BLASTX nr result

ID: Coptis21_contig00001023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001023
         (1691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|2...   361   3e-97
ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266...   347   4e-93
ref|XP_002303427.1| predicted protein [Populus trichocarpa] gi|2...   346   9e-93
ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycin...   333   6e-89
ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycin...   329   2e-87

>ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|222833855|gb|EEE72332.1|
            predicted protein [Populus trichocarpa]
          Length = 487

 Score =  361 bits (927), Expect = 3e-97
 Identities = 211/383 (55%), Positives = 252/383 (65%), Gaps = 19/383 (4%)
 Frame = -2

Query: 1327 KKRKREDV---YEANV--EIISKEK-----VGEKRKSKDDVEEFKVPKEEQGYDDEDKLL 1178
            KKRKR+D+   YEA     ++  E+     VG KRK+ DD  +  V KE +G+DDE KLL
Sbjct: 104  KKRKRDDLEREYEAKKYGPVVDNEENASVVVGAKRKNTDDAADVLVSKESEGFDDESKLL 163

Query: 1177 RTVFVGNLPXXXXXXXXXKEFTKFGDVESVRIRSVPIVDSKTPRKGAIMKGKINESVDSV 998
            RTVFVGNLP         KEF+KFGDVESVRIRSVPI +SK PRKGAI+  K N++VDSV
Sbjct: 164  RTVFVGNLPLKVKKKTLIKEFSKFGDVESVRIRSVPIAESKIPRKGAILLKKFNDNVDSV 223

Query: 997  HAYIVFKDEKSAQASLSHNMAVVGGNHIRVDNACPPRKKLKADSAPVYDNKRTVFVGNLP 818
            HAY+VFK+E+SA+ASLSHNMAVVGGNHIRVD ACPPRKKLK   AP+YDNKRTVFVGNLP
Sbjct: 224  HAYVVFKNEQSAEASLSHNMAVVGGNHIRVDRACPPRKKLKGSDAPLYDNKRTVFVGNLP 283

Query: 817  FDVKDEEIYQLLCGIKQIESDIEGVRVIRDPNSSVGKGIAYVLFKTVEAANFIIXXXXXX 638
            FDVKDEE+YQL  GIK + S IE VRVIRDP+  +GKGIAYVLFKT EAAN +I      
Sbjct: 284  FDVKDEELYQLFTGIKDLASSIEAVRVIRDPHVGLGKGIAYVLFKTREAANLVIKKRNLK 343

Query: 637  XXXXXXXLYHAKADSTPSKKRNLPMPSADNSRGKRLAVTPREKHSDKNKTKNKPVLSYQG 458
                   L HA+ DSTPSK++N       NS  KRLA   R  + + N+   K   SYQG
Sbjct: 344  LRDRELRLSHARQDSTPSKRKNSFAEETANSPNKRLAPDSRAPYHN-NRPDRKAAKSYQG 402

Query: 457  LKASKS-IQKKV----TRKKEFSPAIEA----EVKQXXXXXXXXXXXXXXALNGVGASRP 305
            L+ASKS ++KKV      K++ +P +++    E  Q              AL   GA  P
Sbjct: 403  LRASKSGVEKKVHAPAHSKRDVAPKMKSKPREEKHQGKRPAVAKRKAKATALKDGGALEP 462

Query: 304  TGLKRKPEGRTPDSFHPNKKARK 236
               KRK + RTPDS +  KKARK
Sbjct: 463  ARQKRKLDSRTPDSSNRKKKARK 485


>ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266124 [Vitis vinifera]
          Length = 541

 Score =  347 bits (891), Expect = 4e-93
 Identities = 206/383 (53%), Positives = 251/383 (65%), Gaps = 19/383 (4%)
 Frame = -2

Query: 1327 KKRKREDV---YEANV--EIISKEKVGEKRKSKDDVEEFKVPKEEQGYDDEDKLLRTVFV 1163
            KKRKR+++   YEA     +   E VGEKRKS  +  E  V KE  G+DDE KLLRTVFV
Sbjct: 159  KKRKRDEIEEEYEAQHYGTVAKVEGVGEKRKSVVNPAEMLVSKE--GFDDESKLLRTVFV 216

Query: 1162 GNLPXXXXXXXXXKEFTKFGDVESVRIRSVPIVDSKTPRKGAIMKGKINESVDSVHAYIV 983
            GNLP         KEF+ FG+V+SVRIRSVPI+DSK PRKGAI+  KIN+SVDSVHAYIV
Sbjct: 217  GNLPLKIKKKALLKEFSVFGEVQSVRIRSVPILDSKKPRKGAIISKKINDSVDSVHAYIV 276

Query: 982  FKDEKSAQASLSHNMAVVGGNHIRVDNACPPRKKLKADS-APVYDNKRTVFVGNLPFDVK 806
            FK E+SAQ SLSHNM+V+GGNHIRVD ACPPRKKLK ++ A +YDNKRTVFVGNLPFDVK
Sbjct: 277  FKTEESAQTSLSHNMSVIGGNHIRVDRACPPRKKLKGENDASLYDNKRTVFVGNLPFDVK 336

Query: 805  DEEIYQLLCGIKQIESDIEGVRVIRDPNSSVGKGIAYVLFKTVEAANFIIXXXXXXXXXX 626
             EEIYQL CGI  +ES IE VRV+R+P++SVGKGIAY+LFKT +AAN ++          
Sbjct: 337  AEEIYQLFCGIDSLESSIEAVRVVRNPHTSVGKGIAYILFKTKDAANLVVKKRNLKLRDR 396

Query: 625  XXXLYHAKADS-TPSKKRNLPMPSADNSRGKRLAVTPREKHSDKNKTKNKPVLSYQGLKA 449
               LYHAK  S TPSK+RN     AD S  K+LA   R      N+ K K V+SYQGL+A
Sbjct: 397  DLRLYHAKPSSTTPSKRRNPTPAEADISPAKKLASGSRISLESSNRLKTKSVISYQGLQA 456

Query: 448  SKS-IQKK-----------VTRKKEFSPAIEAEVKQXXXXXXXXXXXXXXALNGVGASRP 305
            SKS + KK            ++ ++ +   E + K+              A  G G S+ 
Sbjct: 457  SKSGVPKKGRLQTKEAVKFKSKNQKENTLKEQQKKRPAVAARKAKINAVNAAGGGGGSKQ 516

Query: 304  TGLKRKPEGRTPDSFHPNKKARK 236
            TG KRK E +TP+    +KKA+K
Sbjct: 517  TGKKRKLESQTPEGGRRSKKAKK 539


>ref|XP_002303427.1| predicted protein [Populus trichocarpa] gi|222840859|gb|EEE78406.1|
            predicted protein [Populus trichocarpa]
          Length = 491

 Score =  346 bits (888), Expect = 9e-93
 Identities = 205/383 (53%), Positives = 245/383 (63%), Gaps = 19/383 (4%)
 Frame = -2

Query: 1327 KKRKREDV---YEANV--EIISKEK-----VGEKRKSKDDVEEFKVPKEEQGYDDEDKLL 1178
            KKRKR+D+   YEA     +++ E+     VG KRK  DD  +  V KE +G+DDE KLL
Sbjct: 108  KKRKRDDLESEYEAKKYGPVVNNEENVRVVVGAKRKKADDAADVLVSKEGEGFDDERKLL 167

Query: 1177 RTVFVGNLPXXXXXXXXXKEFTKFGDVESVRIRSVPIVDSKTPRKGAIMKGKINESVDSV 998
            RTVFVGNLP         KEF+KFG+VES+RIRS+PI +SK PRKGAI+  K N++ DSV
Sbjct: 168  RTVFVGNLPLKVKKKALIKEFSKFGEVESLRIRSMPITESKIPRKGAILLKKFNDNADSV 227

Query: 997  HAYIVFKDEKSAQASLSHNMAVVGGNHIRVDNACPPRKKLKADSAPVYDNKRTVFVGNLP 818
            HAYIVF  E+SA+ASL+HNMAVVGGNHIRVD ACPPRKKLK   AP+YDNKRTVFVGNLP
Sbjct: 228  HAYIVFNTEQSAEASLTHNMAVVGGNHIRVDRACPPRKKLKGSDAPLYDNKRTVFVGNLP 287

Query: 817  FDVKDEEIYQLLCGIKQIESDIEGVRVIRDPNSSVGKGIAYVLFKTVEAANFIIXXXXXX 638
            FDVKDEEIYQL  GIK + S IE VRVIR P+  +GKGIAYVLFKT EAAN +I      
Sbjct: 288  FDVKDEEIYQLFTGIKDLASSIEAVRVIRHPHIGLGKGIAYVLFKTREAANLVIKKRNLK 347

Query: 637  XXXXXXXLYHAKADSTPSKKRNLPMPSADNSRGKRLAVTPREKHSDKNKTKNKPVLSYQG 458
                     HA+ DSTPSK+RN       N   K+LA   R    + N+   K   SYQG
Sbjct: 348  LRDRELRASHARQDSTPSKRRNSFAGETANLSNKKLATDSRTPDRN-NRPDTKAAKSYQG 406

Query: 457  LKASKS-IQKKV----TRKKEFSPAIEA----EVKQXXXXXXXXXXXXXXALNGVGASRP 305
            L+ASKS I+KKV      K+  +  +++    E +Q              AL   GAS P
Sbjct: 407  LRASKSGIEKKVHAPANAKRNGTAKVKSKTQREKRQEKRPAVALRKAKATALKDGGASGP 466

Query: 304  TGLKRKPEGRTPDSFHPNKKARK 236
               KRK + RTPDS +  KKARK
Sbjct: 467  ARQKRKLDSRTPDSSNRKKKARK 489


>ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 515

 Score =  333 bits (855), Expect = 6e-89
 Identities = 197/395 (49%), Positives = 245/395 (62%), Gaps = 31/395 (7%)
 Frame = -2

Query: 1327 KKRKREDV--------YEANVEIISKEKVGEKRKSKDDVEEFKVPKEEQGYDDEDKLLRT 1172
            +KRKR++V        Y A  E I  + VG KRK+ DD  +  V KE  G+D+EDKLLRT
Sbjct: 133  RKRKRDEVEKEWEEKKYGAVEEGIENKTVGIKRKTLDDPADMMVSKE--GFDNEDKLLRT 190

Query: 1171 VFVGNLPXXXXXXXXXKEFTKFGDVESVRIRSVPIVDSKTPRKGAIMKGKINESVDSVHA 992
            VFVGNLP         KEF KFG+VESVRIRSVPI D+K PRKGAI+  KIN++ DSVHA
Sbjct: 191  VFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPIQDTKKPRKGAILAKKINDAADSVHA 250

Query: 991  YIVFKDEKSAQASLSHNMAVVGGNHIRVDNACPPRKKLKADSAPVYDNKRTVFVGNLPFD 812
            YIVFK E+SAQASL+HNM++V GNHIRVD ACPPRKK K +S P+YDNKRTVFVGNLPFD
Sbjct: 251  YIVFKTEQSAQASLAHNMSLVEGNHIRVDRACPPRKKHKGESTPLYDNKRTVFVGNLPFD 310

Query: 811  VKDEEIYQLLCGIKQIESDIEGVRVIRDPNSSVGKGIAYVLFKTVEAANFIIXXXXXXXX 632
            VKDEE+Y+L CGI  +ES IE +RV+RDP+ +VGKGIAYVLFKT EAA F++        
Sbjct: 311  VKDEELYKLFCGISNLESSIEAIRVVRDPHLNVGKGIAYVLFKTKEAAKFVVKKRNLKLR 370

Query: 631  XXXXXLYHAKADSTPSK--------------KRNLPMPSADNSRGKRLAVTPREKHSDKN 494
                 L HAKAD+TPSK              KR  P   A ++  K+ +V  R   S  N
Sbjct: 371  DRELRLCHAKADATPSKRPNPSSAHAPSTPAKRPNPSAHAPSTPAKKFSVASRSPSSSNN 430

Query: 493  --KTKNKPVLSYQGLKASKS-IQKKV------TRKKEFSPAIEAEVKQXXXXXXXXXXXX 341
              K+  K   SYQGL+A+KS + KK+        +K   P++ A   +            
Sbjct: 431  MSKSNRKTNTSYQGLRATKSDVHKKIQGGEKPKERKTKRPSVAARKAK------------ 478

Query: 340  XXALNGVGASRPTGLKRKPEGRTPDSFHPNKKARK 236
               +      +  G+KRK + RTPDS   N+K +K
Sbjct: 479  ANLVKQSDLPKQAGMKRKVDSRTPDSTLRNRKVKK 513


>ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 519

 Score =  329 bits (843), Expect = 2e-87
 Identities = 198/391 (50%), Positives = 242/391 (61%), Gaps = 27/391 (6%)
 Frame = -2

Query: 1327 KKRKREDV--------YEANVEIISKEKVGEKRKSKDDVEEFKVPKEEQGYDDEDKLLRT 1172
            +KRKR +V        Y    E +  + VG KRK+ DD  +  V KE  G+DDEDKLLRT
Sbjct: 137  RKRKRGEVEKDWEEKKYGIVEEGLENKTVGIKRKTLDDPADMMVSKE--GFDDEDKLLRT 194

Query: 1171 VFVGNLPXXXXXXXXXKEFTKFGDVESVRIRSVPIVDSKTPRKGAIMKGKINESVDSVHA 992
            VFVGNLP         KEF KFG+VESVRIRSVPI D+K PRKGAI+  KIN++ DSVHA
Sbjct: 195  VFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPIQDTKKPRKGAILAKKINDAADSVHA 254

Query: 991  YIVFKDEKSAQASLSHNMAVVGGNHIRVDNACPPRKKLKADSAPVYDNKRTVFVGNLPFD 812
            YIVFK E+SAQASLSHNM++V GNHIRVD ACPPRKK K +S P+YD+KRTVFVGNLPFD
Sbjct: 255  YIVFKTEQSAQASLSHNMSLVEGNHIRVDRACPPRKKHKGESTPLYDDKRTVFVGNLPFD 314

Query: 811  VKDEEIYQLLCGIKQIESDIEGVRVIRDPNSSVGKGIAYVLFKTVEAANFIIXXXXXXXX 632
            VKDEE+YQL CGI  +ES IE VRV+RDP+ +VGKGIAYVLFKT EAA F++        
Sbjct: 315  VKDEELYQLFCGISNLESSIEAVRVVRDPHLNVGKGIAYVLFKTKEAAKFVVKKRNLKLR 374

Query: 631  XXXXXLYHAKADSTPSK--------------KRNLPMPSADNSRGKRLAVTPREKHSDKN 494
                 L HAK D+TPSK              KR  P+  A ++  K  +V  R   S  N
Sbjct: 375  DRELRLSHAKVDATPSKRPNPSSAHAPSTPAKRPYPLAHAPSTPAKEFSVASRSPSSSNN 434

Query: 493  KTKN--KPVLSYQGLKASKS-IQKKVTRKKEFSPAIEAEVKQXXXXXXXXXXXXXXALNG 323
             +K+  K   SYQGL+A+KS + KK+   ++         K+              A  G
Sbjct: 435  MSKSNRKTNASYQGLRATKSDVHKKIQGGEK--------PKERMTKRPSVAARKAKAKLG 486

Query: 322  VGASRP--TGLKRKPEGRTPDSFHPNKKARK 236
              +  P   G+KRK + RTPDS   N+K +K
Sbjct: 487  KESDLPKQAGMKRKLDSRTPDSTLRNRKVKK 517


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