BLASTX nr result
ID: Coptis21_contig00001025
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00001025
(967 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2... 480 e-133
emb|CBI39775.3| unnamed protein product [Vitis vinifera] 476 e-132
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi... 476 e-132
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera] 476 e-132
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi... 468 e-130
>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
predicted protein [Populus trichocarpa]
Length = 514
Score = 480 bits (1235), Expect = e-133
Identities = 229/301 (76%), Positives = 260/301 (86%)
Frame = +1
Query: 64 RRIHEYLNQCGFGRNVRVCNTLIDMYIKCGCLEIARDVFYEMKERTVVSWSAMIGGCAMH 243
R +HEY + GF RNV VCNTLIDMY+KCGCLE AR VFYEM+ERTVVSWSAMI G AMH
Sbjct: 162 RIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMH 221
Query: 244 GQAEEALKLFSKMSRIGIRPNGVTFIGLLHACSHMGLVDEGHGFFSSMTRDYEIIPQIEH 423
GQAEEAL LFS+M ++G++PNGVTFIGLLHACSHMGL+DEG FF+SMT DY +IPQIEH
Sbjct: 222 GQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEH 281
Query: 424 YGCMVDLLSRSGLLQEAHEFIKNMPIKANAVVWGALLGGCKVHKNVELAEEAIKHLLVLD 603
YGC+VDL SR+GLL+EAHEFI +MPIK N VVWGALLGGCKVHKN++LAEEAIKHL LD
Sbjct: 282 YGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELD 341
Query: 604 PLNDGYYVVLSNVYADAGRWEDAARVRMLMRDQGVKKTPGWSSITVDNVVHEFVAGDATH 783
PLNDGYYVV+SN+YA+A RWEDAARVR LM+D+GVKKT GWSSITV+ VVHEFVAGD TH
Sbjct: 342 PLNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTH 401
Query: 784 PQAEEIYHKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLINTPP 963
PQAE+I W +LL +MK+RGY P T VVLLDM+E +KE LYRHSEKLAV FGL+ TP
Sbjct: 402 PQAEDICKIWDKLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPE 461
Query: 964 G 966
G
Sbjct: 462 G 462
Score = 70.1 bits (170), Expect = 8e-10
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Frame = +1
Query: 64 RRIHEYLNQCGFGRNVRVCNTLIDMYIKCGCLEIARDVFYEMKERTVV------------ 207
+ IH + GFG N+ + N ++++Y CG + A +F +M +R V
Sbjct: 30 KTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRDAVTWNIVIAQLAKR 89
Query: 208 -------------------SWSAMIGGCAMHGQAEEALKLFSKMSRIGIRPNGVTFIGLL 330
SW++MI G G+ EA+ LF K+ +RPN VT + +L
Sbjct: 90 GDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVL 149
Query: 331 HACSHMGLVDEGHGFFSSMTRDYEIIPQIEHYGCMVDLLSRSGLLQEAHEFIKNMPIKAN 510
AC+ +G +D G T+ + ++D+ + G L+ A M +
Sbjct: 150 AACADLGDLDLGRIVHEYSTKS-GFKRNVHVCNTLIDMYVKCGCLENARRVFYEME-ERT 207
Query: 511 AVVWGALLGGCKVHKNVELA 570
V W A++ G +H E A
Sbjct: 208 VVSWSAMIAGLAMHGQAEEA 227
>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 476 bits (1226), Expect = e-132
Identities = 226/298 (75%), Positives = 260/298 (87%)
Frame = +1
Query: 67 RIHEYLNQCGFGRNVRVCNTLIDMYIKCGCLEIARDVFYEMKERTVVSWSAMIGGCAMHG 246
RIHEY N+ GF RNVR+ NTLIDMY+KCGCLE A VF EM+ERTVVSWSAMIGG AMHG
Sbjct: 248 RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHG 307
Query: 247 QAEEALKLFSKMSRIGIRPNGVTFIGLLHACSHMGLVDEGHGFFSSMTRDYEIIPQIEHY 426
+AEEAL+LFS MS++GI PNGVTFIGLLHACSHMGL+ EG FF+SMTRDY IIPQIEHY
Sbjct: 308 RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHY 367
Query: 427 GCMVDLLSRSGLLQEAHEFIKNMPIKANAVVWGALLGGCKVHKNVELAEEAIKHLLVLDP 606
GCMVDLLSR+GLL EAHEFI NMP+K N VVWGALLG C+VHKNVE+AEEAIKHLL LDP
Sbjct: 368 GCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP 427
Query: 607 LNDGYYVVLSNVYADAGRWEDAARVRMLMRDQGVKKTPGWSSITVDNVVHEFVAGDATHP 786
LNDGYYVVLSN+YA+AGRWED ARVR M+D+ VKKTPGWSSITVD VVHEFVAG+ +HP
Sbjct: 428 LNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHP 487
Query: 787 QAEEIYHKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLINTP 960
E+I+ +W+ELLE+M+ +GYVP+T VVLLD++E +K + RHSEKLA+ FGL+NTP
Sbjct: 488 DTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTP 545
Score = 69.7 bits (169), Expect = 1e-09
Identities = 40/126 (31%), Positives = 68/126 (53%)
Frame = +1
Query: 208 SWSAMIGGCAMHGQAEEALKLFSKMSRIGIRPNGVTFIGLLHACSHMGLVDEGHGFFSSM 387
SW++MI G G+A+EA+ LF+KM G++ N VT + +L AC+ +G +D G
Sbjct: 194 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 253
Query: 388 TRDYEIIPQIEHYGCMVDLLSRSGLLQEAHEFIKNMPIKANAVVWGALLGGCKVHKNVEL 567
R + + ++D+ + G L+EA + + M + V W A++GG +H
Sbjct: 254 NR-HGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMHGR--- 308
Query: 568 AEEAIK 585
AEEA++
Sbjct: 309 AEEALR 314
>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 476 bits (1226), Expect = e-132
Identities = 226/298 (75%), Positives = 260/298 (87%)
Frame = +1
Query: 67 RIHEYLNQCGFGRNVRVCNTLIDMYIKCGCLEIARDVFYEMKERTVVSWSAMIGGCAMHG 246
RIHEY N+ GF RNVR+ NTLIDMY+KCGCLE A VF EM+ERTVVSWSAMIGG AMHG
Sbjct: 281 RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHG 340
Query: 247 QAEEALKLFSKMSRIGIRPNGVTFIGLLHACSHMGLVDEGHGFFSSMTRDYEIIPQIEHY 426
+AEEAL+LFS MS++GI PNGVTFIGLLHACSHMGL+ EG FF+SMTRDY IIPQIEHY
Sbjct: 341 RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHY 400
Query: 427 GCMVDLLSRSGLLQEAHEFIKNMPIKANAVVWGALLGGCKVHKNVELAEEAIKHLLVLDP 606
GCMVDLLSR+GLL EAHEFI NMP+K N VVWGALLG C+VHKNVE+AEEAIKHLL LDP
Sbjct: 401 GCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP 460
Query: 607 LNDGYYVVLSNVYADAGRWEDAARVRMLMRDQGVKKTPGWSSITVDNVVHEFVAGDATHP 786
LNDGYYVVLSN+YA+AGRWED ARVR M+D+ VKKTPGWSSITVD VVHEFVAG+ +HP
Sbjct: 461 LNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHP 520
Query: 787 QAEEIYHKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLINTP 960
E+I+ +W+ELLE+M+ +GYVP+T VVLLD++E +K + RHSEKLA+ FGL+NTP
Sbjct: 521 DTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTP 578
Score = 88.2 bits (217), Expect = 3e-15
Identities = 55/161 (34%), Positives = 86/161 (53%)
Frame = +1
Query: 103 RNVRVCNTLIDMYIKCGCLEIARDVFYEMKERTVVSWSAMIGGCAMHGQAEEALKLFSKM 282
R+V N +I IK G E A D+F M ER V SW++MI G G+A+EA+ LF+KM
Sbjct: 192 RDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKM 251
Query: 283 SRIGIRPNGVTFIGLLHACSHMGLVDEGHGFFSSMTRDYEIIPQIEHYGCMVDLLSRSGL 462
G++ N VT + +L AC+ +G +D G R + + ++D+ + G
Sbjct: 252 EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNR-HGFKRNVRISNTLIDMYVKCGC 310
Query: 463 LQEAHEFIKNMPIKANAVVWGALLGGCKVHKNVELAEEAIK 585
L+EA + + M + V W A++GG +H AEEA++
Sbjct: 311 LEEACKVFEEME-ERTVVSWSAMIGGLAMHGR---AEEALR 347
>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 476 bits (1226), Expect = e-132
Identities = 226/298 (75%), Positives = 260/298 (87%)
Frame = +1
Query: 67 RIHEYLNQCGFGRNVRVCNTLIDMYIKCGCLEIARDVFYEMKERTVVSWSAMIGGCAMHG 246
RIHEY N+ GF RNVR+ NTLIDMY+KCGCLE A VF EM+ERTVVSWSAMIGG AMHG
Sbjct: 281 RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHG 340
Query: 247 QAEEALKLFSKMSRIGIRPNGVTFIGLLHACSHMGLVDEGHGFFSSMTRDYEIIPQIEHY 426
+AEEAL+LFS MS++GI PNGVTFIGLLHACSHMGL+ EG FF+SMTRDY IIPQIEHY
Sbjct: 341 RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHY 400
Query: 427 GCMVDLLSRSGLLQEAHEFIKNMPIKANAVVWGALLGGCKVHKNVELAEEAIKHLLVLDP 606
GCMVDLLSR+GLL EAHEFI NMP+K N VVWGALLG C+VHKNVE+AEEAIKHLL LDP
Sbjct: 401 GCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP 460
Query: 607 LNDGYYVVLSNVYADAGRWEDAARVRMLMRDQGVKKTPGWSSITVDNVVHEFVAGDATHP 786
LNDGYYVVLSN+YA+AGRWED ARVR M+D+ VKKTPGWSSITVD VVHEFVAG+ +HP
Sbjct: 461 LNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHP 520
Query: 787 QAEEIYHKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLINTP 960
E+I+ +W+ELLE+M+ +GYVP+T VVLLD++E +K + RHSEKLA+ FGL+NTP
Sbjct: 521 DTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTP 578
Score = 88.2 bits (217), Expect = 3e-15
Identities = 55/161 (34%), Positives = 86/161 (53%)
Frame = +1
Query: 103 RNVRVCNTLIDMYIKCGCLEIARDVFYEMKERTVVSWSAMIGGCAMHGQAEEALKLFSKM 282
R+V N +I IK G E A D+F M ER V SW++MI G G+A+EA+ LF+KM
Sbjct: 192 RDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKM 251
Query: 283 SRIGIRPNGVTFIGLLHACSHMGLVDEGHGFFSSMTRDYEIIPQIEHYGCMVDLLSRSGL 462
G++ N VT + +L AC+ +G +D G R + + ++D+ + G
Sbjct: 252 EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNR-HGFKRNVRISNTLIDMYVKCGC 310
Query: 463 LQEAHEFIKNMPIKANAVVWGALLGGCKVHKNVELAEEAIK 585
L+EA + + M + V W A++GG +H AEEA++
Sbjct: 311 LEEACKVFEEME-ERTVVSWSAMIGGLAMHGR---AEEALR 347
>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
[Cucumis sativus]
Length = 617
Score = 468 bits (1205), Expect = e-130
Identities = 218/301 (72%), Positives = 258/301 (85%)
Frame = +1
Query: 64 RRIHEYLNQCGFGRNVRVCNTLIDMYIKCGCLEIARDVFYEMKERTVVSWSAMIGGCAMH 243
RRIH++ N+ G+ +N+RVCNTLIDMY+KCGCLE A +F M+ERTVVSWSAMI G A H
Sbjct: 265 RRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAH 324
Query: 244 GQAEEALKLFSKMSRIGIRPNGVTFIGLLHACSHMGLVDEGHGFFSSMTRDYEIIPQIEH 423
G+AE+AL LF+KM G++PN VTFIG+LHACSHMG+V++G +F+SMTRDY I+P+IEH
Sbjct: 325 GRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEH 384
Query: 424 YGCMVDLLSRSGLLQEAHEFIKNMPIKANAVVWGALLGGCKVHKNVELAEEAIKHLLVLD 603
YGCMVDL SR+GLLQEAHEFI NMPI N VVWGALLGGCKVHKN++LAEEA +HL LD
Sbjct: 385 YGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLD 444
Query: 604 PLNDGYYVVLSNVYADAGRWEDAARVRMLMRDQGVKKTPGWSSITVDNVVHEFVAGDATH 783
PLNDGYYVVLSN+YA+AGRWED ARVR LMRD+GVKKTPGWSSI V+ VV+ FVAGD TH
Sbjct: 445 PLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTH 504
Query: 784 PQAEEIYHKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLINTPP 963
PQ EEI+ W++LL++MK +GYVP+T VVLLDM+ED+KE LYRHSEKLAV FGLI T P
Sbjct: 505 PQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTP 564
Query: 964 G 966
G
Sbjct: 565 G 565
Score = 84.7 bits (208), Expect = 3e-14
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +1
Query: 103 RNVRVCNTLIDMYIKCGCLEIARDVFYEMKERTVVSWSAMIGGCAMHGQAEEALKLFSKM 282
R+V N +I +K G E A +F EM ER V SW++MIGG A G+++EA+ LF +M
Sbjct: 177 RDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEM 236
Query: 283 SRIGIRPNGVTFIGLLHACSHMGLVDEGHGFFSSMTRD-YEIIPQIEHYGCMVDLLSRSG 459
G+ PN VT + +L AC+ MG + G R YE I ++D+ + G
Sbjct: 237 EDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYE--KNIRVCNTLIDMYVKCG 294
Query: 460 LLQEAHEFIKNMPIKANAVVWGALLGGCKVHKNVE 564
L++A NM + V W A++ G H E
Sbjct: 295 CLEDACRIFDNME-ERTVVSWSAMIAGLAAHGRAE 328