BLASTX nr result

ID: Coptis21_contig00001044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001044
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM65850.1| putative peroxisomal membrane carrier protein [Ar...   485   e-134
ref|NP_181526.1| solute carrier family 25 member 17 [Arabidopsis...   483   e-134
ref|XP_002881687.1| peroxisomal membrane protein [Arabidopsis ly...   483   e-134
ref|XP_002526854.1| peroxisomal membrane protein pmp34, putative...   480   e-133
emb|CBI31533.3| unnamed protein product [Vitis vinifera]              479   e-133

>gb|AAM65850.1| putative peroxisomal membrane carrier protein [Arabidopsis thaliana]
          Length = 331

 Score =  485 bits (1248), Expect = e-134
 Identities = 252/332 (75%), Positives = 277/332 (83%)
 Frame = -3

Query: 1186 MSDALINGLSGAGGGIIAQLITYPLQTVNTRQQTDRDPKKAKRKLGTIEQMCQVVKNEGW 1007
            MSDALINGL+GAGGGIIAQL+TYPLQTVNTRQQT+RD K+ KRKLGTIE MCQVVK EGW
Sbjct: 1    MSDALINGLAGAGGGIIAQLLTYPLQTVNTRQQTERDLKREKRKLGTIEHMCQVVKQEGW 60

Query: 1006 ERLYGGLTPSLVGTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAI 827
            ERLYGGL PSL GTAASQGVYYYFYQ+FR++AEATA  R KKG GDG+VGMF+SL+VAA 
Sbjct: 61   ERLYGGLAPSLAGTAASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFASLLVAAF 120

Query: 826  SGCVNVLLTNPIWVVVTRMQTHKKGLIEDKPTCNISSDDSVQIAAIEPPPYGTTNAVQEV 647
            +G VNVL+TNPIWV+VTRMQTH+K   +        S ++  + A+EP PYGT N ++EV
Sbjct: 121  AGSVNVLMTNPIWVIVTRMQTHRKMTKDQTAAPESPSSNAEALVAVEPRPYGTFNTIREV 180

Query: 646  YGEAGIRGFWKGVFPTLIMVSNPSIQFMLYETXXXXXXXXXXXKGNTGVTALEVFLLGAV 467
            Y EAGI GFWKGV PTLIMVSNPS+QFMLYET           KG+  VTALE FLLGAV
Sbjct: 181  YDEAGITGFWKGVIPTLIMVSNPSMQFMLYETMLTKLKKKRALKGSNNVTALETFLLGAV 240

Query: 466  AKLGATVVTYPLLVVKSRLQAKQVTGEDKQLQYKGTLDAILKMIRYEGLYGFYKGMSTKI 287
            AKLGATV TYPLLVVKSRLQAKQVT  DK+ QYKGTLDAILKMIRYEGLYGFYKGMSTKI
Sbjct: 241  AKLGATVTTYPLLVVKSRLQAKQVTTGDKRQQYKGTLDAILKMIRYEGLYGFYKGMSTKI 300

Query: 286  VQSVLAAAVLFMIKEELVKWARLLLTSNVVSI 191
            VQSVLAAAVLFMIKEELVK A+LLL SN  SI
Sbjct: 301  VQSVLAAAVLFMIKEELVKGAKLLL-SNATSI 331


>ref|NP_181526.1| solute carrier family 25 member 17 [Arabidopsis thaliana]
            gi|75218946|sp|O04200.1|PXN_ARATH RecName:
            Full=Peroxisomal nicotinamide adenine dinucleotide
            carrier; AltName: Full=Peroxisomal NAD carrier; AltName:
            Full=Peroxisomal membrane protein 38, (PMP36);
            Short=AtPMP38; AltName: Full=Protein ABERRANT PEROXISOME
            MORPHOLOGY 3; AltName: Full=Solute carrier family 25
            member 17 gi|2088650|gb|AAB95282.1| putative peroxisomal
            membrane carrier protein [Arabidopsis thaliana]
            gi|14532468|gb|AAK63962.1| At2g39970/T28M21.13
            [Arabidopsis thaliana] gi|15146342|dbj|BAB62814.1|
            36kDa-peroxisomal membrane protein (PMP36) [Arabidopsis
            thaliana] gi|27764928|gb|AAO23585.1| At2g39970/T28M21.13
            [Arabidopsis thaliana] gi|330254663|gb|AEC09757.1| solute
            carrier family 25 member 17 [Arabidopsis thaliana]
          Length = 331

 Score =  483 bits (1244), Expect = e-134
 Identities = 248/327 (75%), Positives = 275/327 (84%)
 Frame = -3

Query: 1186 MSDALINGLSGAGGGIIAQLITYPLQTVNTRQQTDRDPKKAKRKLGTIEQMCQVVKNEGW 1007
            MSDALINGL+GAGGGIIAQL+TYPLQTVNTRQQT+RD K+ KRKLGTIE MCQVVK EGW
Sbjct: 1    MSDALINGLAGAGGGIIAQLLTYPLQTVNTRQQTERDLKREKRKLGTIEHMCQVVKQEGW 60

Query: 1006 ERLYGGLTPSLVGTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAI 827
            ERLYGGL PSL GTAASQGVYYYFYQ+FR++AEATA  R KKG GDG+VGMF+SL+VAA 
Sbjct: 61   ERLYGGLAPSLAGTAASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFASLLVAAF 120

Query: 826  SGCVNVLLTNPIWVVVTRMQTHKKGLIEDKPTCNISSDDSVQIAAIEPPPYGTTNAVQEV 647
            +G VNVL+TNPIWV+VTRMQTH+K   +        S ++  + A+EP PYGT N ++EV
Sbjct: 121  AGSVNVLMTNPIWVIVTRMQTHRKMTKDQTAAPESPSSNAEALVAVEPRPYGTFNTIREV 180

Query: 646  YGEAGIRGFWKGVFPTLIMVSNPSIQFMLYETXXXXXXXXXXXKGNTGVTALEVFLLGAV 467
            Y EAGI GFWKGV PTLIMVSNPS+QFMLYET           KG+  VTALE FLLGAV
Sbjct: 181  YDEAGITGFWKGVIPTLIMVSNPSMQFMLYETMLTKLKKKRALKGSNNVTALETFLLGAV 240

Query: 466  AKLGATVVTYPLLVVKSRLQAKQVTGEDKQLQYKGTLDAILKMIRYEGLYGFYKGMSTKI 287
            AKLGATV TYPLLVVKSRLQAKQVT  DK+ QYKGTLDAILKMIRYEGLYGFYKGMSTKI
Sbjct: 241  AKLGATVTTYPLLVVKSRLQAKQVTTGDKRQQYKGTLDAILKMIRYEGLYGFYKGMSTKI 300

Query: 286  VQSVLAAAVLFMIKEELVKWARLLLTS 206
            VQSVLAAAVLFMIKEELVK A+LLL++
Sbjct: 301  VQSVLAAAVLFMIKEELVKGAKLLLSN 327


>ref|XP_002881687.1| peroxisomal membrane protein [Arabidopsis lyrata subsp. lyrata]
            gi|297327526|gb|EFH57946.1| peroxisomal membrane protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 331

 Score =  483 bits (1244), Expect = e-134
 Identities = 248/328 (75%), Positives = 280/328 (85%), Gaps = 1/328 (0%)
 Frame = -3

Query: 1186 MSDALINGLSGAGGGIIAQLITYPLQTVNTRQQTDRDPKKAKRKLGTIEQMCQVVKNEGW 1007
            MSDALINGL+GAGGGIIAQL+TYPLQTVNTRQQT+RD K+ KRKLGTIE MCQVVK EGW
Sbjct: 1    MSDALINGLAGAGGGIIAQLLTYPLQTVNTRQQTERDLKREKRKLGTIEHMCQVVKQEGW 60

Query: 1006 ERLYGGLTPSLVGTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAI 827
            ERLYGGL PSL GTAASQGVYYYFYQ+FR++AEATA  R KKG GDG+VGMF+SL+VAA 
Sbjct: 61   ERLYGGLAPSLAGTAASQGVYYYFYQVFRNQAEATALARKKKGLGDGSVGMFASLLVAAF 120

Query: 826  SGCVNVLLTNPIWVVVTRMQTHKKGLIEDKPTCNIS-SDDSVQIAAIEPPPYGTTNAVQE 650
            +G VNVL+TNPIWV+VTRMQTH+K + +D+   ++S S D+  +  +EP PYGT N +QE
Sbjct: 121  AGSVNVLMTNPIWVIVTRMQTHRK-MTKDQTAASVSPSSDAEALVTVEPRPYGTFNTIQE 179

Query: 649  VYGEAGIRGFWKGVFPTLIMVSNPSIQFMLYETXXXXXXXXXXXKGNTGVTALEVFLLGA 470
            VY EAG+ GFWKGV PTLIMVSNP++QFMLYET           KG+  VTALE FLLGA
Sbjct: 180  VYDEAGVTGFWKGVIPTLIMVSNPAMQFMLYETMLTKLKKKRALKGSNSVTALETFLLGA 239

Query: 469  VAKLGATVVTYPLLVVKSRLQAKQVTGEDKQLQYKGTLDAILKMIRYEGLYGFYKGMSTK 290
            VAKLGATV TYPLLVVKSRLQAKQVT  DK+ QYKGTLDAILKMI+YEGLYGFYKGMSTK
Sbjct: 240  VAKLGATVTTYPLLVVKSRLQAKQVTTGDKRHQYKGTLDAILKMIQYEGLYGFYKGMSTK 299

Query: 289  IVQSVLAAAVLFMIKEELVKWARLLLTS 206
            IVQSVLAAAVLFMIKEELVK A+LLL++
Sbjct: 300  IVQSVLAAAVLFMIKEELVKGAKLLLSN 327


>ref|XP_002526854.1| peroxisomal membrane protein pmp34, putative [Ricinus communis]
            gi|223533753|gb|EEF35485.1| peroxisomal membrane protein
            pmp34, putative [Ricinus communis]
          Length = 338

 Score =  480 bits (1236), Expect = e-133
 Identities = 250/333 (75%), Positives = 281/333 (84%), Gaps = 2/333 (0%)
 Frame = -3

Query: 1186 MSDALINGLSGAGGGIIAQLITYPLQTVNTRQQTDRDPKKAKRKLGTIEQMCQVVKNEGW 1007
            MSDALINGL+GAGGGIIAQLITYPLQTVNTRQQTDRDPKK +RKLGTIEQMCQVVKNEGW
Sbjct: 1    MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTDRDPKKEQRKLGTIEQMCQVVKNEGW 60

Query: 1006 ERLYGGLTPSLVGTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAI 827
            ERLYGGLTPSLVGTAASQGVYYYFYQIFRDKAEA A    +KG GDG+VGMFSSLVVAA+
Sbjct: 61   ERLYGGLTPSLVGTAASQGVYYYFYQIFRDKAEAIALEHKRKGIGDGSVGMFSSLVVAAL 120

Query: 826  SGCVNVLLTNPIWVVVTRMQTHKKGLIEDKPTCNISSDDSVQIAAIEPPPYGTTNAVQEV 647
            +GCVNVLLTNPIWVVVTRMQTH K   + K T +++ +D+    A+EPPP+ T++A+QEV
Sbjct: 121  AGCVNVLLTNPIWVVVTRMQTHTKASKKFK-TLSVAENDTF-FDAVEPPPFRTSHAIQEV 178

Query: 646  YGEAGIRGFWKGVFPTLIMVSNPSIQFMLYET--XXXXXXXXXXXKGNTGVTALEVFLLG 473
            Y E G+ GFW+GV PTLIMVSNPSIQFMLYET             +G+  VTA+E+FLLG
Sbjct: 179  YDEGGVFGFWRGVLPTLIMVSNPSIQFMLYETMLKKLKKQRALRKRGDVAVTAVEIFLLG 238

Query: 472  AVAKLGATVVTYPLLVVKSRLQAKQVTGEDKQLQYKGTLDAILKMIRYEGLYGFYKGMST 293
            A+AKLGATVVTYPLLVVKSRLQAKQ+   DK+  Y+GTLDAILKMI YEG YGFYKGM+T
Sbjct: 239  ALAKLGATVVTYPLLVVKSRLQAKQLKTGDKRHHYEGTLDAILKMIHYEGFYGFYKGMNT 298

Query: 292  KIVQSVLAAAVLFMIKEELVKWARLLLTSNVVS 194
            KIVQSVLAAAVLFM+KEELV+  R LLT   V+
Sbjct: 299  KIVQSVLAAAVLFMVKEELVRGTRFLLTKASVN 331


>emb|CBI31533.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  479 bits (1233), Expect = e-133
 Identities = 249/334 (74%), Positives = 282/334 (84%), Gaps = 3/334 (0%)
 Frame = -3

Query: 1186 MSDALINGLSGAGGGIIAQLITYPLQTVNTRQQTDRDPKKAKRKLGTIEQMCQVVKNEGW 1007
            MSDALINGL+GAGGGIIAQL+TYPLQTVNTRQQT+RDPK+ KRKLGTI QM QVVK+EGW
Sbjct: 1    MSDALINGLAGAGGGIIAQLLTYPLQTVNTRQQTERDPKREKRKLGTIGQMYQVVKHEGW 60

Query: 1006 ERLYGGLTPSLVGTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAI 827
            +RLYGGLTPSLVGTAASQGVYYYFYQIFR+KAEA+A  R+K G GDG+VGMFSSLVVAA+
Sbjct: 61   DRLYGGLTPSLVGTAASQGVYYYFYQIFRNKAEASALERMKNGIGDGSVGMFSSLVVAAL 120

Query: 826  SGCVNVLLTNPIWVVVTRMQTHKKGLIEDKPTCNIS-SDDSVQIAAIEPPPYGTTNAVQE 650
            SGCVNVLLTNPIWV+VTRMQTH K   + KP  + + + +   ++AIEP PYGT++A+QE
Sbjct: 121  SGCVNVLLTNPIWVIVTRMQTHTKISKQSKPIYSPAVAANEAAVSAIEPTPYGTSHAIQE 180

Query: 649  VYGEAGIRGFWKGVFPTLIMVSNPSIQFMLYET--XXXXXXXXXXXKGNTGVTALEVFLL 476
            VYGEAG+RGFWKGV PTLIMVSNPSIQFMLYET             K + G+TA E+FLL
Sbjct: 181  VYGEAGVRGFWKGVLPTLIMVSNPSIQFMLYETMLKKLRKRRASQKKDSGGITASEIFLL 240

Query: 475  GAVAKLGATVVTYPLLVVKSRLQAKQVTGEDKQLQYKGTLDAILKMIRYEGLYGFYKGMS 296
            GA+AKLGATVVTYPLLVVKSRLQAKQV G DK+  YKGT DAI KMI YEG  GFYKGM+
Sbjct: 241  GALAKLGATVVTYPLLVVKSRLQAKQVAGGDKRHHYKGTCDAIGKMIHYEGFAGFYKGMN 300

Query: 295  TKIVQSVLAAAVLFMIKEELVKWARLLLTSNVVS 194
            TKIVQSVLAAAVLFM+KEELV+  RLLL+  V +
Sbjct: 301  TKIVQSVLAAAVLFMVKEELVRGVRLLLSKKVTN 334


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