS++S+SK FGLK S    ++MAVYKVKL
Sbjct: 1   MATVRVPSQCMLKTAPKSQLTSTIIKSPSSLGSVRSISKSFGLKCSQNFKASMAVYKVKL 60

Query: 235 IGPEGEENEFEAPDDCYILDSAENAGLELPYSCRAGACSTCAGHMVKGAVDQSDGSFLDD 56
           IGP+GEENEFEA DD YILD+AENAG+ELPYSCRAGACSTCAG MV GAVDQSDGSFLD+
Sbjct: 61  IGPDGEENEFEASDDTYILDAAENAGVELPYSCRAGACSTCAGKMVSGAVDQSDGSFLDE 120

Query: 55  NQMEKGYVLTCVSYPTSD 2
           NQME+GY+LTCVSYPT+D
Sbjct: 121 NQMEEGYLLTCVSYPTAD 138