BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001052
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   471   e-130
ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   461   e-127
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   449   e-124
ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Gly...   449   e-124
ref|XP_003550322.1| PREDICTED: F-box protein At1g47056-like [Gly...   447   e-123

>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
            skip-2, putative [Ricinus communis]
          Length = 536

 Score =  471 bits (1212), Expect = e-130
 Identities = 226/307 (73%), Positives = 267/307 (86%)
 Frame = -2

Query: 1259 KLSVGSCNFGAKGMNAVIYNCSMLEQLSVKRLRGIKKGAGSDLIGPGVAAGSLKTICLKE 1080
            KLS GSC FGAKGMNAV+ NC+ LE+LS+KRLRGI  GA ++ IGPG+AA SLKTICLKE
Sbjct: 173  KLSCGSCTFGAKGMNAVLDNCASLEELSIKRLRGITDGAAAEPIGPGLAANSLKTICLKE 232

Query: 1079 LSNGQCFSPLIVGAKNLKTFKLFRCSGDWDRLLEMFAENVSCLVEVHLERLQVSDRGLGA 900
            L NGQCF PLI+G+KNL+T KLFRCSGDWD+LL++ ++ V+ +VE+HLERLQVSD GL A
Sbjct: 233  LYNGQCFGPLIIGSKNLRTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDVGLSA 292

Query: 899  VSNCLGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGSKMNRIGDEGLIAIARRCPN 720
            +SNCL LEILHLVKTPECTN+GL +IA+RCK LRKLHIDG K NRIGD+GLIA+A+ CPN
Sbjct: 293  ISNCLDLEILHLVKTPECTNLGLGSIAERCKLLRKLHIDGWKANRIGDDGLIAVAKNCPN 352

Query: 719  LKEVVLIDVNPTLLSLGLLAANCQNLERLALCGSETFGDAEISCIAANCGALRKLCIKGC 540
            L+E+VLI VNPT  SL +LA+NCQNLERLALCGS+T GDAEISCIAA C +L+KLCIK C
Sbjct: 353  LQELVLIGVNPTKSSLEMLASNCQNLERLALCGSDTVGDAEISCIAAKCISLKKLCIKSC 412

Query: 539  PVSDHGMEALAGGCPSLVKVKVRKCRGVTCEGVNWLRESRGSLAVNLDTGANEIPEDVAG 360
            PVSDHGMEALA GCP+LVKVKV+KCRGVTCEG +WLR SRGSLAVNLD+G +E  +  A 
Sbjct: 413  PVSDHGMEALASGCPNLVKVKVKKCRGVTCEGADWLRASRGSLAVNLDSGEHEHHDASAS 472

Query: 359  EGGLEEN 339
            +GG++EN
Sbjct: 473  DGGVQEN 479


>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
            gi|222835491|gb|EEE73926.1| f-box family protein [Populus
            trichocarpa]
          Length = 534

 Score =  461 bits (1186), Expect = e-127
 Identities = 221/308 (71%), Positives = 262/308 (85%)
 Frame = -2

Query: 1259 KLSVGSCNFGAKGMNAVIYNCSMLEQLSVKRLRGIKKGAGSDLIGPGVAAGSLKTICLKE 1080
            KLS GSC FGA+GMNA++ NC+ LE+LS+KRLRGI  GA ++ +GPG+AA SLKTICLKE
Sbjct: 172  KLSCGSCTFGARGMNAILDNCASLEELSLKRLRGITDGAAAEPVGPGLAAASLKTICLKE 231

Query: 1079 LSNGQCFSPLIVGAKNLKTFKLFRCSGDWDRLLEMFAENVSCLVEVHLERLQVSDRGLGA 900
            L NGQCF PLI+G+KNLKT KLFRCSGDWD+LL++ ++ V+ +VE+HLERLQVSD GL A
Sbjct: 232  LYNGQCFGPLIIGSKNLKTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDTGLAA 291

Query: 899  VSNCLGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGSKMNRIGDEGLIAIARRCPN 720
            +SNCL LEILHLVKTPECT+ GLV+IA+RC+ LRKLH+DG K NRIGD+GL A+A+ CPN
Sbjct: 292  ISNCLNLEILHLVKTPECTDTGLVSIAERCRLLRKLHVDGWKTNRIGDDGLSAVAKYCPN 351

Query: 719  LKEVVLIDVNPTLLSLGLLAANCQNLERLALCGSETFGDAEISCIAANCGALRKLCIKGC 540
            L+E+VLI VNPT +S+ LLA+NCQNLERLALCGS+T GDAEISCIAA C AL+KLCIK C
Sbjct: 352  LQELVLIGVNPTKISVELLASNCQNLERLALCGSDTVGDAEISCIAAKCVALKKLCIKSC 411

Query: 539  PVSDHGMEALAGGCPSLVKVKVRKCRGVTCEGVNWLRESRGSLAVNLDTGANEIPEDVAG 360
            PVSDHGMEALA GCP+LVKVKV+KCR VTCE  +WLR  RGSLAVNLD G  E  +  A 
Sbjct: 412  PVSDHGMEALANGCPNLVKVKVKKCRAVTCECADWLRTKRGSLAVNLDCGEPEHQDASAS 471

Query: 359  EGGLEENV 336
            +GGL ENV
Sbjct: 472  DGGLLENV 479


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
            gi|449515093|ref|XP_004164584.1| PREDICTED: F-box protein
            At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  449 bits (1155), Expect = e-124
 Identities = 223/308 (72%), Positives = 260/308 (84%)
 Frame = -2

Query: 1259 KLSVGSCNFGAKGMNAVIYNCSMLEQLSVKRLRGIKKGAGSDLIGPGVAAGSLKTICLKE 1080
            KLS GSC FGAKGMNAV+ NCS LE+LSVKRLRGI     ++ IGPG+A  SLKTICLK+
Sbjct: 172  KLSCGSCTFGAKGMNAVLDNCSALEELSVKRLRGITDST-AEPIGPGIAGSSLKTICLKD 230

Query: 1079 LSNGQCFSPLIVGAKNLKTFKLFRCSGDWDRLLEMFAENVSCLVEVHLERLQVSDRGLGA 900
            L N QCF PL++GAK+L+T KLFRCSGDWD LL + A+ V+ LVEVHLERLQVSD GL A
Sbjct: 231  LYNAQCFGPLLIGAKSLRTLKLFRCSGDWDALLRVIADRVTGLVEVHLERLQVSDVGLSA 290

Query: 899  VSNCLGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGSKMNRIGDEGLIAIARRCPN 720
            +SNCL LEILHLVKTPECTN+G+VA+A+RCK LRKLHIDG K NRIGDEGL+A+AR C N
Sbjct: 291  ISNCLDLEILHLVKTPECTNLGIVALAERCKLLRKLHIDGWKANRIGDEGLVAVARNCSN 350

Query: 719  LKEVVLIDVNPTLLSLGLLAANCQNLERLALCGSETFGDAEISCIAANCGALRKLCIKGC 540
            L+E+VLI VNPT +SL +LA+NC+NLERLALCGS+T GD+EISCIAA C AL+KLCIK C
Sbjct: 351  LQELVLIGVNPTKVSLEILASNCRNLERLALCGSDTVGDSEISCIAAKCIALKKLCIKSC 410

Query: 539  PVSDHGMEALAGGCPSLVKVKVRKCRGVTCEGVNWLRESRGSLAVNLDTGANEIPEDVAG 360
            PVSD GMEALA GCP+LVKVKV+KCRGVT EG + LR SRGSLAVNLD+G  E P+  A 
Sbjct: 411  PVSDQGMEALAEGCPNLVKVKVKKCRGVTPEGADSLRLSRGSLAVNLDSGEPEHPDASAS 470

Query: 359  EGGLEENV 336
            EGG+++NV
Sbjct: 471  EGGIQDNV 478


>ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Glycine max]
          Length = 549

 Score =  449 bits (1154), Expect = e-124
 Identities = 220/308 (71%), Positives = 258/308 (83%)
 Frame = -2

Query: 1259 KLSVGSCNFGAKGMNAVIYNCSMLEQLSVKRLRGIKKGAGSDLIGPGVAAGSLKTICLKE 1080
            KLS GSC FG+KGMNAV+ NC+ LE+LSVKRLRGI   A ++ IGPGVAA SLK +CLKE
Sbjct: 185  KLSCGSCTFGSKGMNAVLDNCAALEELSVKRLRGITDAAAAEPIGPGVAAASLKIVCLKE 244

Query: 1079 LSNGQCFSPLIVGAKNLKTFKLFRCSGDWDRLLEMFAENVSCLVEVHLERLQVSDRGLGA 900
            L NGQCF  LI+GAKNLKT KLFRCSGDWDRL ++ A+ V+ +VEVHLERLQ+SD GL A
Sbjct: 245  LYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRVTNMVEVHLERLQISDVGLQA 304

Query: 899  VSNCLGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGSKMNRIGDEGLIAIARRCPN 720
            ++N   LEILHLVKTPEC+++GLVAIADRCK LRKLHIDG K NRIGDEGLIA+A+ CPN
Sbjct: 305  IANFSSLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDEGLIAVAKGCPN 364

Query: 719  LKEVVLIDVNPTLLSLGLLAANCQNLERLALCGSETFGDAEISCIAANCGALRKLCIKGC 540
            L E+VLI VNPT  SL +LA+NC+NLERLALCGS++ GD EISCIAA C AL+KLCIK C
Sbjct: 365  LLELVLIGVNPTKASLEMLASNCRNLERLALCGSDSVGDTEISCIAAKCVALKKLCIKSC 424

Query: 539  PVSDHGMEALAGGCPSLVKVKVRKCRGVTCEGVNWLRESRGSLAVNLDTGANEIPEDVAG 360
            PVSD GMEALA GCP+LVKVKV+KC+GVT EG +WLR +RGS+AVNLDTG  E+ E  A 
Sbjct: 425  PVSDQGMEALANGCPNLVKVKVKKCKGVTPEGGDWLRRTRGSVAVNLDTGEAELQEASAS 484

Query: 359  EGGLEENV 336
            +GG ++NV
Sbjct: 485  DGGAQDNV 492


>ref|XP_003550322.1| PREDICTED: F-box protein At1g47056-like [Glycine max]
          Length = 563

 Score =  447 bits (1149), Expect = e-123
 Identities = 219/307 (71%), Positives = 256/307 (83%)
 Frame = -2

Query: 1259 KLSVGSCNFGAKGMNAVIYNCSMLEQLSVKRLRGIKKGAGSDLIGPGVAAGSLKTICLKE 1080
            KLS GSC FG+KGMNAV+ NC+ LE+LSVKRLRGI   A ++ IGPGVAA SLKT+CLKE
Sbjct: 184  KLSCGSCTFGSKGMNAVLDNCAALEELSVKRLRGIADTAAAEPIGPGVAAASLKTVCLKE 243

Query: 1079 LSNGQCFSPLIVGAKNLKTFKLFRCSGDWDRLLEMFAENVSCLVEVHLERLQVSDRGLGA 900
            L NGQCF  LI+GAKNLKT KLFRCSGDWDRL ++  + V+ +VEVHLERLQ+SD GL A
Sbjct: 244  LYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLLVDRVTKIVEVHLERLQISDVGLQA 303

Query: 899  VSNCLGLEILHLVKTPECTNVGLVAIADRCKHLRKLHIDGSKMNRIGDEGLIAIARRCPN 720
            ++N   LEILHLVKTPEC+++GLVAIADRCK LRKLHIDG K NRIGDEGLIA+A+ CPN
Sbjct: 304  IANYSSLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDEGLIAVAKGCPN 363

Query: 719  LKEVVLIDVNPTLLSLGLLAANCQNLERLALCGSETFGDAEISCIAANCGALRKLCIKGC 540
            L E+VLI VNPT  SL +LA+NCQNLERLALCGS++ GD EISCIAA C AL+KLCIK C
Sbjct: 364  LLELVLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSC 423

Query: 539  PVSDHGMEALAGGCPSLVKVKVRKCRGVTCEGVNWLRESRGSLAVNLDTGANEIPEDVAG 360
            PVSD GMEAL  GCP+LVKVKV+KC+GVT EG +WLR +RGS+AVNLDTG  E+ E  A 
Sbjct: 424  PVSDQGMEALGNGCPNLVKVKVKKCKGVTPEGGDWLRRTRGSVAVNLDTGEAELQEASAS 483

Query: 359  EGGLEEN 339
            +GG ++N
Sbjct: 484  DGGAQDN 490