BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001026
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...   202   6e-66
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   198   8e-64
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]   198   8e-64
emb|CBI39775.3| unnamed protein product [Vitis vinifera]              198   8e-64
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-58

>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  202 bits (515), Expect(3) = 6e-66
 Identities = 96/133 (72%), Positives = 111/133 (83%)
 Frame = +3

Query: 3   VLAACADLGTLDLGRRVHQYLNQCGFGRNVRVCNTLIDVYIKCGCLEIARDVFYEMKGRT 182
           VLAACADLG LDLGR VH+Y  + GF RNV VCNTLID+Y+KCGCLE AR VFYEM+ RT
Sbjct: 148 VLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERT 207

Query: 183 VVSWSAMIGGYAMHGQAEEALKFFFKMSRIGIRPNGVTFIGLLHACSHMRLVDEGHGFFS 362
           VVSWSAMI G AMHGQAEEAL  F +M ++G++PNGVTFIGLLHACSHM L+DEG  FF+
Sbjct: 208 VVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFA 267

Query: 363 SMTTDYEIIP*VD 401
           SMT DY +IP ++
Sbjct: 268 SMTADYGVIPQIE 280



 Score = 50.4 bits (119), Expect(3) = 6e-66
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +2

Query: 392 LGGYKVHKNVELAEEAIKHLLVLDPLND 475
           LGG KVHKN++LAEEAIKHL  LDPLND
Sbjct: 318 LGGCKVHKNIDLAEEAIKHLSELDPLND 345



 Score = 44.7 bits (104), Expect(3) = 6e-66
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 478 YYVVLSNVYADAGR*EDAARVRMLMSMRGMQ 570
           YYVV+SN+YA+A R EDAARVR LM  RG++
Sbjct: 347 YYVVISNIYAEAERWEDAARVRKLMKDRGVK 377



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 31/146 (21%)
 Frame = +3

Query: 3   VLAACADLGTLDLGRRVHQYLNQCGFGRNVRVCNTLIDVYIKC----------------- 131
           VL AC  L  +  G+ +H    + GFG N+ + N ++++Y  C                 
Sbjct: 16  VLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRD 75

Query: 132 --------------GCLEIARDVFYEMKGRTVVSWSAMIGGYAMHGQAEEALKFFFKMSR 269
                         G ++ A   F  M  + V SW++MI G+   G+  EA+  F K+  
Sbjct: 76  AVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLED 135

Query: 270 IGIRPNGVTFIGLLHACSHMRLVDEG 347
             +RPN VT + +L AC+ +  +D G
Sbjct: 136 EAVRPNEVTVVSVLAACADLGDLDLG 161


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  198 bits (503), Expect(3) = 8e-64
 Identities = 95/133 (71%), Positives = 110/133 (82%)
 Frame = +3

Query: 3   VLAACADLGTLDLGRRVHQYLNQCGFGRNVRVCNTLIDVYIKCGCLEIARDVFYEMKGRT 182
           VLAACADLG LDLG R+H+Y N+ GF RNVR+ NTLID+Y+KCGCLE A  VF EM+ RT
Sbjct: 266 VLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERT 325

Query: 183 VVSWSAMIGGYAMHGQAEEALKFFFKMSRIGIRPNGVTFIGLLHACSHMRLVDEGHGFFS 362
           VVSWSAMIGG AMHG+AEEAL+ F  MS++GI PNGVTFIGLLHACSHM L+ EG  FF+
Sbjct: 326 VVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFA 385

Query: 363 SMTTDYEIIP*VD 401
           SMT DY IIP ++
Sbjct: 386 SMTRDYGIIPQIE 398



 Score = 50.1 bits (118), Expect(3) = 8e-64
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +2

Query: 392 LGGYKVHKNVELAEEAIKHLLVLDPLND 475
           LG  +VHKNVE+AEEAIKHLL LDPLND
Sbjct: 436 LGACRVHKNVEMAEEAIKHLLELDPLND 463



 Score = 42.4 bits (98), Expect(3) = 8e-64
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +1

Query: 478 YYVVLSNVYADAGR*EDAARVRMLMSMR 561
           YYVVLSN+YA+AGR ED ARVR  M  R
Sbjct: 465 YYVVLSNIYAEAGRWEDTARVRKFMKDR 492



 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 31/146 (21%)
 Frame = +3

Query: 3   VLAACADLGTLDLGRRVHQYLNQCGFGRNVRVCNTLIDVYIKCGCLEIAR---------- 152
           VL AC +L  L  GR +H  + + GF  N+ + N ++ +Y  CG +  AR          
Sbjct: 134 VLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRD 193

Query: 153 ---------------------DVFYEMKGRTVVSWSAMIGGYAMHGQAEEALKFFFKMSR 269
                                D+F  M  R V SW++MI GY   G+A+EA+  F KM  
Sbjct: 194 VVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEE 253

Query: 270 IGIRPNGVTFIGLLHACSHMRLVDEG 347
            G++ N VT + +L AC+ +  +D G
Sbjct: 254 AGVKCNEVTVVAVLAACADLGALDLG 279


>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  198 bits (503), Expect(3) = 8e-64
 Identities = 95/133 (71%), Positives = 110/133 (82%)
 Frame = +3

Query: 3   VLAACADLGTLDLGRRVHQYLNQCGFGRNVRVCNTLIDVYIKCGCLEIARDVFYEMKGRT 182
           VLAACADLG LDLG R+H+Y N+ GF RNVR+ NTLID+Y+KCGCLE A  VF EM+ RT
Sbjct: 266 VLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERT 325

Query: 183 VVSWSAMIGGYAMHGQAEEALKFFFKMSRIGIRPNGVTFIGLLHACSHMRLVDEGHGFFS 362
           VVSWSAMIGG AMHG+AEEAL+ F  MS++GI PNGVTFIGLLHACSHM L+ EG  FF+
Sbjct: 326 VVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFA 385

Query: 363 SMTTDYEIIP*VD 401
           SMT DY IIP ++
Sbjct: 386 SMTRDYGIIPQIE 398



 Score = 50.1 bits (118), Expect(3) = 8e-64
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +2

Query: 392 LGGYKVHKNVELAEEAIKHLLVLDPLND 475
           LG  +VHKNVE+AEEAIKHLL LDPLND
Sbjct: 436 LGACRVHKNVEMAEEAIKHLLELDPLND 463



 Score = 42.4 bits (98), Expect(3) = 8e-64
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +1

Query: 478 YYVVLSNVYADAGR*EDAARVRMLMSMR 561
           YYVVLSN+YA+AGR ED ARVR  M  R
Sbjct: 465 YYVVLSNIYAEAGRWEDTARVRKFMKDR 492



 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 31/146 (21%)
 Frame = +3

Query: 3   VLAACADLGTLDLGRRVHQYLNQCGFGRNVRVCNTLIDVYIKCGCLEIAR---------- 152
           VL AC +L  L  GR +H  + + GF  N+ + N ++ +Y  CG +  AR          
Sbjct: 134 VLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRD 193

Query: 153 ---------------------DVFYEMKGRTVVSWSAMIGGYAMHGQAEEALKFFFKMSR 269
                                D+F  M  R V SW++MI GY   G+A+EA+  F KM  
Sbjct: 194 VVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEE 253

Query: 270 IGIRPNGVTFIGLLHACSHMRLVDEG 347
            G++ N VT + +L AC+ +  +D G
Sbjct: 254 AGVKCNEVTVVAVLAACADLGALDLG 279


>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  198 bits (503), Expect(3) = 8e-64
 Identities = 95/133 (71%), Positives = 110/133 (82%)
 Frame = +3

Query: 3   VLAACADLGTLDLGRRVHQYLNQCGFGRNVRVCNTLIDVYIKCGCLEIARDVFYEMKGRT 182
           VLAACADLG LDLG R+H+Y N+ GF RNVR+ NTLID+Y+KCGCLE A  VF EM+ RT
Sbjct: 233 VLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERT 292

Query: 183 VVSWSAMIGGYAMHGQAEEALKFFFKMSRIGIRPNGVTFIGLLHACSHMRLVDEGHGFFS 362
           VVSWSAMIGG AMHG+AEEAL+ F  MS++GI PNGVTFIGLLHACSHM L+ EG  FF+
Sbjct: 293 VVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFA 352

Query: 363 SMTTDYEIIP*VD 401
           SMT DY IIP ++
Sbjct: 353 SMTRDYGIIPQIE 365



 Score = 50.1 bits (118), Expect(3) = 8e-64
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +2

Query: 392 LGGYKVHKNVELAEEAIKHLLVLDPLND 475
           LG  +VHKNVE+AEEAIKHLL LDPLND
Sbjct: 403 LGACRVHKNVEMAEEAIKHLLELDPLND 430



 Score = 42.4 bits (98), Expect(3) = 8e-64
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +1

Query: 478 YYVVLSNVYADAGR*EDAARVRMLMSMR 561
           YYVVLSN+YA+AGR ED ARVR  M  R
Sbjct: 432 YYVVLSNIYAEAGRWEDTARVRKFMKDR 459


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  177 bits (448), Expect(3) = 8e-58
 Identities = 80/133 (60%), Positives = 104/133 (78%)
 Frame = +3

Query: 3   VLAACADLGTLDLGRRVHQYLNQCGFGRNVRVCNTLIDVYIKCGCLEIARDVFYEMKGRT 182
           VL ACAD+G L LGRR+H + N+ G+ +N+RVCNTLID+Y+KCGCLE A  +F  M+ RT
Sbjct: 251 VLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERT 310

Query: 183 VVSWSAMIGGYAMHGQAEEALKFFFKMSRIGIRPNGVTFIGLLHACSHMRLVDEGHGFFS 362
           VVSWSAMI G A HG+AE+AL  F KM   G++PN VTFIG+LHACSHM +V++G  +F+
Sbjct: 311 VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFA 370

Query: 363 SMTTDYEIIP*VD 401
           SMT DY I+P ++
Sbjct: 371 SMTRDYGIVPRIE 383



 Score = 47.0 bits (110), Expect(3) = 8e-58
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = +2

Query: 392 LGGYKVHKNVELAEEAIKHLLVLDPLND 475
           LGG KVHKN++LAEEA +HL  LDPLND
Sbjct: 421 LGGCKVHKNIKLAEEATRHLSKLDPLND 448



 Score = 46.6 bits (109), Expect(3) = 8e-58
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +1

Query: 478 YYVVLSNVYADAGR*EDAARVRMLMSMRGMQ 570
           YYVVLSN+YA+AGR ED ARVR LM  RG++
Sbjct: 450 YYVVLSNIYAEAGRWEDVARVRKLMRDRGVK 480



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
 Frame = +3

Query: 3   VLAACADLGTLDLGRRVHQYLNQCGFGRNVRVCNTLIDVYIKCGCLEIARDVFYEMKGRT 182
           VL AC+ L  +  G+ VH Y+ + G   N+ + N ++ +Y  CG + +AR VF +M  R 
Sbjct: 119 VLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRD 178

Query: 183 VV-------------------------------SWSAMIGGYAMHGQAEEALKFFFKMSR 269
           V+                               SW++MIGGYA  G+++EA+  F +M  
Sbjct: 179 VITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMED 238

Query: 270 IGIRPNGVTFIGLLHACSHM 329
            G+ PN VT + +L AC+ M
Sbjct: 239 AGLLPNEVTVVAVLVACADM 258